Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d041402_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:3:116829141:116832152:1 gene:Zm00001d041402 gene_biotype:protein_coding transcript_biotype:protein_coding description:Disulfide oxidoreductase/ monooxygenase/ oxidoreductase

Sequence

ATGGACCACCACTTCACTGAGATAGAGGGGAAGATGGCGCACGAGCCACTGGCACACAGC
TCCACCTTCTCCGATGAGACGAAAGACAAAATGGAGCACGATTCACTGGTGTACAGTCCA
CGCAGCATCGCGAGGGCCACAACCACCGGCATCCCTGTCGGCGATCAAGGCGTGGCCGTG
CTACGTGGGCCGCTTATCGTGGGTGCAGGGCCGGCGGGTCTGGCATGCGCGGCGTTGCTC
ACCATGTTATACATTCCCTACGTGCTCCTAGAGCGCGACGTGTGCGTAGCCTCAATGTGG
CACCGCCGCACGTACCGCAGGTTGTGTCTGCACCTACCCAAGCGCTACTGTGAGCTCCCG
CTCATGCACTTCCCACGCACCTACCCCACATATCCAACCCGGCAGCAGTTCCTTGTCTAC
CTCAATGAGTACATGCGCGCATTTGGCATCCGCCCATTTTTCAGCCTCGAGGTTGTCGCT
GCCGAGTACAACGGTGAATACTGGTGTGTCCGCACCAAAGATGTCATCCCCACTGGCACT
CTCAACGGCCAAAGCGGCGAGGAGTCTATCCGAGAGTACCGCTCCAAATGGCTGATCGTT
GCCACAGGAGAGAACGCCGAGCCTGTTGTGCCTGACATGCCGGGAATCCATAACTTCAAG
GGTCAAGTAATGCACTCATGTGACTACCGTAGCGGCGAGTCCTTCCAAGGCAAGAAGGTG
CTAGTCGTTGGCTGCGGTAACTCTGGCATGGAGGTGTCTCTCGACCTCGCTAACCACAAC
GTGCACACCTCGATGGCTGTTCGTCGTTCGGGGCACGTACTTCCAAGAGAGGTCATGGGG
ATCTCAACTTTTAGTTTGTCTGTGTGGCTCCTCAAGTTTCTACGTGTCCAAATAGTGGAC
CGGATTCTTCTTCTACTCGCTTGGTTCATTTTAGGAGACACTGCACAAATTGGTATTCCT
CGGCCTAGCATGGGTCCAATGGAGCTCAAACAAGTGTCTGGTAAGACACCGGTGCTTGAC
GTGGGGACGATAGCACAGATTAAGTCCGGCAACATTAAAGTATTTCCTGCAATTCGAAGT
TTCCAAGAATATGGTGTAGAGTTTACAAATGGTAGGATTGAATCATTTGATGTTGTGATT
CTTGCCACAGGTTATAAGAGTAATGTTCCTTATTGGTTGAAGGAGAATGAATTTTTTTCA
CAGCAAAGTGGATTTCCAAACAAACCAAATGAATGGAAAGGAAAGGATGGACTCTATGCT
GCTGGGTTCTCAAGGCGTGGTCTACTTGGTGTGTCTATGGATGCCACCAAAATTGCAGAG
GATATTGCGCAGTCTTATAATAATATATATAAGCTACAAAGATCATAA

Peptide Sequence

PEP ID

Zm00001d041402_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:3:116829141:116832152:1 gene:Zm00001d041402 transcript:Zm00001d041402_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Disulfide oxidoreductase/ monooxygenase/ oxidoreductase

Sequence

MDHHFTEIEGKMAHEPLAHSSTFSDETKDKMEHDSLVYSPRSIARATTTGIPVGDQGVAV
LRGPLIVGAGPAGLACAALLTMLYIPYVLLERDVCVASMWHRRTYRRLCLHLPKRYCELP
LMHFPRTYPTYPTRQQFLVYLNEYMRAFGIRPFFSLEVVAAEYNGEYWCVRTKDVIPTGT
LNGQSGEESIREYRSKWLIVATGENAEPVVPDMPGIHNFKGQVMHSCDYRSGESFQGKKV
LVVGCGNSGMEVSLDLANHNVHTSMAVRRSGHVLPREVMGISTFSLSVWLLKFLRVQIVD
RILLLLAWFILGDTAQIGIPRPSMGPMELKQVSGKTPVLDVGTIAQIKSGNIKVFPAIRS
FQEYGVEFTNGRIESFDVVILATGYKSNVPYWLKENEFFSQQSGFPNKPNEWKGKDGLYA
AGFSRRGLLGVSMDATKIAEDIAQSYNNIYKLQRS

