Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d041495_T005
CDS Infomation	cds chromosome:B73_RefGen_v4:3:124129914:124133015:1 gene:Zm00001d041495 gene_biotype:protein_coding transcript_biotype:protein_coding description:SRP40 carboxy-terminal domain protein
Sequence	ATGCTCTTCGTCCCGCGCCAAGTCGTACTCGCCGCCTCATCACAGCCCCGCGCCGCCGCC TCTTCCGCCATGGCCAAGGAGGAATCCAAGAAGGAGAAGAAGAAGGCCAAGGCCAAGGTG GCCAATGGAGCCGCCGCCGCCGCCGCCGCCCCGGTCCCTGGCGCGAGGGCCGCGGTGGTC GCCTCCGTCGCCGCCTTCCTCGAGTCCGCTGGGCTCTCGCGCACGCTCGTCGCCCTCCAA TCCGAGGCCGGCCTCGAGGCCGGTGCGTGGGGGTCGTCACAGGTGAACTTGGAGGAGCTG GTTGCCAGATTCTTAGAGTCGAGCAATTCAACTCGGGCGGCTGCCATTCTGGGAAGCGAT GAGCAAGACAAGGAAAATGATGATATAGCAGGAGAAGTTGGCAAGGAAAAAAAGAGGAGC GGCACAGAAGCCGGTGAGCCTGAGAGCAAGGCGATCGAGCCTTTAGCTGAGGAAAAGCCG ACTGAAAATATGGACGGTGAGGCTAAAGAGAAGAAACAAAAGAAGAAGAAAGACAAGGGT GACCCTTCAGCTGCGAATGCTGCTAGCGAGGGAACAACTGAAATTGTGAAGAACGCCGAC CAGAAGGACGATGAGGCCAAGGAGAAGAAACAGAAGAAGAAGAAGGACAAGGGTGACCCC TCAGCTGCGGGCGCTGGCAGCGGCGAAACAACTGAAACAGTGAAGGAGGATGATCATAAG CTTGATGGCAAGAAGAAGAAGAAAAACAAGAAGCAGGGAAAGGATGATGATGTCGAAGCT AGGCTGGAAAAGGCAGAATTAGCAATACTTAACAAGTTTGAGGCAGCAGAAAAGCTCAAT GGAAGAGAGGTAGAACCAAAAGGTCAGAATGACAGTGCTGATGACTGCAGTGGTGCTGTG GAAAGGAAAAAGAAGAAGAAAGAGAAATCATCTGCCGGGACTTCAGAGAAGACTGATGCA GGAAGTGCACCTGCTGAGGCTGATGGTGCCAAGGGAAAGAATGGTGCTGTAGAAACAGTC AAGGATGATAATGAGAAAAAGGCCAAAAAAAAGCGGAAGAAGTCTAACCCTGAAGAAACT GTTCAGGTGGAAGGTAAAGAGGCTGCAGGGAAAGATTCAGTCCCAAAACAAGATGATGCG AACAAGAGTGTAATGGAGATTGAAGAAGGTAACCAAGGGAAGTCGTCAAATGAAAATGCA GTTGCTGGCAAAAAACGGAAGCTAGAAGAAGTTGAAGGAAGCATTCCCCCTGTGACTGGG AAAGAAGATTGCACAGCCAACGAAAGTCTAAGCAATGGTTTTGCAGAGGATAAAAAAGAA GAAAGCAACACAAAACCAAGCAAAAGGCAGAAACATTCATCTGAGCCCAAGACTGTGACC CCATTTCAACGTATTAAGGTGGACGACGTCAGATTTGCAGATGACAGGCTTCAGGATAAC TCGTATTGGGCTAAGGGTGGCGCAGACACCGGTTACGGCGCAAAGGCACAGGAGATCCTT GGCCAAGTCAAGGGAAGGCCTGGTGCTGGTGGGAAGAAGCGATGCGATGGATGGTGCATG CAATACAACACGGTACCAGCTGGATTAAATCAGTTGCGCTTATGCGACGTTAACGTTGCT ACTCTGCGTGTTATGAGTTTGCCCGTGCTCTTGATTCCTTTCGAAATGACTACCTTGGAG CCGCTGATGGAAGTGCAGTGA

Peptide Sequence

PEP ID	Zm00001d041495_P005
PEP Infomation	pep chromosome:B73_RefGen_v4:3:124129914:124133015:1 gene:Zm00001d041495 transcript:Zm00001d041495_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:SRP40 carboxy-terminal domain protein
Sequence	MLFVPRQVVLAASSQPRAAASSAMAKEESKKEKKKAKAKVANGAAAAAAAPVPGARAAVV ASVAAFLESAGLSRTLVALQSEAGLEAGAWGSSQVNLEELVARFLESSNSTRAAAILGSD EQDKENDDIAGEVGKEKKRSGTEAGEPESKAIEPLAEEKPTENMDGEAKEKKQKKKKDKG DPSAANAASEGTTEIVKNADQKDDEAKEKKQKKKKDKGDPSAAGAGSGETTETVKEDDHK LDGKKKKKNKKQGKDDDVEARLEKAELAILNKFEAAEKLNGREVEPKGQNDSADDCSGAV ERKKKKKEKSSAGTSEKTDAGSAPAEADGAKGKNGAVETVKDDNEKKAKKKRKKSNPEET VQVEGKEAAGKDSVPKQDDANKSVMEIEEGNQGKSSNENAVAGKKRKLEEVEGSIPPVTG KEDCTANESLSNGFAEDKKEESNTKPSKRQKHSSEPKTVTPFQRIKVDDVRFADDRLQDN SYWAKGGADTGYGAKAQEILGQVKGRPGAGGKKRCDGWCMQYNTVPAGLNQLRLCDVNVA TLRVMSLPVLLIPFEMTTLEPLMEVQ

