Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d041626_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:3:129953081:129955906:-1 gene:Zm00001d041626 gene_biotype:protein_coding transcript_biotype:protein_coding description:AP-3 complex subunit delta
Sequence

ATGGCCTCCACCCCGCCGGCGCCCGCCGTGGCGCCGTCGCTGGTGGACACCCTCTTTCAG
CGCTCCCTAAATGACCTCGTCAAGTCCCTCCGAGCCGACCCGTCGGCCGCCGGCGAGGCC
CCCGCCGTTACCCGCGCGCTCTCCGAGATCCACCGCGAGATCCGCGCCCCCGACGCCGCC
ACCAAGTCCGTCGCGGTGCAGAAGCTCACGTACCTCTCCTCCCTCCACTTCGCCCCCGTC
TCCTCCCACCCGCTCGCCTTCCCCGCCATCGAGCTTCTGGCCTCGCCGCACCTCCCCCAC
AAGCGCCTGGCCTACCTCGCCGCATCTCTCTCGCTCCACCCGGCCTCGCTCTCCCTGCTC
CCGCTCGCCACGCACCAGCTCCACAAGGACCTCTCCCCCTCCGCTGGCGCCCACCAGCAC
GTCTCTGCGCTCGCGCTCCAGCTCCTCGGCTCACCCGCCGCGGCTGCCGCTCCCGACCTC
CCGGTTCACCTCGTGCACGACCTCGTGCCACACCTCACCCGCGGCAGCCCCCGCGCTATT
GCCGCCGCCGCGCGCGTCATAGCTGCCTCTCCGTCCGCGGCCGTGCCGGTCCTCTTCAAG
CCGCTCGCAGCCTGTCTCGCCTCTCCCGATCCTCGGGCGTCCACGGCTGCTGTGGCAGCC
TTCTGTGACCTATCGGCGCCGCCTGCTGACGCGACTCCTTTTCTGCCGCTTGCGCCCGAC
CTCTACAGCCTGCTCACCACCTCCCGATCCAACTGGGCGCTCATCAAGGTGCTCAAGGTG
TTTGCGCGACTGGCTCCTCTCGAGTCCCGCCTGGCAGCTAAAATTGTCGACCCGGTCTGC
CAGCTCCTCACTCGATCTGCGGCCATGTCACTGACCTTTGAGTGCATCCGTACGGTACTC
ACTGCACTGCCAGCACATGATGCCGCAGTCCGCCTTGCCATTGGGAAAACCAAGGAGTTC
ATTGCTGCTGCTGATGACCCCAACCTTCGGTACCTTGGGCTTCTGGCTCTTGGTATGATT
GGCCCAGCATATGCATCCACAGTGAATGATTGTTGGGATGCTATTGTGAAGTCACTGGGT
GATGCTGACGCGAACATTCGCCAGGAGGCATTGCATCTTATTATGGGGATGGTTAATGAA
AACAACATCATGGACATTGCTGGTATCCTGATCAGTCATGTTCCAAAGTCAGACCCAGAG
TTCGCAAGTGACATTCTTGGGGCTGTTCTAGCAGCATGTGGGCATAATGTGTATGAGATG
