Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d041480_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:3:122677055:122681572:-1 gene:Zm00001d041480 gene_biotype:protein_coding transcript_biotype:protein_coding description:DEAD-box ATP-dependent RNA helicase 53
Sequence	ATGTACGCCGTCCTCCGCCGCGCGGCGCCCCTCAGGCGGCGTGCCGTGTCCGCGCTCGCC GCCGCGCTGCTCCAGCAGCAGCCGGCGGCGCTGGGAGCTGTAGCCCCGCGGGCGCCGACG CCGCTCCCGGCGGCCGCGTGGTTCCACTCCTCGCCGGCGTGGCTTGGTTTCCGGGATACC ACAGAGTTGGCGGCGCGCGCGGAGTTCGCTGCGGAGGAAGGTTTGTTCTATGAGGACGAC AGTAGGGCGCCGGCCGGCGGCCCGGCGGCTGAGGGGCTCGAGATTGCCAAGCTCGGGATC TCGTCCAAGATCGTCGAAAGGCTCGCCAGCAAGGGCATCACCAAGCTGTTCCCTATCCAG AGGGCTGTCCTTGAGCCAGTAATGCAAGGAAGGGACATGGTTGGTCGTGCCAAAACGGGG ACTGGTAAAACTTTGGCATTTGGAATCCCCATAATGGATGCAATTATTCGTCACAACGAG AAGTACAAGCCTGGTAAGTTTCCATTGGCTATTGTCTTGGCGCCAACAAGAGAACTTGCA AAACAGGTTGAGAGGGAGTTCCTTGATTCCTCCCCTTTGGAAACGCTGTGTGTATATGGA GGGACTCCAATTATGCAGCAAATAAAACAACTTAATTATGGTGTTGATGTGGTCATTGGG ACACCTGGACGTGTGATTGATCTGCTAAAAAGGGGTGCTCTTAGTTTGGCAGAGATCCGG TTTGTTGTTCTCGATGAAGCAGATCAGATGTTGTCCGTCGGGTTCGATAAAGACGTTGAA ACAATTTTGGAGAGAGTGCCCCCGCAACATCAAACATTGATGTTCTCTGCGACAATGCCA ACATGGATACGGAAGCTCACACAGAAGTTCCTCAACAGTCCTGTTACAGTGGACCTTGTT GGTGAGGATGACCAAAAGCTGGCTGAAGGAATTAGTCTGCTCTCTGTCTCTTCGGAAAAC CGTGAAAAACCAGCTGTTCTTGGGAAATTGATTAAGGAACATGCAAAAGGTGGCAAGTGC ATTGTTTTTACACAAACAAAAAGGGATGCAGATAGATTGTCACACAATATGAGTCGAAGT TTCCAATGTGAGGCGCTTCATGGGGATATCTCTCAATCTGAAAGAGAGAGGACACTGGCA GGATTTCGGGATGGGCGGTTTAATATATTGATTGCTACTGATGTCGCTTCTCGTGGATTG GATATCCCAAATGTAGATCTGGTGATACATTTCGAATTGCCAAATTCGTCAGAGATATTC GTTCACAGATCTGGCCGAACTGGCCGTGCTGGGAAGAAGGGCACTGCAATTGTGATGTAC AACTATGAACAAAGTAGAGCTGTGCGGGTCATTGAACGTGACGTAGGATGCAAGTTTACG GAGCTTCCAAAAATTAATGTTGAGGGATCCGACTTGCTGGGTGGTGGATTTGACTCCTTC GGGGGTGGAGGTGGTGGGTATGGTGGCTCAAACTATGGGCGCTCACGAGGGGGCTTTGGT GGACGTGGCGGTGGTGGTGGTTTTGGCCGATCAGGCGGTGGAGGATTTGGCAATTCTGGG TTTGGCCGCTCAAGTGGTGGATTTGGTGACTCGGGATTTGGCCGCTCCGGGGGTGGAGGG TTTGGTGACTCAGGATTTGGCAGGTCAGGTGGTGGCGGAGGATTCAGTGACTCAGGATTT GGCCGGTCTGGTGGCAGCGGTGGAGGATTCAGTGATTCTGGTTCAGGTCGTTTCGGTGGC GGTTTTGGTAGTTCTCGCTCAGGTAGTTTTGGTGGCTTTGGCGACAAGGACTCACGATAG

Peptide Sequence

PEP ID	Zm00001d041480_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:3:122677055:122681572:-1 gene:Zm00001d041480 transcript:Zm00001d041480_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:DEAD-box ATP-dependent RNA helicase 53
Sequence	MYAVLRRAAPLRRRAVSALAAALLQQQPAALGAVAPRAPTPLPAAAWFHSSPAWLGFRDT TELAARAEFAAEEGLFYEDDSRAPAGGPAAEGLEIAKLGISSKIVERLASKGITKLFPIQ RAVLEPVMQGRDMVGRAKTGTGKTLAFGIPIMDAIIRHNEKYKPGKFPLAIVLAPTRELA KQVEREFLDSSPLETLCVYGGTPIMQQIKQLNYGVDVVIGTPGRVIDLLKRGALSLAEIR FVVLDEADQMLSVGFDKDVETILERVPPQHQTLMFSATMPTWIRKLTQKFLNSPVTVDLV GEDDQKLAEGISLLSVSSENREKPAVLGKLIKEHAKGGKCIVFTQTKRDADRLSHNMSRS FQCEALHGDISQSERERTLAGFRDGRFNILIATDVASRGLDIPNVDLVIHFELPNSSEIF VHRSGRTGRAGKKGTAIVMYNYEQSRAVRVIERDVGCKFTELPKINVEGSDLLGGGFDSF GGGGGGYGGSNYGRSRGGFGGRGGGGGFGRSGGGGFGNSGFGRSSGGFGDSGFGRSGGGG FGDSGFGRSGGGGGFSDSGFGRSGGSGGGFSDSGSGRFGGGFGSSRSGSFGGFGDKDSR

