Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d041610_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:3:129609526:129612757:-1 gene:Zm00001d041610 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA pseudouridine synthase 1
Sequence	ATGACGAAACTACCCCTGCCTCTTCTCCTTCTTCAGCCTCCAGCCGGCGCCGCCTCCCCG CTCCGCTCCCTCCTGCCACCTGCGCGCAGCCTCACGGCGATGTCAGCGGCCACGTCGACG GCGCCGTCGATCGGAGAGTATCCTTCCCCGGTGTCCCCTCCCTACCCGGCCACCTCCAAG GACCTGGAGCTCCGGCGCGCCATGACCGCCTCCGCGCGCTCCGCGGCCTTCGCGTCTGCG GACGTCGTGTTCGAGGACGAGTGGCTCGCCGTCGTCGACAAACCCGCCGGCGTCTACTGC GACGCCCTCCTCACCTCCTTCCCTTGCTCTGCCGTCTCAGGCAAACATTTCTTGCGACTT GCAGAGAATCCAGCAACTAAACCTAACCTTCACCTTGCAAACAGGCTGGACCGTGATACT AGTGGGCTCATGGTTATCACCAAATGCAACAAAGTTGCTGGGAAGCTAGTGAAGGCATTC ACTGACCATAAAGTCAAGAAAACATATCTAGCTCTCTGCATAGGTTTCCCACCGGCATGG GAAAAGATCAAGATATGTTCTGGCCATGGGCGATCGAAACACGGCGCTTGGCGTGTATAT GCTATGTCTGATGTTGGCCGTTCACTCCCAGGCGGCTCTGTCGTACGGGACATGAGCACG CGGTTTGAAGTTCTAGGCGTCAACGGTAAAGGGCAGTTCAGAGAACCCTACAGCTTGGAC ACCGACGATATCGAGCCAATTACTGTGCAAGAAAAGGCGACTGACCAGACTTGTGGCGGT GATGCGAACAGCAGTGTCATCTTGGTTAGAGCCTATCCCCAGAGCGGACGGACACACCAG ATTCGTCTACACTGCCAGTATCTTGGTCTCCCTATCAGAGGTGATGTGAAGTACGGCGGG GTGATCGAGTGGGACGGCGTAGAGTGTGAGGGCCATGCACTGCATGCGGAGAGCTTGTCA TTTGTACACCCCATCACTGGATTGCCCATCACTCTCCGGTCACCTCTCCCTCCATGGGCA AAAGATTGCATATCAGCAATGGAATAA

Peptide Sequence

PEP ID	Zm00001d041610_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:3:129609526:129612757:-1 gene:Zm00001d041610 transcript:Zm00001d041610_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA pseudouridine synthase 1
Sequence	MTKLPLPLLLLQPPAGAASPLRSLLPPARSLTAMSAATSTAPSIGEYPSPVSPPYPATSK DLELRRAMTASARSAAFASADVVFEDEWLAVVDKPAGVYCDALLTSFPCSAVSGKHFLRL AENPATKPNLHLANRLDRDTSGLMVITKCNKVAGKLVKAFTDHKVKKTYLALCIGFPPAW EKIKICSGHGRSKHGAWRVYAMSDVGRSLPGGSVVRDMSTRFEVLGVNGKGQFREPYSLD TDDIEPITVQEKATDQTCGGDANSSVILVRAYPQSGRTHQIRLHCQYLGLPIRGDVKYGG VIEWDGVECEGHALHAESLSFVHPITGLPITLRSPLPPWAKDCISAME

Transcript Sequence

Transcript ID	Zm00001d041610_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:129609526:129612757:-1 gene:Zm00001d041610 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA pseudouridine synthase 1
Sequence	CAAATAGACGTGCTACCTTATTTTACCTCAATGACGAAACTACCCCTGCCTCTTCTCCTT CTTCAGCCTCCAGCCGGCGCCGCCTCCCCGCTCCGCTCCCTCCTGCCACCTGCGCGCAGC CTCACGGCGATGTCAGCGGCCACGTCGACGGCGCCGTCGATCGGAGAGTATCCTTCCCCG GTGTCCCCTCCCTACCCGGCCACCTCCAAGGACCTGGAGCTCCGGCGCGCCATGACCGCC TCCGCGCGCTCCGCGGCCTTCGCGTCTGCGGACGTCGTGTTCGAGGACGAGTGGCTCGCC GTCGTCGACAAACCCGCCGGCGTCTACTGCGACGCCCTCCTCACCTCCTTCCCTTGCTCT GCCGTCTCAGGCAAACATTTCTTGCGACTTGCAGAGAATCCAGCAACTAAACCTAACCTT CACCTTGCAAACAGGCTGGACCGTGATACTAGTGGGCTCATGGTTATCACCAAATGCAAC AAAGTTGCTGGGAAGCTAGTGAAGGCATTCACTGACCATAAAGTCAAGAAAACATATCTA GCTCTCTGCATAGGTTTCCCACCGGCATGGGAAAAGATCAAGATATGTTCTGGCCATGGG CGATCGAAACACGGCGCTTGGCGTGTATATGCTATGTCTGATGTTGGCCGTTCACTCCCA GGCGGCTCTGTCGTACGGGACATGAGCACGCGGTTTGAAGTTCTAGGCGTCAACGGTAAA GGGCAGTTCAGAGAACCCTACAGCTTGGACACCGACGATATCGAGCCAATTACTGTGCAA GAAAAGGCGACTGACCAGACTTGTGGCGGTGATGCGAACAGCAGTGTCATCTTGGTTAGA GCCTATCCCCAGAGCGGACGGACACACCAGATTCGTCTACACTGCCAGTATCTTGGTCTC CCTATCAGAGGTGATGTGAAGTACGGCGGGGTGATCGAGTGGGACGGCGTAGAGTGTGAG GGCCATGCACTGCATGCGGAGAGCTTGTCATTTGTACACCCCATCACTGGATTGCCCATC ACTCTCCGGTCACCTCTCCCTCCATGGGCAAAAGATTGCATATCAGCAATGGAATAAAGT TCCCTTGGCCTCAATGTGATGCACGATGCTCCATTTGGCACTGAAATGTCCACCAAGGAT GTAACTCTGAGATCTCAAAAGGCATCATCTCTTGAAGACCTTTTCTGGGAGTAGCGTTGG GAAATAGCACTATCAAATATACTGAGTCCACTGTTACAGGCAGTTCTACTTGAGACTGTA ATTTTAGCACGTGTACCGTAGAGATATTGAGTTGTTTGTTGTAGTTTTGTTTCAAATTGT GAGTACCCAAACGCAGGCACACACAACACATGTTGAACCATGGATATTTATTTATTTATT TATTTGGTCGTTCAACAAGGC