GTGGTGGATTTTGATTGGTATGTTTCACTCCTTGTGGATATGGCAAGAACTCTGCATTGT
GCCCAGGGGGATGAGATTGGTCGGCAGTTTGTTGATTTAGGACTGAGAGTGCAGGATGCG
CGGCCAGAGCTTGTCCGTTTAGCTCGAAGTCTTCTGATTGATCCTGCTTTGCTTGGAAAT
CACTTCCTCTTCCCTGTTCTTTCAGCGGCTGCATGGATTTCTGGTGAGTATGTGGACTTA
ACGAAGGATCCTGTTGAGCTTGTTGAAGCACTGTTGCAACCAAGGACCAGCCTCCTGCCA
ATTTCAGTGAGAGCTGTCTACATCCATGCAGTATTTAAATTGATTACGTGGTGTTTCAGT
GTGTATGTTGGGAGATTGGGTGATTCAGGCATGGCAATGGATGTCATGTTTGACAGGTTA
GCTGCTGATCAAACTGTTAGTGCGGAAAGCAATGCTGCACTTGGGTCTGGTGAAGAGCAA
GATATTGGGGCGAGCACAGTACTAAAGGACCCTTTTTTGCATGAATCAATACTTTACATG
ATTAACCTGATTCAAACAACAATTGGTCCACTCATTAACTGCAATGAAGTAGAACTCCAG
GAGAGAGCACACAACCTGATTGGTTTTATCCATTTAGTAAGAGAAATTCAAGAGTTGAAC
AAAAGGAAGGTTGCTGACGGTGACAAGTCAAGCAGGTTAAAAGAGCTTGTTGAGATTATG
CGGACAGTATTCTGTCAAGAACTAGGTCCTGTTTCTGTGAATGCACAGATGAAAGTGGCC
CCTCCAGATGGCCTTATCCTGAATGAAAATCTTGTTGAACTTGCTGGCATGGTGAGTGAA
GATGATACTACTCCCTCAGCTTCAATATTTTTCTATCCTTGCAGTCGTCATTCTTTAGAT
ACCAGAGACGAGCCTGCAGTGTCAATTGGTTCTTCATCTCTTTCTGAGCATCGCAAGAGG
CATGAACTCTTTTATCTCCAAACAAGGAAAACTGAGGATGAGCCAAATGATTACCCTCAA
GCTAACGATTCTCTACCATCTTCTAGCAATAATTCTGTTAATGACGACAAGTTGAAGGCT
GCTGACCTTGTATTTCCTGGGAAAAAGTTGACAGCCATGAAGTCCAGACCAAAAGTAGTT
AAGTTGGATGCTGAGGATTTCCTCAGTTCTATGATGCCTAGTGCAAATGTTCCGAAAGAA
GACCCCTTGTCTGGTGTTCTGCGTGATGTGCTCTTCGGTAGTGATGCTAAGGCATTGTCT
TCACAAAGGACTTCAGATATAAACTTGGAAGGAATGCTAAACAAAACAAGCAGTAATGAA
TCTAGCTCTCAGCAGATAGAGAATTTAGGAAGCCATCCCGCTTCATGTTCTAGAACAAGC
AAGGAACAAAACAATGATAAAGTGAAAGGTACAAATCCTCCTGAAAGTGATGGCAAAGAA
CCAAGAAAGCACAGAAGCTCTGGTAGAAGTGGACATCGTCAAGGAAAACATAAGCATAGA
GAAAAGTCTAGTACTCAGCCTGATGCTATACCTCAAGCTCCAGTCATTCAAGATTTCCTT
CTGTAG

