Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d041464_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:3:121900435:121902537:1 gene:Zm00001d041464 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein mitochondrial
Sequence

ATGGCCGCCGCGGCAGCTACCAAGGTCACCGCGGCGGCAGCAGCCTCCGCAGTGTTCCGT
AGCAACAAGGAGCTCACCCGCCTCGCGCGGTCGGGCCAGCTGGCGGCGGCGCGCCGCCTC
TTCGACGCCATGCCTCTCCGCAACACCGTCACCTACAACGCCATGCTCTCCGCGCTCGCG
CGCCACGGGCGTATCGACGAGGCTCGGGCTCTCTTCGACGGGATGCCCGGCAGAAACACT
GTCTCCTGGAACGCGATGATCGCGGCCCTCTCGGATCACGGCCGCGTCGCGGACGCCCGG
AGCCTCTTCGACCGGATGCCTGTCCGGGACGAGTTCTCGTGGACGGTGATGGTCTCCTGC
TACGCGCGCGGGGGGGATCTCGAGCTCGCCCGGGACGTGCTGGACCGAATGCCTGGTGAC
AAGTGCACGGCCTGCTACAACGCCATGATCTCCGGGTACGCCAAGAACGGCAGGTTCGAC
GATGCAATGAAGCTGCTGCGGGAGATGCCGGCTCCGGACCTTGTTTCATGGAATTCAGCA
CTAGCGGGGCTCACTCAGAGTGGGGAAATGGTGCGGGCAGTTCAATTCTTCGACGAAATG
GTGAAGGACATGACGTCCTGGAATTTGATGCTGGCGGGTTTTGTGCGAACTGGAGATTTG
AATGCGGCCTCTAGCTTCTTTGCAAAGATTGAATCACCTAATGTCATCTCTTGGGTGACC
TTGCTCAATGGGTATTGCCGTGCGGGGAGGATTGCTGATGCTAGGGACCTGTTCGACAGA
ATGCCTGAGCGAAATGTTGTGGCTTGGAACGTGATGCTTGATGGGTATGTGCATCTCTCG
CCCATAGAAGAGGCCTGTAAACTGTTCGATGAGATGCCAATTAAGAACTCAATCTCATGG
ACAACAATAATAAGCGGATTAGCACGAGCTGGGAAACTCCAGGAAGCGAAGGATCTTCTC
GACAAGATGTCTTTCAACTGTGTGGCAGCAAAGACTGCGTTGATGCATGGTTATTTACAA
CGCAACATGGCTGATGATGCTCGTCGGATTTTTGATGGAATGGAGGTGCATGACACAGTG
TGTTGGAATACCATGATCTCTGGTTATGTCCAATGTGGAATACTTGAAGAGGCAATGTTG
TTATTCCAGCGAATGCCGAATAAGGATATGGTTTCCTGGAACACCATGATTGCTGGCTAT
GCTCAGGATGGCCAAATGCACAAGGCAATCGGTATTTTCAGGAGGATGAACAGGAGAAAT
ACGGTATCTTGGAACTCAGTTATCTCTGGATTTGTTCAGAATGATCGCTTTGTTGATGCA
CTCCATCATTTCATGCTTATGAGAAGGGGCACAAATAGGGCTGACTGGTCTACCTATGCA
AGCTGTCTCAGAGCATGTGCAAACCTGGCTGTTTTGCATGTTGGGAGGCAACTCCACAAT
CTTCTTGTTAGGAGTGGCCATATCAACGATTCATTTGCTGGAAATGCCTTGATTTCCACA
TATGCGAAGTGTGGAAGGATATTGGAAGCAAAGCAAATCTTTGATGAGATGGTATACAAG
GATATTGTTTCATGGAATGCGTTGATTGATGGCTATGCTTCTAACGGTCAAGGGACTGAA
GCAATCGCAGTCTTCAGGGAAATGGAAGCCAATGGTGTGAGACCTGATGAAGTCACATTT
GTTGGTATCTTGTCAGCTTGCAGTCATGCCGGGTTGATTGATGAAGGATTGTTTTTTTTC
TACTCAATGACAAAAGAGTACTTACTGAAGCCAGTCGCTGAGCACTATGCTTGCATGGTA
GACTTGCTTGGAAGGGCTGGGAAACTGAACGAGGCATTTGAACTTGTGCAAGGAATGCAG
ATCCAACCAAATGCTGGCGTCTGGGGTGCATTGCTTGGAGCATGCCACATGCACAAGAAC
CATGAACTTGCACAGCTGGCAGCTGAGAGGTTGTCTGAATTGGAACCTCGCAAGGCCTCA
AATTATGTGCTGCTGTCAAACATCAGTGCCGAAGCAGGTAAGTGGGACGAATCTGAAAAG
GCTCGGGCTTCAATCAAAGAGAAGGGAGTAAATAAGCCACCAGGTTTAGCTGGATCAACA
TAG

