Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d041698_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:3:133863278:133865221:-1 gene:Zm00001d041698 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein RTF1 homolog
Sequence

ATGTCGAAGTCGAACCTAGATGATCTGCTTCTGCAGGCAGCCGGCCGGACGGGGAAGAAC
CACTCCCGGCCGAGCAACCCGCGGTGGAACTCTGGGGGAAGCGGCTCCGACGGCTTCGAC
GACGACGACTCGGACGCCGCGCCGACCTACTCGAGGAAGAAGCCTTCGTCGCAGGTTCCG
CTCAAGAAGCGGCACCAGCCAGAGCAGGGCGGCCGGCGTGGCAGTGGCGGGTGGAAGGAC
GAGGACGACGAGGACGAAGACGGGCGTCGCAGTGGCGGGGAGGACTCGGACAGCGCCCCT
TCGGTGGGGAGTGACCTATACAAGGATGAGGACGACAAGGAGCGTCTGGAGAACATGTCT
GAGCTGCAAAGGGAGATGATCCTGGCTGATCGGGGCACCCGCCTCGATGATTACAAGCTC
AAGCAGCGGGCACGAGCGTCCTCGTCCAAGACGGACAAGGTGGGCGCACGGAAGGATAGC
AGTCCACCCCCGCCGCCCAGCCGGATGCGGTCTTCAACCCGAGCTGACAAGTCTGGGTCC
GCAGCTAAGAGCGCGTTGGACGAGCTGCGGGCAAAGCAGCGGATGCGGCAACAGGCTCCG
GAGGCACGCAGGTTCACGGACCTGCTCCCACGTAGTGGCTCACCAACTAGGCGCAGGGCT
GGGAGCCCTCCAAGTGATGGGAGCAACGATGGGGATGGCAGGGGGAGGCCTAATGACCAT
GGGAGGATCGCTGACGATAGCAGGGATGACGAATTTGATGAGTCGCCGAGTAGGCTTGAT
CCACTCAAGTTTGATGACGTGAAGAGTATTACCCTCAGGAGGTCAAAGCTGGTGAAATGG
TTCATGGAGCCGTTCTTTGATGATCTAATTTCTGGGTGTTTTGTGCGGCTAGGTATTGGC
CAGACAAAGAATGGGACCCCGAGGTACAGGCTGTGCATAGTGAGGAACGTGGATGCAAGC
GATCCAGACCGGAATTACAAACTGGAAAGCTACTCGACATGCAAATATCTCAATGTTGTG
TGGGATAGTGAGGCTAATGCTGCGCGGTGGCAGATGACTCAAGTATCGGATTCCCCACCC
AACGAAGAAGAGTTCAAGGAATGGCTGCAAGAGGCAGAGAAGCATGGTGCACGTATACCG
ACCCGGCAGGAAGTGCTGGACAAGAAAGAAGCCATCCAGGAGGCCTATAATTTTGTGTAT
TCAGCTGCAACTGTACAGCAGATGCTGCGAGAGAAATCAGCTGTGAGACGCCCTATCAAT
ATTGCTGCTGAGAAGGATCGGTTGAGGAGTGAGTTGGAGATGGCCCTGAGCCGTAGGAAT
GAAGCTGAAGCAGAGAGGATTCGTGTGAAGCTGAAAAATCTGCAAAGCAGGCCACAACCG
GTGTCAAAGGATAATAAGGCTGCAAAGTTGGAGGCTATGAACCGGAAGAATCGTGCTGAT
AACTTCAAGAACGCTTCGGAACTGAAACCTGTAAATACATCTTTGAAGGCTGGAGAGGCT
GGTTATGACCCTTTCTCGAGGAGGTGGACAAGATCAAGAAACTATTATGCATCAAAGCCA
GGAGGAGATAATGCTGAAGAAACTGCCAACAAGTCCAGTAGTATTGTAGAGCCTAGCAAT
GGAGATATAAAGAGCAAGGCTCAGACTGGTACATCAGCCACAACTGCAGCTCAAGTGGCA
GCAGCTGACGCCGGGAAGCTCACTGATACTAATGCACCAGTGGATCTGGGAACAGAATCG
AATGTGATGCATACATTTGAACTTCCTATATCATTGTCTGCTTTGCAAGAATTTGGTGGA
GCCAAGGGCCTGTTTGATGGTTACATGGCAAGGAGGCAGAAGATAGAAGCTACAATGGGG
TACAAGGTGCCTGACAACGATGGAAGGAGGCATGCTTTAACCTTGAGTGTGAGTGATTAC
AAAAGGCGGCGGGGTCTCCTCTGA

Peptide Sequence

PEP ID

Zm00001d041698_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:3:133863278:133865221:-1 gene:Zm00001d041698 transcript:Zm00001d041698_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein RTF1 homolog
Sequence

