Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d041395_T009
CDS Infomation

cds chromosome:B73_RefGen_v4:3:116054805:116080626:1 gene:Zm00001d041395 gene_biotype:protein_coding transcript_biotype:protein_coding description:TRAF-like superfamily protein
Sequence

ATGGATCCAAGTGTGCGTCGACACATGACAAGGGAAAAGACTGAAACTATATTGAAAGTT
ATAGTGAAACAATTCTTTATAGAGAAAGAAGTTACATCAACCTTGGTAATTGACTCTCTA
TATAGTGGACTTAAGGCACTTGAATACCAGAGCAAGAACAAAAAGGCGATACCTAAACTA
ACAGAGACAGATGCTCGGAGCACTCCAATGGTACTTATTGATCAGGACATGTTTGTTTTG
GCTGATGATGTAATATTTCTGCTTGAAAGAGCTGCATTGGACACACTGCCACACCAACAT
TTGCCCACAAAAGATGATAAAAGTTCGCAAAACCGCACAAAGGATGGCAACTCAGGTCAG
GAGTTCAGCAAAGATTCTATTGAGCGTGATGATAGACGACTTATAGAGCTAGGCTGGAAG
ACATTGGAGCTTTTTTCCTTAGCTCATATATTCAGCCGAATACAAGTGGCACATCAAGAG
GCTGTGGCTTTGAAGCGCCAAGAGGAACTTATTCGTGAAGAAGAAGAAGCTGGGCTAGCT
GAAATTGAACTCAAGGCAAAGCGTAGTGCCGCTGAAAAGGAAAAACGTGCCAAGAAAAAA
CAGGCAAAACAGAAGAAAAATAGTCGAAAAGGTAATAAGGGGAAAAGTGGCAAGTCCAAC
ATCAATAAGGAAATAATTATGGACCACAGTCATTCAGATGATAGAATATTGGATGATTTT
TGTGGACAAATTGAAGAGATGCCCTTAAATGCTGACAACCCTGAAGAAGTTTCTGATATA
TCTGACAGTAGAGACGATAATTCAGACATGCTTCATGTTGATATTGAAGACCGTGAATCT
AGCCCTGTTAATTGGGAGATAGATGCTTCAGAAACTCAAACTACTATTCCTGGAAGTAGT
GAGGTGCAAAATGACCATGCAGGAAAGAGGACCTCTACTGTGGATGATAGCTCATCGTCT
TGTTCATCTGACTCAGTGCCTTCAGTTACTGTGAATGGATCATATAAAGGAGGTGCCTGG
ACAAGCGTCAGATCCTCATCCAATAGGGGAAACAACAGGAGGAATAAGGATACTGAAGCA
CGGGCAGGATTTGCACAAGGTGGATCATGTTCATCGCATAATGGTTTTATAGGCTCTGGC
AGCAATGCCTCTGGCCACTCAAAGGAAAGACACGAACCTGAGGATGATAAAGTTGTCTTG
CAGAGGAAGCAACATGCACAATGGAACATTGATATCATTAGCTCCTCCAAGTCAAGAATG
GCAGAGTCTTCATTTTCTTCTGTGAGCTCTATTAAGAAGCAACCTCAACCAAATTTTTTG
CTAGAAAGCACCAATAGTTTGAATCACCGTGGAAGCGAAGCTTCTGGCACTGTGACTTCC
ACTACAACAGCGGGTGCCTCTTCAACCCCGGCCACTCAGTTAGTTTTGAATAAAGGACCT
GTATCCAGTGCTGCAACCCAGAATGAGAAGCCACTACCTCTGCAGGTGCTTGTACCATCC
AAATCTGAAGTGCAGAAGCAGGCTTCCCTAACTGGCAGTGCAACTACCGAGGCCGTTTCA
GTATCAAGGCCCTTGACTGCCCCACAAGTCCCTGCAGCAAAACAAAGTGCACCAGTCACT
TCAACAGCTCAGAATGCACCTTTTCTTTCTCGTTCAATGAGTGCTGTTGGGCGGTTGGGG
AATGAACCATCTGCCAATGCTCCTAGTTTCGTTCCCCGTTCACGAACATATCGCAATGCC
ATGATGGAGAAAAGTTCTGGTGGTGGAAGCTGTTTCACACATCAGCAAGGTTCATCGGAG
CAAGCAGTTGCACCATGGCAATCGATGTTTACATCGCAACCTTTCATTCGGCCATCAGAG
ACCTTGTCTTGGAAAGAGGAAACATTATTGAGATCTGGGTTTACATTTGGAACTGTGAAG
CCCGAGTCACTGAACCCATATCAGGGCAGAGAAGAGAACTCACAGCAAGCGAGCAGCAAC
AGCAGTGATTGTGCGCCATCGAGTTCAAACATCAGAAGCGAGATCGAGAAGCTGAATTTG
AGCGGAAGACCACGAAGCAAGCAACTGTTGTCAGAAATTTCGACCAGATTTACTCCCTAT
CAGCCACAAGGCTTGGTCGCTGATGAGTTCCCACACCTAGACATCATCAACGACTTGCTG
GATGAGGAGCAGAGTGACAGAAGAAGGGTTCTTCAACCTGATTTTGTTCAACAGTCCTAT
ATGCCTCATGGTGCCAGCACACCTGATTATGGTGAGCCATACTTGTTTGACCAGTCCGAG
CAATACTTCGATGAGGAGCCTCCAAGGTTTTATAGTCCATTGAGCAGTGCTCCTCGGAGG
TTGAGGGACCTGAGCTATTCGCACTTTGATCTCCCATCACACTCCAGCAGCAGCCAGTTT
GATGATCTGATGATGAGTCAGTGGCCATACAGCCGCACTGACATCTCCATGCCTAGTTTT
GGGTCAGACACAAGTGGCTACCCCTATCAGGTGTGGGATCTCGCGAATGGATCAAGCAGG
TACCCATCGTATCGCCCTGCCAATGGGCATTGA