Peptide Sequence

PEP ID

Zm00001d041464_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:3:121900435:121902537:1 gene:Zm00001d041464 transcript:Zm00001d041464_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein mitochondrial
Sequence

MAAAAATKVTAAAAASAVFRSNKELTRLARSGQLAAARRLFDAMPLRNTVTYNAMLSALA
RHGRIDEARALFDGMPGRNTVSWNAMIAALSDHGRVADARSLFDRMPVRDEFSWTVMVSC
YARGGDLELARDVLDRMPGDKCTACYNAMISGYAKNGRFDDAMKLLREMPAPDLVSWNSA
LAGLTQSGEMVRAVQFFDEMVKDMTSWNLMLAGFVRTGDLNAASSFFAKIESPNVISWVT
LLNGYCRAGRIADARDLFDRMPERNVVAWNVMLDGYVHLSPIEEACKLFDEMPIKNSISW
TTIISGLARAGKLQEAKDLLDKMSFNCVAAKTALMHGYLQRNMADDARRIFDGMEVHDTV
CWNTMISGYVQCGILEEAMLLFQRMPNKDMVSWNTMIAGYAQDGQMHKAIGIFRRMNRRN
TVSWNSVISGFVQNDRFVDALHHFMLMRRGTNRADWSTYASCLRACANLAVLHVGRQLHN
LLVRSGHINDSFAGNALISTYAKCGRILEAKQIFDEMVYKDIVSWNALIDGYASNGQGTE
AIAVFREMEANGVRPDEVTFVGILSACSHAGLIDEGLFFFYSMTKEYLLKPVAEHYACMV
DLLGRAGKLNEAFELVQGMQIQPNAGVWGALLGACHMHKNHELAQLAAERLSELEPRKAS
NYVLLSNISAEAGKWDESEKARASIKEKGVNKPPGLAGST

Transcript Sequence

Transcript ID

Zm00001d041464_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:121900435:121902537:1 gene:Zm00001d041464 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein mitochondrial
Sequence

