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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d041711_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:3:134550012:134554530:1 gene:Zm00001d041711 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:auxin binding protein1 description:Auxin-binding protein 1

Sequence

ATGGCGCCGGATCTAAGCGAACTCGCCGCCGCCGCTCCAGCCCGTGGCGCCTACCTCGCC
GGCGTCGGTGTCGCGGTCCTCCTCGCTGCCTCCTTCCTCCCAGTAGCCGAGTCGTCCTGC
GTGCGAGATAACTCATTGGTGAGAGACATAAGCCAAATGCCGCAAAGCAGCTATGGGATT
GAAGGATTGTCACATATAACAGTTGCTGGTGCGCTCAATCATGGGATGAAGGAGGTGGAA
GTGTGGCTTCAGACAATAAGTCCAGGTCAAAGGACGCCAATCCACAGGCATTCCTGTGAA
GAAGTTTTCACTGTCCTCAAAGGGAAGGGTACGCTCTTGATGGGATCAAGCTCACTAAAG
TACCCAGGGCAGCCACAGGAAATTCCTTTCTTTCAGAATACCACATTTTCAATCCCTGTA
AATGATCCACACCAGATTTCAACATGTAAATTTATTTTGGTGGGTAGGAAATTGATCTTT
TTGTTAATGTATACATCATCTTTCTCTTGCAGATTTTTATATGATGATTGGAGCATGCCT
CATACAGCCGCGGTACTGAAATTCCCCTTCGTCTGGGATGAGGACTGCTTCGAAGCAGCA
AAAGACGAACTCTAG

Peptide Sequence

PEP ID

Zm00001d041711_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:3:134550012:134554530:1 gene:Zm00001d041711 transcript:Zm00001d041711_T003 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:auxin binding protein1 description:Auxin-binding protein 1

Sequence

MAPDLSELAAAAPARGAYLAGVGVAVLLAASFLPVAESSCVRDNSLVRDISQMPQSSYGI
EGLSHITVAGALNHGMKEVEVWLQTISPGQRTPIHRHSCEEVFTVLKGKGTLLMGSSSLK
YPGQPQEIPFFQNTTFSIPVNDPHQISTCKFILVGRKLIFLLMYTSSFSCRFLYDDWSMP
HTAAVLKFPFVWDEDCFEAAKDEL

Transcript Sequence

Transcript ID

Zm00001d041711_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:134550012:134554530:1 gene:Zm00001d041711 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:auxin binding protein1 description:Auxin-binding protein 1

Sequence

ACCCTAGCCTCTATCTCATTCCACTCCGACATTCACGTGCAGCTGTCGGGAGCAGGCAAT
GGCGCCGGATCTAAGCGAACTCGCCGCCGCCGCTCCAGCCCGTGGCGCCTACCTCGCCGG
CGTCGGTGTCGCGGTCCTCCTCGCTGCCTCCTTCCTCCCAGTAGCCGAGTCGTCCTGCGT
GCGAGATAACTCATTGGTGAGAGACATAAGCCAAATGCCGCAAAGCAGCTATGGGATTGA
AGGATTGTCACATATAACAGTTGCTGGTGCGCTCAATCATGGGATGAAGGAGGTGGAAGT
GTGGCTTCAGACAATAAGTCCAGGTCAAAGGACGCCAATCCACAGGCATTCCTGTGAAGA
AGTTTTCACTGTCCTCAAAGGGAAGGGTACGCTCTTGATGGGATCAAGCTCACTAAAGTA
CCCAGGGCAGCCACAGGAAATTCCTTTCTTTCAGAATACCACATTTTCAATCCCTGTAAA
TGATCCACACCAGATTTCAACATGTAAATTTATTTTGGTGGGTAGGAAATTGATCTTTTT
GTTAATGTATACATCATCTTTCTCTTGCAGATTTTTATATGATGATTGGAGCATGCCTCA
TACAGCCGCGGTACTGAAATTCCCCTTCGTCTGGGATGAGGACTGCTTCGAAGCAGCAAA
AGACGAACTCTAGGTCACAAGTGTTTCCTGCAATTTATCTGCTTCATCCATGATCCTGCT
GGTGCTGGACTACTACAATTCTCAGCACTAGTTGTAATAAAGCCAGTGCGCTTTTCATGT
ATAATTCTGTATTGTGGCTCGCGAAAATAAAATTTGGCAACGGTTTATGAACTTATGCGC
TTGTGGAGTTGATCCAATGTTCACCGTTTCAAGA