Transcript Sequence

Transcript ID	Zm00001d041480_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:122677055:122681572:-1 gene:Zm00001d041480 gene_biotype:protein_coding transcript_biotype:protein_coding description:DEAD-box ATP-dependent RNA helicase 53
Sequence	ATTCCGCTTCTCGTCGTCTCGCCTCGTCCGTCCCCTCCCCATACGACAGCCACCCTCACA AAACCCTAAACCCTAGCCGCCGCCGCCGCCGCCGCCGACGCCGAAGCGGTACAGCCATGT ACGCCGTCCTCCGCCGCGCGGCGCCCCTCAGGCGGCGTGCCGTGTCCGCGCTCGCCGCCG CGCTGCTCCAGCAGCAGCCGGCGGCGCTGGGAGCTGTAGCCCCGCGGGCGCCGACGCCGC TCCCGGCGGCCGCGTGGTTCCACTCCTCGCCGGCGTGGCTTGGTTTCCGGGATACCACAG AGTTGGCGGCGCGCGCGGAGTTCGCTGCGGAGGAAGGTTTGTTCTATGAGGACGACAGTA GGGCGCCGGCCGGCGGCCCGGCGGCTGAGGGGCTCGAGATTGCCAAGCTCGGGATCTCGT CCAAGATCGTCGAAAGGCTCGCCAGCAAGGGCATCACCAAGCTGTTCCCTATCCAGAGGG CTGTCCTTGAGCCAGTAATGCAAGGAAGGGACATGGTTGGTCGTGCCAAAACGGGGACTG GTAAAACTTTGGCATTTGGAATCCCCATAATGGATGCAATTATTCGTCACAACGAGAAGT ACAAGCCTGGTAAGTTTCCATTGGCTATTGTCTTGGCGCCAACAAGAGAACTTGCAAAAC AGGTTGAGAGGGAGTTCCTTGATTCCTCCCCTTTGGAAACGCTGTGTGTATATGGAGGGA CTCCAATTATGCAGCAAATAAAACAACTTAATTATGGTGTTGATGTGGTCATTGGGACAC CTGGACGTGTGATTGATCTGCTAAAAAGGGGTGCTCTTAGTTTGGCAGAGATCCGGTTTG TTGTTCTCGATGAAGCAGATCAGATGTTGTCCGTCGGGTTCGATAAAGACGTTGAAACAA TTTTGGAGAGAGTGCCCCCGCAACATCAAACATTGATGTTCTCTGCGACAATGCCAACAT GGATACGGAAGCTCACACAGAAGTTCCTCAACAGTCCTGTTACAGTGGACCTTGTTGGTG AGGATGACCAAAAGCTGGCTGAAGGAATTAGTCTGCTCTCTGTCTCTTCGGAAAACCGTG AAAAACCAGCTGTTCTTGGGAAATTGATTAAGGAACATGCAAAAGGTGGCAAGTGCATTG TTTTTACACAAACAAAAAGGGATGCAGATAGATTGTCACACAATATGAGTCGAAGTTTCC AATGTGAGGCGCTTCATGGGGATATCTCTCAATCTGAAAGAGAGAGGACACTGGCAGGAT TTCGGGATGGGCGGTTTAATATATTGATTGCTACTGATGTCGCTTCTCGTGGATTGGATA TCCCAAATGTAGATCTGGTGATACATTTCGAATTGCCAAATTCGTCAGAGATATTCGTTC ACAGATCTGGCCGAACTGGCCGTGCTGGGAAGAAGGGCACTGCAATTGTGATGTACAACT ATGAACAAAGTAGAGCTGTGCGGGTCATTGAACGTGACGTAGGATGCAAGTTTACGGAGC TTCCAAAAATTAATGTTGAGGGATCCGACTTGCTGGGTGGTGGATTTGACTCCTTCGGGG GTGGAGGTGGTGGGTATGGTGGCTCAAACTATGGGCGCTCACGAGGGGGCTTTGGTGGAC GTGGCGGTGGTGGTGGTTTTGGCCGATCAGGCGGTGGAGGATTTGGCAATTCTGGGTTTG GCCGCTCAAGTGGTGGATTTGGTGACTCGGGATTTGGCCGCTCCGGGGGTGGAGGGTTTG GTGACTCAGGATTTGGCAGGTCAGGTGGTGGCGGAGGATTCAGTGACTCAGGATTTGGCC GGTCTGGTGGCAGCGGTGGAGGATTCAGTGATTCTGGTTCAGGTCGTTTCGGTGGCGGTT TTGGTAGTTCTCGCTCAGGTAGTTTTGGTGGCTTTGGCGACAAGGACTCACGATAGACCT ATAACTAATAACAGCTATAGAATTATGGACATCCTGAGCCAGATTCAGCTTGGTCATGCG GTATATCACAAAGGAGATCGAGATTGTTGCGGACCCTATCCATGAACACCTCGGAGAGGG CATAAGGCTGGGTGAGGCGGGTCCTTCGATAGGCAAAAATAATCACGTGCCTTGTTTATT AGTGTTCTTTTCTGTTCGTTTTTTCATTTGCTTCTGCAAGTTCTAGCTCTAGATCATACC TGTAAAATATGCAGAGGTCTTTTGCGGATGATATTCTTATATCGTTTTTGGTAGTCGCGC TGTACTGTACCGTGTGATGATTATGGAGCTGCTTTGTAGGCCGTTTTTAACCTGATATGA TGATCTTGATTATTGGCCATTTTAGCTC