ATGGCCGCCGCGGCAGCTACCAAGGTCACCGCGGCGGCAGCAGCCTCCGCAGTGTTCCGT
AGCAACAAGGAGCTCACCCGCCTCGCGCGGTCGGGCCAGCTGGCGGCGGCGCGCCGCCTC
TTCGACGCCATGCCTCTCCGCAACACCGTCACCTACAACGCCATGCTCTCCGCGCTCGCG
CGCCACGGGCGTATCGACGAGGCTCGGGCTCTCTTCGACGGGATGCCCGGCAGAAACACT
GTCTCCTGGAACGCGATGATCGCGGCCCTCTCGGATCACGGCCGCGTCGCGGACGCCCGG
AGCCTCTTCGACCGGATGCCTGTCCGGGACGAGTTCTCGTGGACGGTGATGGTCTCCTGC
TACGCGCGCGGGGGGGATCTCGAGCTCGCCCGGGACGTGCTGGACCGAATGCCTGGTGAC
AAGTGCACGGCCTGCTACAACGCCATGATCTCCGGGTACGCCAAGAACGGCAGGTTCGAC
GATGCAATGAAGCTGCTGCGGGAGATGCCGGCTCCGGACCTTGTTTCATGGAATTCAGCA
CTAGCGGGGCTCACTCAGAGTGGGGAAATGGTGCGGGCAGTTCAATTCTTCGACGAAATG
GTGAAGGACATGACGTCCTGGAATTTGATGCTGGCGGGTTTTGTGCGAACTGGAGATTTG
AATGCGGCCTCTAGCTTCTTTGCAAAGATTGAATCACCTAATGTCATCTCTTGGGTGACC
TTGCTCAATGGGTATTGCCGTGCGGGGAGGATTGCTGATGCTAGGGACCTGTTCGACAGA
ATGCCTGAGCGAAATGTTGTGGCTTGGAACGTGATGCTTGATGGGTATGTGCATCTCTCG
CCCATAGAAGAGGCCTGTAAACTGTTCGATGAGATGCCAATTAAGAACTCAATCTCATGG
ACAACAATAATAAGCGGATTAGCACGAGCTGGGAAACTCCAGGAAGCGAAGGATCTTCTC
GACAAGATGTCTTTCAACTGTGTGGCAGCAAAGACTGCGTTGATGCATGGTTATTTACAA
CGCAACATGGCTGATGATGCTCGTCGGATTTTTGATGGAATGGAGGTGCATGACACAGTG
TGTTGGAATACCATGATCTCTGGTTATGTCCAATGTGGAATACTTGAAGAGGCAATGTTG
TTATTCCAGCGAATGCCGAATAAGGATATGGTTTCCTGGAACACCATGATTGCTGGCTAT
GCTCAGGATGGCCAAATGCACAAGGCAATCGGTATTTTCAGGAGGATGAACAGGAGAAAT
ACGGTATCTTGGAACTCAGTTATCTCTGGATTTGTTCAGAATGATCGCTTTGTTGATGCA
CTCCATCATTTCATGCTTATGAGAAGGGGCACAAATAGGGCTGACTGGTCTACCTATGCA
AGCTGTCTCAGAGCATGTGCAAACCTGGCTGTTTTGCATGTTGGGAGGCAACTCCACAAT
CTTCTTGTTAGGAGTGGCCATATCAACGATTCATTTGCTGGAAATGCCTTGATTTCCACA
TATGCGAAGTGTGGAAGGATATTGGAAGCAAAGCAAATCTTTGATGAGATGGTATACAAG
GATATTGTTTCATGGAATGCGTTGATTGATGGCTATGCTTCTAACGGTCAAGGGACTGAA
GCAATCGCAGTCTTCAGGGAAATGGAAGCCAATGGTGTGAGACCTGATGAAGTCACATTT
GTTGGTATCTTGTCAGCTTGCAGTCATGCCGGGTTGATTGATGAAGGATTGTTTTTTTTC
TACTCAATGACAAAAGAGTACTTACTGAAGCCAGTCGCTGAGCACTATGCTTGCATGGTA
GACTTGCTTGGAAGGGCTGGGAAACTGAACGAGGCATTTGAACTTGTGCAAGGAATGCAG
ATCCAACCAAATGCTGGCGTCTGGGGTGCATTGCTTGGAGCATGCCACATGCACAAGAAC
CATGAACTTGCACAGCTGGCAGCTGAGAGGTTGTCTGAATTGGAACCTCGCAAGGCCTCA
AATTATGTGCTGCTGTCAAACATCAGTGCCGAAGCAGGTAAGTGGGACGAATCTGAAAAG
GCTCGGGCTTCAATCAAAGAGAAGGGAGTAAATAAGCCACCAGGTTTAGCTGGATCAACA
TAG