Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d041725_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:3:135291605:135293112:-1 gene:Zm00001d041725 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LIM-transcription factor 7 description:Pollen-specific protein SF3

Sequence

ATGGCGACCTCCTTCCAGGGAACCACCACCAAGTGCACCGCCTGCGACAAGACGGTGTAC
CTCGTCGACAAGCTCACCGCCGACAACCGCGTCTACCACAAGGCCTGCTTCCGCTGCCAC
CACTGCAAGGGCACACTCAAGCTCGCCAACTACAACTCCTTCGACGGAGTGCTCTACTGC
AGGCCTCACTTCGACCAGCTCTTCAAGAGGACCGGGAGCTTGGACAAGAGCTTCCAAGGA
ACCCCAAAGGTTGTCAAGCCAGAAAGAAACGTTGGGAATGAGAATGCTACTAAAGTCTCG
AGCGCCTTCGCTGGCACCAGGGAGAAGTGTGTCGGATGCAGCAAGACAGTCTATCCAATT
GAGAGGGTTACTGTGAACAACACCATGTACCACAAGTGCTGCTTCAAGTGCTGCCATGGA
GGATGCACCATCAGCCCTTCTAACTACATCGCGCACGAGGGGAAGCTCTACTGCAAGCAC
CACCACGTCCAGCTGATCAAGGAGAAAGGGAACTTCAGCCAGCTCGAGAATGACCACGAG
AAGACATCGCAGGCTGGGTCGCTGGAGGACGACGAAGAAGAAGAGTATTAA

Peptide Sequence

PEP ID

Zm00001d041725_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:3:135291605:135293112:-1 gene:Zm00001d041725 transcript:Zm00001d041725_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LIM-transcription factor 7 description:Pollen-specific protein SF3

Sequence

MATSFQGTTTKCTACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLANYNSFDGVLYC
RPHFDQLFKRTGSLDKSFQGTPKVVKPERNVGNENATKVSSAFAGTREKCVGCSKTVYPI
ERVTVNNTMYHKCCFKCCHGGCTISPSNYIAHEGKLYCKHHHVQLIKEKGNFSQLENDHE
KTSQAGSLEDDEEEEY

Transcript Sequence

Transcript ID

Zm00001d041725_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:135291605:135293112:-1 gene:Zm00001d041725 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LIM-transcription factor 7 description:Pollen-specific protein SF3

Sequence

AAGGCCGGCCGCTGGGGAGTCTGGAACATACCTCTAGCAGCCTCGCCTCTGTAGCTAGGC
ATTGTAGTAGAGGGGGGAAAGAAGAAGACTAGAAGAAAAGGGCCATGGCGACCTCCTTCC
AGGGAACCACCACCAAGTGCACCGCCTGCGACAAGACGGTGTACCTCGTCGACAAGCTCA
CCGCCGACAACCGCGTCTACCACAAGGCCTGCTTCCGCTGCCACCACTGCAAGGGCACAC
TCAAGCTCGCCAACTACAACTCCTTCGACGGAGTGCTCTACTGCAGGCCTCACTTCGACC
AGCTCTTCAAGAGGACCGGGAGCTTGGACAAGAGCTTCCAAGGAACCCCAAAGGTTGTCA
AGCCAGAAAGAAACGTTGGGAATGAGAATGCTACTAAAGTCTCGAGCGCCTTCGCTGGCA
CCAGGGAGAAGTGTGTCGGATGCAGCAAGACAGTCTATCCAATTGAGAGGGTTACTGTGA
ACAACACCATGTACCACAAGTGCTGCTTCAAGTGCTGCCATGGAGGATGCACCATCAGCC
CTTCTAACTACATCGCGCACGAGGGGAAGCTCTACTGCAAGCACCACCACGTCCAGCTGA
TCAAGGAGAAAGGGAACTTCAGCCAGCTCGAGAATGACCACGAGAAGACATCGCAGGCTG
GGTCGCTGGAGGACGACGAAGAAGAAGAGTATTAATTAATCGCTGAGCAAAAATACATAC
CACCAGAAGAATAATTAATCTTCCTTCTTGCACTATATATTTCTGTGCCATTTCAGTCTT
ACCAATGGAGATCATATGTGCGTTCAGAGAACAATGATATCGTTTTCTTGTATCTGCATG
TAAACCACGTCTACTACCTGATTTCACCATTTGCATTG