Peptide Sequence

PEP ID

Zm00001d041626_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:3:129953081:129955906:-1 gene:Zm00001d041626 transcript:Zm00001d041626_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:AP-3 complex subunit delta
Sequence

MASTPPAPAVAPSLVDTLFQRSLNDLVKSLRADPSAAGEAPAVTRALSEIHREIRAPDAA
TKSVAVQKLTYLSSLHFAPVSSHPLAFPAIELLASPHLPHKRLAYLAASLSLHPASLSLL
PLATHQLHKDLSPSAGAHQHVSALALQLLGSPAAAAAPDLPVHLVHDLVPHLTRGSPRAI
AAAARVIAASPSAAVPVLFKPLAACLASPDPRASTAAVAAFCDLSAPPADATPFLPLAPD
LYSLLTTSRSNWALIKVLKVFARLAPLESRLAAKIVDPVCQLLTRSAAMSLTFECIRTVL
TALPAHDAAVRLAIGKTKEFIAAADDPNLRYLGLLALGMIGPAYASTVNDCWDAIVKSLG
DADANIRQEALHLIMGMVNENNIMDIAGILISHVPKSDPEFASDILGAVLAACGHNVYEM
VVDFDWYVSLLVDMARTLHCAQGDEIGRQFVDLGLRVQDARPELVRLARSLLIDPALLGN
HFLFPVLSAAAWISGEYVDLTKDPVELVEALLQPRTSLLPISVRAVYIHAVFKLITWCFS
VYVGRLGDSGMAMDVMFDRLAADQTVSAESNAALGSGEEQDIGASTVLKDPFLHESILYM
INLIQTTIGPLINCNEVELQERAHNLIGFIHLVREIQELNKRKVADGDKSSRLKELVEIM
RTVFCQELGPVSVNAQMKVAPPDGLILNENLVELAGMVSEDDTTPSASIFFYPCSRHSLD
TRDEPAVSIGSSSLSEHRKRHELFYLQTRKTEDEPNDYPQANDSLPSSSNNSVNDDKLKA
ADLVFPGKKLTAMKSRPKVVKLDAEDFLSSMMPSANVPKEDPLSGVLRDVLFGSDAKALS
SQRTSDINLEGMLNKTSSNESSSQQIENLGSHPASCSRTSKEQNNDKVKGTNPPESDGKE
PRKHRSSGRSGHRQGKHKHREKSSTQPDAIPQAPVIQDFLL

Transcript Sequence

Transcript ID

Zm00001d041626_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:129953081:129955906:-1 gene:Zm00001d041626 gene_biotype:protein_coding transcript_biotype:protein_coding description:AP-3 complex subunit delta
Sequence

