Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d041620_T011
CDS Infomation

cds chromosome:B73_RefGen_v4:3:129743481:129749028:1 gene:Zm00001d041620 gene_biotype:protein_coding transcript_biotype:protein_coding description:CTP synthase family protein
Sequence

ATGTCCCCCTTTGAGCATGGCGAGGTGTTTGTTCTTGATGATGGTGGAGAGGTTGACTTG
GATTTGGGGAATTATGAGCGTTTCATAGATGTTACTCTGACAAGGGATAACAACATTACC
ACTGGAAAGATATACCAGTCTGTCATTGAGAAGGAGAGAAGGGGTGATTATCTTGGAAAG
ACTGTACAGGTTATTCCTCATGTCACTGATGAAATAAAACAGTGGATACAGTCAGTGTCT
TCGGTTCCTGTGGATGGGCAGACTCGTCCAGCTGATGTTTGTGTTATTGAATTGGGAGGC
ACTGTAGGTGATATTGAGTCGATGCCATTCATTGAAGCTTTGCGCCAATTATCCTTTTCT
CTTGGCAAGGAAAATTTCTGCCTCATACACGTTAGCCTTGTTCCAGTATTGGGTGTAGTT
GGTGAGCAGAAAACTAAACCAACACAACATAGTGTACGAGAACTGAGAGCCTTGGGTCTG
ACTCCTGATCTTCTAGCATGCCGGTCAGCACAGCCACTAATAGGATCTGTTAAAGAGAAG
CTTTCACAATTTTGCCATGTCCCGGTCGAGAACATACTTAACATCCATGATGTTCCAAAT
TTATGGCATGTCCCACTTATTCTTAGAAACCAAAAGGCTCATGAAGCTATAATCAAACAA
CTAAACCTTGCTAGATCTGCTGGACCACCTGAATTACGAGATTGGACAGATATGGCTGAG
TCGTATGACAACCTCAATAACTCTGTTAAAGTTGCTTTGGTTGGGAAGTATACTAATCTG
ACAGATTCTTACCTATCAGTGGTGAAGGCTCTCCTACATGCCAGTGTTGCCTGTTCGTTA
AAGCCATCTATCCAGTGGATTGCAGCTTCGGATCTTGAAGATGCAACTGCAATATCTGCA
CCAGATGCCCATGCTGAAGCCTGGGAAACTCTTAAAGGTTCATCATGCATTTTGATACCT
GGAGGATTTGGGGATCGTGGAATTTCAGGGATGATATTGGCTGCAAAATATGCTCGTGAG
AATAGAGTTCCATATCTTGGTATTTGCTTGGGCATGCAGATATCAGTGATTGAGATTTCC
AGACATGTCCTGGGCCTGGAAGATGCAGACAGTGAGGAGTTTAACAAGGATACACCGAAT
CATGTTGTTATGTACATGCCTGAGGTTTCAAAAACACATATGGGAAACACGATGAGGTTG
GGCTGCAGGAGAACATTCTTCAGCAAACCTGATTGTCTTACATCAAAATTGTACGGAAGT
CCTCCACATGTAGATGAGCGTCATCGTCATAGATACGAGGTCAATCCCTCTTTTGTTCCC
ATGCTTGAAAGTGCTGGTCTTCATTTTGTTGGTTGTGACGAAAGTCGAAACCGGATGGAG
ATTGTGGAGCTACAAGATCATCCCTTCTATGTAGGTGTTCAGTTCCACCCGGAGTTCAAA
TCAAGGCCTCGAAGACCTTCACCTCCTTTTACAGGTCTAATAATGGCGGCCACTAAACAA
CTGGGAGCAAATTCGAATAGCTCGAATGGCTTCGTTGGAGCTTCTGACTAA

Peptide Sequence

PEP ID

Zm00001d041620_P011
PEP Infomation

pep chromosome:B73_RefGen_v4:3:129743481:129749028:1 gene:Zm00001d041620 transcript:Zm00001d041620_T011 gene_biotype:protein_coding transcript_biotype:protein_coding description:CTP synthase family protein
Sequence

MSPFEHGEVFVLDDGGEVDLDLGNYERFIDVTLTRDNNITTGKIYQSVIEKERRGDYLGK
TVQVIPHVTDEIKQWIQSVSSVPVDGQTRPADVCVIELGGTVGDIESMPFIEALRQLSFS
LGKENFCLIHVSLVPVLGVVGEQKTKPTQHSVRELRALGLTPDLLACRSAQPLIGSVKEK
LSQFCHVPVENILNIHDVPNLWHVPLILRNQKAHEAIIKQLNLARSAGPPELRDWTDMAE
SYDNLNNSVKVALVGKYTNLTDSYLSVVKALLHASVACSLKPSIQWIAASDLEDATAISA
PDAHAEAWETLKGSSCILIPGGFGDRGISGMILAAKYARENRVPYLGICLGMQISVIEIS
RHVLGLEDADSEEFNKDTPNHVVMYMPEVSKTHMGNTMRLGCRRTFFSKPDCLTSKLYGS
PPHVDERHRHRYEVNPSFVPMLESAGLHFVGCDESRNRMEIVELQDHPFYVGVQFHPEFK
SRPRRPSPPFTGLIMAATKQLGANSNSSNGFVGASD