Transcript Sequence

Transcript ID	Zm00001d041495_T005
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:124129914:124133015:1 gene:Zm00001d041495 gene_biotype:protein_coding transcript_biotype:protein_coding description:SRP40 carboxy-terminal domain protein
Sequence	GATGCTCTTCGTCCCGCGCCAAGTCGTACTCGCCGCCTCATCACAGCCCCGCGCCGCCGC CTCTTCCGCCATGGCCAAGGAGGAATCCAAGAAGGAGAAGAAGAAGGCCAAGGCCAAGGT GGCCAATGGAGCCGCCGCCGCCGCCGCCGCCCCGGTCCCTGGCGCGAGGGCCGCGGTGGT CGCCTCCGTCGCCGCCTTCCTCGAGTCCGCTGGGCTCTCGCGCACGCTCGTCGCCCTCCA ATCCGAGGCCGGCCTCGAGGCCGGTGCGTGGGGGTCGTCACAGGTGAACTTGGAGGAGCT GGTTGCCAGATTCTTAGAGTCGAGCAATTCAACTCGGGCGGCTGCCATTCTGGGAAGCGA TGAGCAAGACAAGGAAAATGATGATATAGCAGGAGAAGTTGGCAAGGAAAAAAAGAGGAG CGGCACAGAAGCCGGTGAGCCTGAGAGCAAGGCGATCGAGCCTTTAGCTGAGGAAAAGCC GACTGAAAATATGGACGGTGAGGCTAAAGAGAAGAAACAAAAGAAGAAGAAAGACAAGGG TGACCCTTCAGCTGCGAATGCTGCTAGCGAGGGAACAACTGAAATTGTGAAGAACGCCGA CCAGAAGGACGATGAGGCCAAGGAGAAGAAACAGAAGAAGAAGAAGGACAAGGGTGACCC CTCAGCTGCGGGCGCTGGCAGCGGCGAAACAACTGAAACAGTGAAGGAGGATGATCATAA GCTTGATGGCAAGAAGAAGAAGAAAAACAAGAAGCAGGGAAAGGATGATGATGTCGAAGC TAGGCTGGAAAAGGCAGAATTAGCAATACTTAACAAGTTTGAGGCAGCAGAAAAGCTCAA TGGAAGAGAGGTAGAACCAAAAGGTCAGAATGACAGTGCTGATGACTGCAGTGGTGCTGT GGAAAGGAAAAAGAAGAAGAAAGAGAAATCATCTGCCGGGACTTCAGAGAAGACTGATGC AGGAAGTGCACCTGCTGAGGCTGATGGTGCCAAGGGAAAGAATGGTGCTGTAGAAACAGT CAAGGATGATAATGAGAAAAAGGCCAAAAAAAAGCGGAAGAAGTCTAACCCTGAAGAAAC TGTTCAGGTGGAAGGTAAAGAGGCTGCAGGGAAAGATTCAGTCCCAAAACAAGATGATGC GAACAAGAGTGTAATGGAGATTGAAGAAGGTAACCAAGGGAAGTCGTCAAATGAAAATGC AGTTGCTGGCAAAAAACGGAAGCTAGAAGAAGTTGAAGGAAGCATTCCCCCTGTGACTGG GAAAGAAGATTGCACAGCCAACGAAAGTCTAAGCAATGGTTTTGCAGAGGATAAAAAAGA AGAAAGCAACACAAAACCAAGCAAAAGGCAGAAACATTCATCTGAGCCCAAGACTGTGAC CCCATTTCAACGTATTAAGGTGGACGACGTCAGATTTGCAGATGACAGGCTTCAGGATAA CTCGTATTGGGCTAAGGGTGGCGCAGACACCGGTTACGGCGCAAAGGCACAGGAGATCCT TGGCCAAGTCAAGGGAAGGCCTGGTGCTGGTGGGAAGAAGCGATGCGATGGATGGTGCAT GCAATACAACACGGTACCAGCTGGATTAAATCAGTTGCGCTTATGCGACGTTAACGTTGC TACTCTGCGTGTTATGAGTTTGCCCGTGCTCTTGATTCCTTTCGAAATGACTACCTTGGA GCCGCTGATGGAAGTGCAGTGAGCTAGGCCCAGCGTAGAACTGGGCTCTTTCTATCGACC CACTGATCTCGGGACAATTGATCTGTATCATCAATTTCCATCGCTAGACCCAGCGTAGAA CTGGGCTCTTTCTACTCGAGGACACTACAGGAACTAAAAT