Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d041647_T009
CDS Infomation	cds chromosome:B73_RefGen_v4:3:131547321:131554249:1 gene:Zm00001d041647 gene_biotype:protein_coding transcript_biotype:protein_coding description:Auxilin-related protein 1
Sequence	ATGGGGCCAGCGGCGGGTACTGGGTTTGATTATTTGATCCCAGGCTTTGGCGGGAGGAGC TCCCCGCGGCAAAGGGATACTGTTGGTGCAAAACAACAGAAGATTTCCATGTCAACATCT AAGCAACCAGCTAGCTTAAGCGACCCCTTTGTTGTTCTCGAAACAACTTCATCCTCAGCC CATCCATTCGCAGATCCCTTGGATGAATTTGGTAAAGCTGCAAAATATCAAGGGAAAAGC CGTGAAAGTACTAACGTTGGGAGCAATCTGTTTGAGGATTCAAGCACTTCCATCCAGGCT CCAAAATCTGAACCTATTTTTACCTCAGAGGTGGACAATGGCTTGAAAGATAAGAATGAG TCTAGCAGAGCCCGAGACGCAAATCCTGTACAGAGTTTTTCTAAAGGAAACTCCTCCCAA CAACCTTCTGTAGAGGATTTTGAAAATATCTTTTCTAAGCCGCAGTCTGCCAGATATGCT GATGTCCATGTTGACATTGGCTCAGATAAATATAGTGGGAATGGTATAAACGACCAGTCA CCTAGATCTGATGAATCCGAAGATGAGATATGGCTTACAGCTTCTGAGATTCCCCTCTTC ACACAGCCAACTAGTGCCCCACCACCTTCAAGGCCACCACCACCTCTTGCAGCTAAGCAA AAAAAACATGGATCAAAATCAAAAAGAAAAGATGATGAACATCTAAAGCAGTCTAGGAAA AACAATGATCATCAAAGAAGTTCGTCAAATCATGCTGGTGTTTCTACAGTAGATGAACTA GAAGATTTTGCCATGGGTAAGCCTCAGAGTGTGCATGCTTTAAATGCGGAAGAATTTGAG AGAAGTACAGCAGCAGCAGCATCTGCAGCTGCTATGAAAGAGGCCATGGATAAAGCAGAG GCAAAGTTCAAACATGCAAAGGAGGTACGAGAGAGAGAGCGTGATGCGAAGATTAGAAAT AGAGAACAACGGGAACAAGATAGTGTAACAAGGTCGTATGCCCAGGATCGTGAGGACAAA GAGAGAAAGGAAAGACTAGAACAAGAAAGAGAGATGAAGCAAAATGAGGAAAAGGAAAGA GAGCAAAGAAGACTTGAAGAGGAAAGAGAACTTGAGCGACATAAAGAAAGAGAAAGAGCT AGGCAAGCAGTGGAGAGGGCTACAAAGGAGGCACGGGAAAGAGCAGCTGTTGAAGCTCGT GCAAAAGCGGAGAGAGAGGCACGCCAACGTTCAGAACGTGCTGCTGTGCAAAGAGCCCAA CAGGAAGCACGTGAGAGGGCAGCAGTGGAGGCTAAAGAGCGAGCAGAGAGGGCTACTGCA GAAGCAAAGGAAAGGGCTGCTGCTGAAGGTAAGGAAAAAGCTGCTAGTCAAGCCAGGGAT AGGGCTGCAGCAGAAAGAGCTGCTGTGGAGAGAGCTCAGCAAGAAGCGAGGAAGAGAGCT GAACGAGCAGCAGTGGAAAGGGCTGCTGCTGAGGCTCGGGAAAGACAGGCTGCTGCTGCA AGAGATAAAACGAGCAAACCAGATGATCTAGAGTCCTTCTTTGGTATGGGTGCTCGAGCT AATAGTGCTCCGAAGCAAAGGGCTCCGACTGTGGACTCTATGTTTCATTCTCAAACGCAA AATAGAGGGAGTTCCACTTCGACATCAATGAAAAAGGCATCATCAACAACAAATATTGCT GATGACTTGTCTGCGATATTTGGAGGAGCTCCTACATCAGAAGAATTTCAAGAAGTAGAT GGGGAGAGCGAAGAAAGAAGACGCGCTAGGATGGAACGGCATCAAAGAACTCGTGAACGA GCGGCAAAGGCTTTGGCTGAGAAGAATGAACGCGACATGCAGCAACAAAGAGAGCAGGCT GAAAGACATAGGCTTGCGGAAACACTGGACTTTGAGATTAAGCGCTGGGCTGCTGGAAAA GAAGGCAATTTGCGTGCATTGCTATCAACTTTACAATATGTTCTTTGGCCAGAATGTGGG TGGCAACCTGTATCCCTCACTGATTTGATCACTGCTGCTGCTGTTAAAAAAGTGTACAGA AAAGCAACACTGTGTATCCATCCTGACAAGGTGCAGCAAAAGGGTGCAAATCTCCAACAG AAATATATCGCTGAGAAGGTTTTTGATCTCCTTAAGGAGGCGTGGAACAAACTCAACTCT GAAGAGCTCTTCTAA