Transcript Sequence

Transcript ID

Zm00001d041620_T011
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:129743481:129749028:1 gene:Zm00001d041620 gene_biotype:protein_coding transcript_biotype:protein_coding description:CTP synthase family protein
Sequence

TGAACACAGATGCTGGTACAATGTCCCCCTTTGAGCATGGCGAGGTGTTTGTTCTTGATG
ATGGTGGAGAGGTTGACTTGGATTTGGGGAATTATGAGCGTTTCATAGATGTTACTCTGA
CAAGGGATAACAACATTACCACTGGAAAGATATACCAGTCTGTCATTGAGAAGGAGAGAA
GGGGTGATTATCTTGGAAAGACTGTACAGGTTATTCCTCATGTCACTGATGAAATAAAAC
AGTGGATACAGTCAGTGTCTTCGGTTCCTGTGGATGGGCAGACTCGTCCAGCTGATGTTT
GTGTTATTGAATTGGGAGGCACTGTAGGTGATATTGAGTCGATGCCATTCATTGAAGCTT
TGCGCCAATTATCCTTTTCTCTTGGCAAGGAAAATTTCTGCCTCATACACGTTAGCCTTG
TTCCAGTATTGGGTGTAGTTGGTGAGCAGAAAACTAAACCAACACAACATAGTGTACGAG
AACTGAGAGCCTTGGGTCTGACTCCTGATCTTCTAGCATGCCGGTCAGCACAGCCACTAA
TAGGATCTGTTAAAGAGAAGCTTTCACAATTTTGCCATGTCCCGGTCGAGAACATACTTA
ACATCCATGATGTTCCAAATTTATGGCATGTCCCACTTATTCTTAGAAACCAAAAGGCTC
ATGAAGCTATAATCAAACAACTAAACCTTGCTAGATCTGCTGGACCACCTGAATTACGAG
ATTGGACAGATATGGCTGAGTCGTATGACAACCTCAATAACTCTGTTAAAGTTGCTTTGG
TTGGGAAGTATACTAATCTGACAGATTCTTACCTATCAGTGGTGAAGGCTCTCCTACATG
CCAGTGTTGCCTGTTCGTTAAAGCCATCTATCCAGTGGATTGCAGCTTCGGATCTTGAAG
ATGCAACTGCAATATCTGCACCAGATGCCCATGCTGAAGCCTGGGAAACTCTTAAAGGTT
CATCATGCATTTTGATACCTGGAGGATTTGGGGATCGTGGAATTTCAGGGATGATATTGG
CTGCAAAATATGCTCGTGAGAATAGAGTTCCATATCTTGGTATTTGCTTGGGCATGCAGA
TATCAGTGATTGAGATTTCCAGACATGTCCTGGGCCTGGAAGATGCAGACAGTGAGGAGT
TTAACAAGGATACACCGAATCATGTTGTTATGTACATGCCTGAGGTTTCAAAAACACATA
TGGGAAACACGATGAGGTTGGGCTGCAGGAGAACATTCTTCAGCAAACCTGATTGTCTTA
CATCAAAATTGTACGGAAGTCCTCCACATGTAGATGAGCGTCATCGTCATAGATACGAGG
TCAATCCCTCTTTTGTTCCCATGCTTGAAAGTGCTGGTCTTCATTTTGTTGGTTGTGACG
AAAGTCGAAACCGGATGGAGATTGTGGAGCTACAAGATCATCCCTTCTATGTAGGTGTTC
AGTTCCACCCGGAGTTCAAATCAAGGCCTCGAAGACCTTCACCTCCTTTTACAGGTCTAA
TAATGGCGGCCACTAAACAACTGGGAGCAAATTCGAATAGCTCGAATGGCTTCGTTGGAG
CTTCTGACTAATGTAAGATGGGGATCTCCCGTTGCTGCAGACACCCAAGTTATTTCTTGT
GCACATTAGATGTACAGGAAAACAATCTAAGCCTGAAGCAGAGTGTTTCTCTCTCTCGAC
CACCTGAGTGGCGTAAGCTAACGGTCTTACAGTGTATTGGGGCCGAACCGTCATGGTTTT
GTTGACTGTCATTTCAATTGAGCTTAACAGCAGTCAGTGCTCCCATCCTTGTGATTCCAA
TTGAGATTAACAGTAGTAAGTG