ATGGCCTCCACCCCGCCGGCGCCCGCCGTGGCGCCGTCGCTGGTGGACACCCTCTTTCAG
CGCTCCCTAAATGACCTCGTCAAGTCCCTCCGAGCCGACCCGTCGGCCGCCGGCGAGGCC
CCCGCCGTTACCCGCGCGCTCTCCGAGATCCACCGCGAGATCCGCGCCCCCGACGCCGCC
ACCAAGTCCGTCGCGGTGCAGAAGCTCACGTACCTCTCCTCCCTCCACTTCGCCCCCGTC
TCCTCCCACCCGCTCGCCTTCCCCGCCATCGAGCTTCTGGCCTCGCCGCACCTCCCCCAC
AAGCGCCTGGCCTACCTCGCCGCATCTCTCTCGCTCCACCCGGCCTCGCTCTCCCTGCTC
CCGCTCGCCACGCACCAGCTCCACAAGGACCTCTCCCCCTCCGCTGGCGCCCACCAGCAC
GTCTCTGCGCTCGCGCTCCAGCTCCTCGGCTCACCCGCCGCGGCTGCCGCTCCCGACCTC
CCGGTTCACCTCGTGCACGACCTCGTGCCACACCTCACCCGCGGCAGCCCCCGCGCTATT
GCCGCCGCCGCGCGCGTCATAGCTGCCTCTCCGTCCGCGGCCGTGCCGGTCCTCTTCAAG
CCGCTCGCAGCCTGTCTCGCCTCTCCCGATCCTCGGGCGTCCACGGCTGCTGTGGCAGCC
TTCTGTGACCTATCGGCGCCGCCTGCTGACGCGACTCCTTTTCTGCCGCTTGCGCCCGAC
CTCTACAGCCTGCTCACCACCTCCCGATCCAACTGGGCGCTCATCAAGGTGCTCAAGGTG
TTTGCGCGACTGGCTCCTCTCGAGTCCCGCCTGGCAGCTAAAATTGTCGACCCGGTCTGC
CAGCTCCTCACTCGATCTGCGGCCATGTCACTGACCTTTGAGTGCATCCGTACGGTACTC
ACTGCACTGCCAGCACATGATGCCGCAGTCCGCCTTGCCATTGGGAAAACCAAGGAGTTC
ATTGCTGCTGCTGATGACCCCAACCTTCGGTACCTTGGGCTTCTGGCTCTTGGTATGATT
GGCCCAGCATATGCATCCACAGTGAATGATTGTTGGGATGCTATTGTGAAGTCACTGGGT
GATGCTGACGCGAACATTCGCCAGGAGGCATTGCATCTTATTATGGGGATGGTTAATGAA
AACAACATCATGGACATTGCTGGTATCCTGATCAGTCATGTTCCAAAGTCAGACCCAGAG
TTCGCAAGTGACATTCTTGGGGCTGTTCTAGCAGCATGTGGGCATAATGTGTATGAGATG
GTGGTGGATTTTGATTGGTATGTTTCACTCCTTGTGGATATGGCAAGAACTCTGCATTGT
GCCCAGGGGGATGAGATTGGTCGGCAGTTTGTTGATTTAGGACTGAGAGTGCAGGATGCG
CGGCCAGAGCTTGTCCGTTTAGCTCGAAGTCTTCTGATTGATCCTGCTTTGCTTGGAAAT
CACTTCCTCTTCCCTGTTCTTTCAGCGGCTGCATGGATTTCTGGTGAGTATGTGGACTTA
ACGAAGGATCCTGTTGAGCTTGTTGAAGCACTGTTGCAACCAAGGACCAGCCTCCTGCCA
ATTTCAGTGAGAGCTGTCTACATCCATGCAGTATTTAAATTGATTACGTGGTGTTTCAGT
GTGTATGTTGGGAGATTGGGTGATTCAGGCATGGCAATGGATGTCATGTTTGACAGGTTA
GCTGCTGATCAAACTGTTAGTGCGGAAAGCAATGCTGCACTTGGGTCTGGTGAAGAGCAA
GATATTGGGGCGAGCACAGTACTAAAGGACCCTTTTTTGCATGAATCAATACTTTACATG
ATTAACCTGATTCAAACAACAATTGGTCCACTCATTAACTGCAATGAAGTAGAACTCCAG
GAGAGAGCACACAACCTGATTGGTTTTATCCATTTAGTAAGAGAAATTCAAGAGTTGAAC
AAAAGGAAGGTTGCTGACGGTGACAAGTCAAGCAGGTTAAAAGAGCTTGTTGAGATTATG
CGGACAGTATTCTGTCAAGAACTAGGTCCTGTTTCTGTGAATGCACAGATGAAAGTGGCC
CCTCCAGATGGCCTTATCCTGAATGAAAATCTTGTTGAACTTGCTGGCATGGTGAGTGAA
GATGATACTACTCCCTCAGCTTCAATATTTTTCTATCCTTGCAGTCGTCATTCTTTAGAT
ACCAGAGACGAGCCTGCAGTGTCAATTGGTTCTTCATCTCTTTCTGAGCATCGCAAGAGG
CATGAACTCTTTTATCTCCAAACAAGGAAAACTGAGGATGAGCCAAATGATTACCCTCAA
GCTAACGATTCTCTACCATCTTCTAGCAATAATTCTGTTAATGACGACAAGTTGAAGGCT
GCTGACCTTGTATTTCCTGGGAAAAAGTTGACAGCCATGAAGTCCAGACCAAAAGTAGTT
AAGTTGGATGCTGAGGATTTCCTCAGTTCTATGATGCCTAGTGCAAATGTTCCGAAAGAA
GACCCCTTGTCTGGTGTTCTGCGTGATGTGCTCTTCGGTAGTGATGCTAAGGCATTGTCT
TCACAAAGGACTTCAGATATAAACTTGGAAGGAATGCTAAACAAAACAAGCAGTAATGAA
TCTAGCTCTCAGCAGATAGAGAATTTAGGAAGCCATCCCGCTTCATGTTCTAGAACAAGC
AAGGAACAAAACAATGATAAAGTGAAAGGTACAAATCCTCCTGAAAGTGATGGCAAAGAA
CCAAGAAAGCACAGAAGCTCTGGTAGAAGTGGACATCGTCAAGGAAAACATAAGCATAGA
GAAAAGTCTAGTACTCAGCCTGATGCTATACCTCAAGCTCCAGTCATTCAAGATTTCCTT
CTGTAG