Peptide Sequence

PEP ID	Zm00001d041647_P009
PEP Infomation	pep chromosome:B73_RefGen_v4:3:131547321:131554249:1 gene:Zm00001d041647 transcript:Zm00001d041647_T009 gene_biotype:protein_coding transcript_biotype:protein_coding description:Auxilin-related protein 1
Sequence	MGPAAGTGFDYLIPGFGGRSSPRQRDTVGAKQQKISMSTSKQPASLSDPFVVLETTSSSA HPFADPLDEFGKAAKYQGKSRESTNVGSNLFEDSSTSIQAPKSEPIFTSEVDNGLKDKNE SSRARDANPVQSFSKGNSSQQPSVEDFENIFSKPQSARYADVHVDIGSDKYSGNGINDQS PRSDESEDEIWLTASEIPLFTQPTSAPPPSRPPPPLAAKQKKHGSKSKRKDDEHLKQSRK NNDHQRSSSNHAGVSTVDELEDFAMGKPQSVHALNAEEFERSTAAAASAAAMKEAMDKAE AKFKHAKEVRERERDAKIRNREQREQDSVTRSYAQDREDKERKERLEQEREMKQNEEKER EQRRLEEERELERHKERERARQAVERATKEARERAAVEARAKAEREARQRSERAAVQRAQ QEARERAAVEAKERAERATAEAKERAAAEGKEKAASQARDRAAAERAAVERAQQEARKRA ERAAVERAAAEARERQAAAARDKTSKPDDLESFFGMGARANSAPKQRAPTVDSMFHSQTQ NRGSSTSTSMKKASSTTNIADDLSAIFGGAPTSEEFQEVDGESEERRRARMERHQRTRER AAKALAEKNERDMQQQREQAERHRLAETLDFEIKRWAAGKEGNLRALLSTLQYVLWPECG WQPVSLTDLITAAAVKKVYRKATLCIHPDKVQQKGANLQQKYIAEKVFDLLKEAWNKLNS EELF

Transcript Sequence

Transcript ID	Zm00001d041647_T009
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:131547321:131554249:1 gene:Zm00001d041647 gene_biotype:protein_coding transcript_biotype:protein_coding description:Auxilin-related protein 1
Sequence	GACTCGACCGCTCCTGTTCGCCGCTCCGCCATCGCCGGCGACCACTCCGGCGACGCTGCG TCTCCGGCGACCCCACCGACGCCTGTCCCAGCGACCCCATTCCTCCGATCCCCGCCTCAC GCCCTGCGTTCGATGACCTGCTCGGTGGATTTGGTAAGAGCTCACAGGTGAGGGAAGAGG TGGATGACAAGAGGAAACAAGAGGCAGCTATGGGGCCAGCGGCGGGTACTGGGTTTGATT ATTTGATCCCAGGCTTTGGCGGGAGGAGCTCCCCGCGGCAAAGGGATACTGTTGGTGCAA AACAACAGAAGATTTCCATGTCAACATCTAAGCAACCAGCTAGCTTAAGCGACCCCTTTG TTGTTCTCGAAACAACTTCATCCTCAGCCCATCCATTCGCAGATCCCTTGGATGAATTTG GTAAAGCTGCAAAATATCAAGGGAAAAGCCGTGAAAGTACTAACGTTGGGAGCAATCTGT TTGAGGATTCAAGCACTTCCATCCAGGCTCCAAAATCTGAACCTATTTTTACCTCAGAGG TGGACAATGGCTTGAAAGATAAGAATGAGTCTAGCAGAGCCCGAGACGCAAATCCTGTAC AGAGTTTTTCTAAAGGAAACTCCTCCCAACAACCTTCTGTAGAGGATTTTGAAAATATCT