Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d041474_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:3:122398912:122402298:-1 gene:Zm00001d041474 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein LSD1
Sequence	ATGTTCCGATGTCTTGCTGGTTGGATGAGGAGGGTACGACGCTCTGTGGAGAGATCTAAT CGCGCTGGTAAACTGGGGCGATCGGTGTGGGGGAATCGGATAGCGTGGATGGGATTTGGG ATTGGAAGAGAAGCTGGAGGATGCCTTTTTTCCCCTGTCCCCAAGCTTTCTGTGGATGAC GGTGATAATCGTGGACGAGCTAAGCTCATTGAGTGTCTGGCTGATGTGGGATTGGGTGGC ATATGCTGGATTGCTAACTGTTCCATCTGGTGCACCAAGAATTGGACTGCACTGGGGTTG GGATTGGGATTGGGATGGGATTGCTTTGCCTTTGATTGTGTATATGCTTATTATGTGCTC ATCCGCTGTGGCTTTGGCCGGAACTTTGCAGACATGCAGAGCCAGATAGTGTGCCACGGG TGCAGGACCCTTCTGTTCTACCCAAGAGGTGCTCCGAGCGTGTGTTGTGCGGTATGCCAT GTGGTCACCAATGTGCCGCCTCCAGCAATGGAGATGGCTCGACTTATATGTGGTGGCTGC CAGACATTATTGATGTATGCTCGCAGTGCAACAACTGTAAGATGCTCATGTTGTGACACA GTCAATCTTGTCAGACCAGTGAGTAGCATAGCTCATGTGAACTGTGGCCAGTGCCAAACA GTGTTGATGTATCCATACGGAGCACCGTCTGTCAAATGTGCTGTTTGCAACTTCATTACA AATGTTGGCGGGGTGACTCCCATGATACCTTTGCCACCACCAGCACTAACTGCATCAAGT GGAACTTCATATATCATCCCGTCAATTTCCGTGCCGACGAATCAACCGCGGAATGTAACT GTTGTCGTTGAAAACCCAATGACAGTAGATGACAAGGGAAAATTGGTGAGCAATGTTGTA GTAGGGGTTACGAGCGGCGGGAAAAAGTGA

Peptide Sequence

PEP ID	Zm00001d041474_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:3:122398912:122402298:-1 gene:Zm00001d041474 transcript:Zm00001d041474_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein LSD1
Sequence	MFRCLAGWMRRVRRSVERSNRAGKLGRSVWGNRIAWMGFGIGREAGGCLFSPVPKLSVDD GDNRGRAKLIECLADVGLGGICWIANCSIWCTKNWTALGLGLGLGWDCFAFDCVYAYYVL IRCGFGRNFADMQSQIVCHGCRTLLFYPRGAPSVCCAVCHVVTNVPPPAMEMARLICGGC QTLLMYARSATTVRCSCCDTVNLVRPVSSIAHVNCGQCQTVLMYPYGAPSVKCAVCNFIT NVGGVTPMIPLPPPALTASSGTSYIIPSISVPTNQPRNVTVVVENPMTVDDKGKLVSNVV VGVTSGGKK

Transcript Sequence

Transcript ID	Zm00001d041474_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:122398912:122402298:-1 gene:Zm00001d041474 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein LSD1
Sequence	GACCGAATAACCACCCGTCTGCCGCTGTGCCGCACCCCGCACGAGACCCGTCCTTGAGGG GCACGTCCTAGATCGGTGGCGCCTGCCTCTCGCCGCCGATACGGTGCCTCTCGCGGTCTC GCTCCCCCTCGCAGGTCTTTTGGTTTTTTTAGTTCCTCCCTTTGCTTCTTGGAGGTGTTT GTTGCCGTCTCACCCGCAGTTCTTGAGGTACGCACGCAGTAATCCGGCTTCTTTCTATGT TCCGATGTCTTGCTGGTTGGATGAGGAGGGTACGACGCTCTGTGGAGAGATCTAATCGCG CTGGTAAACTGGGGCGATCGGTGTGGGGGAATCGGATAGCGTGGATGGGATTTGGGATTG GAAGAGAAGCTGGAGGATGCCTTTTTTCCCCTGTCCCCAAGCTTTCTGTGGATGACGGTG ATAATCGTGGACGAGCTAAGCTCATTGAGTGTCTGGCTGATGTGGGATTGGGTGGCATAT GCTGGATTGCTAACTGTTCCATCTGGTGCACCAAGAATTGGACTGCACTGGGGTTGGGAT TGGGATTGGGATGGGATTGCTTTGCCTTTGATTGTGTATATGCTTATTATGTGCTCATCC GCTGTGGCTTTGGCCGGAACTTTGCAGACATGCAGAGCCAGATAGTGTGCCACGGGTGCA GGACCCTTCTGTTCTACCCAAGAGGTGCTCCGAGCGTGTGTTGTGCGGTATGCCATGTGG TCACCAATGTGCCGCCTCCAGCAATGGAGATGGCTCGACTTATATGTGGTGGCTGCCAGA CATTATTGATGTATGCTCGCAGTGCAACAACTGTAAGATGCTCATGTTGTGACACAGTCA ATCTTGTCAGACCAGTGAGTAGCATAGCTCATGTGAACTGTGGCCAGTGCCAAACAGTGT TGATGTATCCATACGGAGCACCGTCTGTCAAATGTGCTGTTTGCAACTTCATTACAAATG TTGGCGGGGTGACTCCCATGATACCTTTGCCACCACCAGCACTAACTGCATCAAGTGGAA CTTCATATATCATCCCGTCAATTTCCGTGCCGACGAATCAACCGCGGAATGTAACTGTTG TCGTTGAAAACCCAATGACAGTAGATGACAAGGGAAAATTGGTGAGCAATGTTGTAGTAG GGGTTACGAGCGGCGGGAAAAAGTGACGGCATATCACAACCCGTATAGCTTTGTCCAAAC TATCTAAAAAGGGTTTAAGAATACATACCTTGTATCATACTGCTGTTTGGCGATCGGCTG CTCGACGGAGGAATCCCCCTCCCTGGAGAGCGTAGTGGCAAGGCAGCGCTGCTTTCGCCA CTGCGATCGTGCTAGAACGAGCCAAAAAAAAAAACGAAGTGCGGGTGTGCATACTCAGAG TATATCTGTAGCTTGTTACCCCTTGATTCTTTTGTATGTAATATGGGCTCTGCCTGACTT TCACTGTGTGATCAAATTTCCAAGCCCGTGGGCGCTGTTGCTGCGTGCCTTGTTATTAGT GAATAACAAACATTGCAAATGGCTCTTGAAATACAGTGTGTGTGTGTTTTAATCTCTCTG CATTTATGTTAATCAGCAGGTGCCACCATTTGCTGTTCCAGACTGATAATGCAGAGTTTG TATCCACGTTCTTTGGAGAAAACATTTGAGGCTCATACGCTGTTTC