Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d041759_T005
CDS Infomation

cds chromosome:B73_RefGen_v4:3:136197005:136204222:1 gene:Zm00001d041759 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transducin/WD40 repeat-like superfamily protein
Sequence

ATGCTCTTGATATACGACAGAACACCAAGTTATGTCCCATTGAAGATATTATCTATTGAA
GATGGGAAACAACTGAAATTTTTTAAGCACTTGTTACATCGCAACAAGAAAATTGATTTC
ATTGAGCAGTTCAATGAGAAGCTCCTTGTCAAGCAAGAGGACGAAAACTTCCAGATACTT
GATGTGCGGAGTTCTGAGCTAATTGAAGTCAATGTCTCCAAGTTTATGACCCCTTCAGCA
TTCATTTTTCTTTATGAGAACAATCTCTTCTTGACATTCCGAAACAGAACAGTCGCTGTA
TGGAACTTCCGAGGAGATCTTGTGACTTCATTTGAGGACCATTTACTTTGGCATCATGAT
TGTAGCACCAACAATATTTACATCACTAGCGACCAGGATCTTATTATCTCATACTGCAAA
TCGGAGGCAGTGGCTGAGGATGGTACAGTTGTTCCAGTTGGATCCATCAACATGAGCGAG
ATCATGACTGGCAAGTGTATCGCCAAGATTACTGCCAACGATCCTGCCCTAAGTGCGCCC
CCTCGCAGAAATGGTCGCAGCAAGCGGCGGTCCTCGGTCTGGAGCACCGTTCCAGAAGCT
CTGGAGGACGTCACGGCACTGTTCTATGACGAGGACAGGAATGAGATCTACACCGGCAAC
AGTCATGGACTGGTGCATGTATGGTCTAACTAG

Peptide Sequence

PEP ID

Zm00001d041759_P005
PEP Infomation

pep chromosome:B73_RefGen_v4:3:136197005:136204222:1 gene:Zm00001d041759 transcript:Zm00001d041759_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transducin/WD40 repeat-like superfamily protein
Sequence

MLLIYDRTPSYVPLKILSIEDGKQLKFFKHLLHRNKKIDFIEQFNEKLLVKQEDENFQIL
DVRSSELIEVNVSKFMTPSAFIFLYENNLFLTFRNRTVAVWNFRGDLVTSFEDHLLWHHD
CSTNNIYITSDQDLIISYCKSEAVAEDGTVVPVGSINMSEIMTGKCIAKITANDPALSAP
PRRNGRSKRRSSVWSTVPEALEDVTALFYDEDRNEIYTGNSHGLVHVWSN

Transcript Sequence

Transcript ID

Zm00001d041759_T005
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:136197005:136204222:1 gene:Zm00001d041759 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transducin/WD40 repeat-like superfamily protein
Sequence

GAAGGAACCAGTTAGATGCTGGGTTTCCCCTCTTTGAATCAGAGTCTCTGAAATGGCCTG
GATTTGTGGAGTTTGATGACGTAAATGGAAAAGTACTCACATATTCAGCGCAGGATGGTA
TATATAAGGTCTTTGACTTGAAGAACTACTACTTCCTATATTCAATACCAGATGAAAATG
TGCAGGAGATAAAGATCAGTCCAGGAATCATGCTCTTGATATACGACAGAACACCAAGTT
ATGTCCCATTGAAGATATTATCTATTGAAGATGGGAAACAACTGAAATTTTTTAAGCACT
TGTTACATCGCAACAAGAAAATTGATTTCATTGAGCAGTTCAATGAGAAGCTCCTTGTCA
AGCAAGAGGACGAAAACTTCCAGATACTTGATGTGCGGAGTTCTGAGCTAATTGAAGTCA
ATGTCTCCAAGTTTATGACCCCTTCAGCATTCATTTTTCTTTATGAGAACAATCTCTTCT
TGACATTCCGAAACAGAACAGTCGCTGTATGGAACTTCCGAGGAGATCTTGTGACTTCAT
TTGAGGACCATTTACTTTGGCATCATGATTGTAGCACCAACAATATTTACATCACTAGCG
ACCAGGATCTTATTATCTCATACTGCAAATCGGAGGCAGTGGCTGAGGATGGTACAGTTG
TTCCAGTTGGATCCATCAACATGAGCGAGATCATGACTGGCAAGTGTATCGCCAAGATTA
CTGCCAACGATCCTGCCCTAAGTGCGCCCCCTCGCAGAAATGGTCGCAGCAAGCGGCGGT
CCTCGGTCTGGAGCACCGTTCCAGAAGCTCTGGAGGACGTCACGGCACTGTTCTATGACG
AGGACAGGAATGAGATCTACACCGGCAACAGTCATGGACTGGTGCATGTATGGTCTAACT
AGATGGTAACATGTCCATACATCTCGCCCTTTTGATTTGACTTGGCTAGCCTGACTGCAT
TCTGTATAATCCCCGGCTTGGGGCTCACCTAGATTTTGTATTTGGCAATAGAATGTGTTT
CCTTGAGAAATTGTGAATGCAAATCGTTATAAATATCTCATGTTCGTCTACCTTGTTCGA
GTAACATAGAAGAAATTAGCCTCCAAATCTAACTTTGCTGGATACACATCCTGCAGCAAG
ATACCGACGATCTGGAGCTCTG