Transcript Sequence

Transcript ID

Zm00001d041402_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:116829141:116832152:1 gene:Zm00001d041402 gene_biotype:protein_coding transcript_biotype:protein_coding description:Disulfide oxidoreductase/ monooxygenase/ oxidoreductase

Sequence

ACGATCCATATATCCCTTCCTCGTATATCCTTTCCTGAGTAGGAGAGAGAGTTGAGTTAG
GAGTTGTTGTGCTGATCATCTCGGTCGACCGAGAGATGGACCACCACTTCACTGAGATAG
AGGGGAAGATGGCGCACGAGCCACTGGCACACAGCTCCACCTTCTCCGATGAGACGAAAG
ACAAAATGGAGCACGATTCACTGGTGTACAGTCCACGCAGCATCGCGAGGGCCACAACCA
CCGGCATCCCTGTCGGCGATCAAGGCGTGGCCGTGCTACGTGGGCCGCTTATCGTGGGTG
CAGGGCCGGCGGGTCTGGCATGCGCGGCGTTGCTCACCATGTTATACATTCCCTACGTGC
TCCTAGAGCGCGACGTGTGCGTAGCCTCAATGTGGCACCGCCGCACGTACCGCAGGTTGT
GTCTGCACCTACCCAAGCGCTACTGTGAGCTCCCGCTCATGCACTTCCCACGCACCTACC
CCACATATCCAACCCGGCAGCAGTTCCTTGTCTACCTCAATGAGTACATGCGCGCATTTG
GCATCCGCCCATTTTTCAGCCTCGAGGTTGTCGCTGCCGAGTACAACGGTGAATACTGGT
GTGTCCGCACCAAAGATGTCATCCCCACTGGCACTCTCAACGGCCAAAGCGGCGAGGAGT
CTATCCGAGAGTACCGCTCCAAATGGCTGATCGTTGCCACAGGAGAGAACGCCGAGCCTG
TTGTGCCTGACATGCCGGGAATCCATAACTTCAAGGGTCAAGTAATGCACTCATGTGACT
ACCGTAGCGGCGAGTCCTTCCAAGGCAAGAAGGTGCTAGTCGTTGGCTGCGGTAACTCTG
GCATGGAGGTGTCTCTCGACCTCGCTAACCACAACGTGCACACCTCGATGGCTGTTCGTC
GTTCGGGGCACGTACTTCCAAGAGAGGTCATGGGGATCTCAACTTTTAGTTTGTCTGTGT
GGCTCCTCAAGTTTCTACGTGTCCAAATAGTGGACCGGATTCTTCTTCTACTCGCTTGGT
TCATTTTAGGAGACACTGCACAAATTGGTATTCCTCGGCCTAGCATGGGTCCAATGGAGC
TCAAACAAGTGTCTGGTAAGACACCGGTGCTTGACGTGGGGACGATAGCACAGATTAAGT
CCGGCAACATTAAAGTATTTCCTGCAATTCGAAGTTTCCAAGAATATGGTGTAGAGTTTA
CAAATGGTAGGATTGAATCATTTGATGTTGTGATTCTTGCCACAGGTTATAAGAGTAATG
TTCCTTATTGGTTGAAGGAGAATGAATTTTTTTCACAGCAAAGTGGATTTCCAAACAAAC
CAAATGAATGGAAAGGAAAGGATGGACTCTATGCTGCTGGGTTCTCAAGGCGTGGTCTAC
TTGGTGTGTCTATGGATGCCACCAAAATTGCAGAGGATATTGCGCAGTCTTATAATAATA
TATATAAGCTACAAAGATCATAAGAACAAATGATATTTAACTATTTATCAATAATTTAGC
TATCATCATTTGAGAGTTTTGTAAATATATGTACTAGTCTATTTGCATAAATTATAAGAG
ATGGATATGCTAGATAACAAATACTAGGCTAGCTTATCTATCAACGCACTCATTATATAA
TTGACATAGGCTAGTACATGTCACATTTTAGAGGTCCAACAAAATAGTTGATAGGATTGA
TTTATTGCATGCTTTTATTTCTTTTTAATTTGGCAAATATTGTAAGTCATTTTTGTTATT
ATCAATCAATTGTAATGGGTAATGTATGGACGTTTTCATTCTTATGGCTATATTATTTGT
TTATTGCAAAATAA