MSKSNLDDLLLQAAGRTGKNHSRPSNPRWNSGGSGSDGFDDDDSDAAPTYSRKKPSSQVP
LKKRHQPEQGGRRGSGGWKDEDDEDEDGRRSGGEDSDSAPSVGSDLYKDEDDKERLENMS
ELQREMILADRGTRLDDYKLKQRARASSSKTDKVGARKDSSPPPPPSRMRSSTRADKSGS
AAKSALDELRAKQRMRQQAPEARRFTDLLPRSGSPTRRRAGSPPSDGSNDGDGRGRPNDH
GRIADDSRDDEFDESPSRLDPLKFDDVKSITLRRSKLVKWFMEPFFDDLISGCFVRLGIG
QTKNGTPRYRLCIVRNVDASDPDRNYKLESYSTCKYLNVVWDSEANAARWQMTQVSDSPP
NEEEFKEWLQEAEKHGARIPTRQEVLDKKEAIQEAYNFVYSAATVQQMLREKSAVRRPIN
IAAEKDRLRSELEMALSRRNEAEAERIRVKLKNLQSRPQPVSKDNKAAKLEAMNRKNRAD
NFKNASELKPVNTSLKAGEAGYDPFSRRWTRSRNYYASKPGGDNAEETANKSSSIVEPSN
GDIKSKAQTGTSATTAAQVAAADAGKLTDTNAPVDLGTESNVMHTFELPISLSALQEFGG
AKGLFDGYMARRQKIEATMGYKVPDNDGRRHALTLSVSDYKRRRGLL

Transcript Sequence

Transcript ID

Zm00001d041698_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:133863278:133865221:-1 gene:Zm00001d041698 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein RTF1 homolog
Sequence

ATGTCGAAGTCGAACCTAGATGATCTGCTTCTGCAGGCAGCCGGCCGGACGGGGAAGAAC
CACTCCCGGCCGAGCAACCCGCGGTGGAACTCTGGGGGAAGCGGCTCCGACGGCTTCGAC
GACGACGACTCGGACGCCGCGCCGACCTACTCGAGGAAGAAGCCTTCGTCGCAGGTTCCG
CTCAAGAAGCGGCACCAGCCAGAGCAGGGCGGCCGGCGTGGCAGTGGCGGGTGGAAGGAC
GAGGACGACGAGGACGAAGACGGGCGTCGCAGTGGCGGGGAGGACTCGGACAGCGCCCCT
TCGGTGGGGAGTGACCTATACAAGGATGAGGACGACAAGGAGCGTCTGGAGAACATGTCT
GAGCTGCAAAGGGAGATGATCCTGGCTGATCGGGGCACCCGCCTCGATGATTACAAGCTC
AAGCAGCGGGCACGAGCGTCCTCGTCCAAGACGGACAAGGTGGGCGCACGGAAGGATAGC
AGTCCACCCCCGCCGCCCAGCCGGATGCGGTCTTCAACCCGAGCTGACAAGTCTGGGTCC
GCAGCTAAGAGCGCGTTGGACGAGCTGCGGGCAAAGCAGCGGATGCGGCAACAGGCTCCG
GAGGCACGCAGGTTCACGGACCTGCTCCCACGTAGTGGCTCACCAACTAGGCGCAGGGCT
GGGAGCCCTCCAAGTGATGGGAGCAACGATGGGGATGGCAGGGGGAGGCCTAATGACCAT
GGGAGGATCGCTGACGATAGCAGGGATGACGAATTTGATGAGTCGCCGAGTAGGCTTGAT
CCACTCAAGTTTGATGACGTGAAGAGTATTACCCTCAGGAGGTCAAAGCTGGTGAAATGG
TTCATGGAGCCGTTCTTTGATGATCTAATTTCTGGGTGTTTTGTGCGGCTAGGTATTGGC
CAGACAAAGAATGGGACCCCGAGGTACAGGCTGTGCATAGTGAGGAACGTGGATGCAAGC
GATCCAGACCGGAATTACAAACTGGAAAGCTACTCGACATGCAAATATCTCAATGTTGTG
TGGGATAGTGAGGCTAATGCTGCGCGGTGGCAGATGACTCAAGTATCGGATTCCCCACCC
AACGAAGAAGAGTTCAAGGAATGGCTGCAAGAGGCAGAGAAGCATGGTGCACGTATACCG
ACCCGGCAGGAAGTGCTGGACAAGAAAGAAGCCATCCAGGAGGCCTATAATTTTGTGTAT
TCAGCTGCAACTGTACAGCAGATGCTGCGAGAGAAATCAGCTGTGAGACGCCCTATCAAT
ATTGCTGCTGAGAAGGATCGGTTGAGGAGTGAGTTGGAGATGGCCCTGAGCCGTAGGAAT
GAAGCTGAAGCAGAGAGGATTCGTGTGAAGCTGAAAAATCTGCAAAGCAGGCCACAACCG
GTGTCAAAGGATAATAAGGCTGCAAAGTTGGAGGCTATGAACCGGAAGAATCGTGCTGAT
AACTTCAAGAACGCTTCGGAACTGAAACCTGTAAATACATCTTTGAAGGCTGGAGAGGCT
GGTTATGACCCTTTCTCGAGGAGGTGGACAAGATCAAGAAACTATTATGCATCAAAGCCA
GGAGGAGATAATGCTGAAGAAACTGCCAACAAGTCCAGTAGTATTGTAGAGCCTAGCAAT
GGAGATATAAAGAGCAAGGCTCAGACTGGTACATCAGCCACAACTGCAGCTCAAGTGGCA
GCAGCTGACGCCGGGAAGCTCACTGATACTAATGCACCAGTGGATCTGGGAACAGAATCG
AATGTGATGCATACATTTGAACTTCCTATATCATTGTCTGCTTTGCAAGAATTTGGTGGA
GCCAAGGGCCTGTTTGATGGTTACATGGCAAGGAGGCAGAAGATAGAAGCTACAATGGGG
TACAAGGTGCCTGACAACGATGGAAGGAGGCATGCTTTAACCTTGAGTGTGAGTGATTAC
AAAAGGCGGCGGGGTCTCCTCTGA