TTTCTAAGCCGCAGTCTGCCAGATATGCTGATGTCCATGTTGACATTGGCTCAGATAAAT ATAGTGGGAATGGTATAAACGACCAGTCACCTAGATCTGATGAATCCGAAGATGAGATAT GGCTTACAGCTTCTGAGATTCCCCTCTTCACACAGCCAACTAGTGCCCCACCACCTTCAA GGCCACCACCACCTCTTGCAGCTAAGCAAAAAAAACATGGATCAAAATCAAAAAGAAAAG ATGATGAACATCTAAAGCAGTCTAGGAAAAACAATGATCATCAAAGAAGTTCGTCAAATC ATGCTGGTGTTTCTACAGTAGATGAACTAGAAGATTTTGCCATGGGTAAGCCTCAGAGTG TGCATGCTTTAAATGCGGAAGAATTTGAGAGAAGTACAGCAGCAGCAGCATCTGCAGCTG CTATGAAAGAGGCCATGGATAAAGCAGAGGCAAAGTTCAAACATGCAAAGGAGGTACGAG AGAGAGAGCGTGATGCGAAGATTAGAAATAGAGAACAACGGGAACAAGATAGTGTAACAA GGTCGTATGCCCAGGATCGTGAGGACAAAGAGAGAAAGGAAAGACTAGAACAAGAAAGAG AGATGAAGCAAAATGAGGAAAAGGAAAGAGAGCAAAGAAGACTTGAAGAGGAAAGAGAAC TTGAGCGACATAAAGAAAGAGAAAGAGCTAGGCAAGCAGTGGAGAGGGCTACAAAGGAGG CACGGGAAAGAGCAGCTGTTGAAGCTCGTGCAAAAGCGGAGAGAGAGGCACGCCAACGTT CAGAACGTGCTGCTGTGCAAAGAGCCCAACAGGAAGCACGTGAGAGGGCAGCAGTGGAGG CTAAAGAGCGAGCAGAGAGGGCTACTGCAGAAGCAAAGGAAAGGGCTGCTGCTGAAGGTA AGGAAAAAGCTGCTAGTCAAGCCAGGGATAGGGCTGCAGCAGAAAGAGCTGCTGTGGAGA GAGCTCAGCAAGAAGCGAGGAAGAGAGCTGAACGAGCAGCAGTGGAAAGGGCTGCTGCTG AGGCTCGGGAAAGACAGGCTGCTGCTGCAAGAGATAAAACGAGCAAACCAGATGATCTAG AGTCCTTCTTTGGTATGGGTGCTCGAGCTAATAGTGCTCCGAAGCAAAGGGCTCCGACTG TGGACTCTATGTTTCATTCTCAAACGCAAAATAGAGGGAGTTCCACTTCGACATCAATGA AAAAGGCATCATCAACAACAAATATTGCTGATGACTTGTCTGCGATATTTGGAGGAGCTC CTACATCAGAAGAATTTCAAGAAGTAGATGGGGAGAGCGAAGAAAGAAGACGCGCTAGGA TGGAACGGCATCAAAGAACTCGTGAACGAGCGGCAAAGGCTTTGGCTGAGAAGAATGAAC GCGACATGCAGCAACAAAGAGAGCAGGCTGAAAGACATAGGCTTGCGGAAACACTGGACT TTGAGATTAAGCGCTGGGCTGCTGGAAAAGAAGGCAATTTGCGTGCATTGCTATCAACTT TACAATATGTTCTTTGGCCAGAATGTGGGTGGCAACCTGTATCCCTCACTGATTTGATCA CTGCTGCTGCTGTTAAAAAAGTGTACAGAAAAGCAACACTGTGTATCCATCCTGACAAGG TGCAGCAAAAGGGTGCAAATCTCCAACAGAAATATATCGCTGAGAAGGTTTTTGATCTCC TTAAGGAGGCGTGGAACAAACTCAACTCTGAAGAGCTCTTCTAAACAGCCTCACGACTGA ACATAGGGTCGCCCCTCAGGGTCTGCACAAGGTACTCTCGGAAGAAACTCACAAGCTGGA GTGGCTTGAGGTTGGTCGGGGGGAACCATGAAGCGACCAAGCGAAACCTGAGCTATGGTT GTTGTAATCACCGATGTTTGTTTCACTCCCCCAATTTTCTTTCCCAACTGTATGCTGATT CAATCACAACTCACAGAGACATGTGGCAGCTGCCCAAGCTGGACCTCATCCAGTAGGCCA GAAGGTGTAGTATTTATCCTGGGCTGTATGCACCGTCAGAGCGGGGGTTTTCTTAGGCCA GTGTTGTGGTTATAGATTAGGTACAGGTTTTTTTTAAGCATGGAGAGACGTTTTACTAGA TAATGATGAATGTTGCTTGTCTGATGCCATTGGCATCGTGGCAAGTTCGGTTGTCTTGTT TATAGTCAATTTCTGGAACATCACTTGACCTATACTCTGATTCCTGTTTT