Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d041767_T004
CDS Infomation

cds chromosome:B73_RefGen_v4:3:136598762:136603856:-1 gene:Zm00001d041767 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Alfin-like-transcription factor 4 description:PHD finger protein ALFIN-LIKE 6
Sequence

ATGGACGGAGGAGCCGGCTTTCCGGGCACGCAGCCGGTCTCCCGCTCGCCGGAGGACGTC
TTCCGGGACTACCGCGCGCGCCAGGCCGGCCTGATCAGGGCGCTCACCACCGATGTGGAG
AAGTTCTACGTGATGTGCGACCCAGAGAAGGAGAACTTATGTTTATATGGACTTCCTAAT
GAGACATGGGAAATAAACTTGCCTGCTGAAGAGGTCCCTCCTGAACTGCCAGAGCCAGCT
CTTGGAATTAATTTTGCTCGTGATGGGATGGATGAAAAAGATTGGCTATCACTTGTTGCA
GTGCATAGTGATTCTTGGCTAATGTCTGTTGCATTTTATTTTGGAGCAAGGTTTGGATTC
GATAAAGAATCCAGGAAACGTCTCTTCACCATGATCAATAACCTTCCCAGCATATATGAG
GTTGTCACAGGAACAGCCAAGAAAGAGCCCAAAGAAAAAACTCCTAAAAGCAACATTAAG
ACTAACAAATCTGGCTCAAAGCCCTCGCGCCATGCGGAACCCAACTCAAGGGTCCCAAAG
ATGCCACCTCCAAAGGACGAGGAGAGTGAAGAGGAGGAAGGGGAACCACAGGAAGACCAG
GAGAGTGCGCTGTGTGGCGCATGTGGCCTAGGTTATGACGACTTCTGGATCTGCTGCGAC
CTATGCGAGACATGGTTCCACGGCAAGTGTGTTAAGATCACCCCAGCTAAAGCGGACCAC
ATCAAGCAGTATAAGTGCCCCTCCTGCACGGGAAGCAAGAGGGCCAAGGTTTGA

Peptide Sequence

PEP ID

Zm00001d041767_P004
PEP Infomation

pep chromosome:B73_RefGen_v4:3:136598762:136603856:-1 gene:Zm00001d041767 transcript:Zm00001d041767_T004 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Alfin-like-transcription factor 4 description:PHD finger protein ALFIN-LIKE 6
Sequence

MDGGAGFPGTQPVSRSPEDVFRDYRARQAGLIRALTTDVEKFYVMCDPEKENLCLYGLPN
ETWEINLPAEEVPPELPEPALGINFARDGMDEKDWLSLVAVHSDSWLMSVAFYFGARFGF
DKESRKRLFTMINNLPSIYEVVTGTAKKEPKEKTPKSNIKTNKSGSKPSRHAEPNSRVPK
MPPPKDEESEEEEGEPQEDQESALCGACGLGYDDFWICCDLCETWFHGKCVKITPAKADH
IKQYKCPSCTGSKRAKV

Transcript Sequence

Transcript ID

Zm00001d041767_T004
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:136598762:136603856:-1 gene:Zm00001d041767 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Alfin-like-transcription factor 4 description:PHD finger protein ALFIN-LIKE 6
Sequence

CGAGAGAAGTCTTCTCTGTCACAGCGCCGACGCTTCTCAATTCCTTCCAATCGGCACCTC
GCCGTCCTCGTGTGCAATCCCCAGCTCTCCTCGCCCCTCCCTCCCAAACTCCAGCGGCCC
CCCTGACCAAGCTCCGGGGACGGATGGACGGAGGAGCCGGCTTTCCGGGCACGCAGCCGG
TCTCCCGCTCGCCGGAGGACGTCTTCCGGGACTACCGCGCGCGCCAGGCCGGCCTGATCA
GGGCGCTCACCACCGATGTGGAGAAGTTCTACGTGATGTGCGACCCAGAGAAGGAGAACT
TATGTTTATATGGACTTCCTAATGAGACATGGGAAATAAACTTGCCTGCTGAAGAGGTCC
CTCCTGAACTGCCAGAGCCAGCTCTTGGAATTAATTTTGCTCGTGATGGGATGGATGAAA
AAGATTGGCTATCACTTGTTGCAGTGCATAGTGATTCTTGGCTAATGTCTGTTGCATTTT
ATTTTGGAGCAAGGTTTGGATTCGATAAAGAATCCAGGAAACGTCTCTTCACCATGATCA
ATAACCTTCCCAGCATATATGAGGTTGTCACAGGAACAGCCAAGAAAGAGCCCAAAGAAA
AAACTCCTAAAAGCAACATTAAGACTAACAAATCTGGCTCAAAGCCCTCGCGCCATGCGG
AACCCAACTCAAGGGTCCCAAAGATGCCACCTCCAAAGGACGAGGAGAGTGAAGAGGAGG
AAGGGGAACCACAGGAAGACCAGGAGAGTGCGCTGTGTGGCGCATGTGGCCTAGGTTATG
ACGACTTCTGGATCTGCTGCGACCTATGCGAGACATGGTTCCACGGCAAGTGTGTTAAGA
TCACCCCAGCTAAAGCGGACCACATCAAGCAGTATAAGTGCCCCTCCTGCACGGGAAGCA
AGAGGGCCAAGGTTTGATCCACGATCCAAGGAGCCTTTGACGAGAGCTGTAAGCTGACTC
TTCGTGCTAGGGCAGCTAATAGATTCGAATGCTTGTTTTGATACAAATTATGAGTACTGA
CGAACCGTAAACTGATGTAGTTTGTGTGGCCCTCAAAGCATCTATGTCCTGACTTGTGTG
GTTTAGGTTTCCTTTGGCACAGTTTCTAATATGAGTTTTGTCAATTAGAGAGAA