Peptide Sequence

PEP ID

Zm00001d041395_P009
PEP Infomation

pep chromosome:B73_RefGen_v4:3:116054805:116080626:1 gene:Zm00001d041395 transcript:Zm00001d041395_T009 gene_biotype:protein_coding transcript_biotype:protein_coding description:TRAF-like superfamily protein
Sequence

MDPSVRRHMTREKTETILKVIVKQFFIEKEVTSTLVIDSLYSGLKALEYQSKNKKAIPKL
TETDARSTPMVLIDQDMFVLADDVIFLLERAALDTLPHQHLPTKDDKSSQNRTKDGNSGQ
EFSKDSIERDDRRLIELGWKTLELFSLAHIFSRIQVAHQEAVALKRQEELIREEEEAGLA
EIELKAKRSAAEKEKRAKKKQAKQKKNSRKGNKGKSGKSNINKEIIMDHSHSDDRILDDF
CGQIEEMPLNADNPEEVSDISDSRDDNSDMLHVDIEDRESSPVNWEIDASETQTTIPGSS
EVQNDHAGKRTSTVDDSSSSCSSDSVPSVTVNGSYKGGAWTSVRSSSNRGNNRRNKDTEA
RAGFAQGGSCSSHNGFIGSGSNASGHSKERHEPEDDKVVLQRKQHAQWNIDIISSSKSRM
AESSFSSVSSIKKQPQPNFLLESTNSLNHRGSEASGTVTSTTTAGASSTPATQLVLNKGP
VSSAATQNEKPLPLQVLVPSKSEVQKQASLTGSATTEAVSVSRPLTAPQVPAAKQSAPVT
STAQNAPFLSRSMSAVGRLGNEPSANAPSFVPRSRTYRNAMMEKSSGGGSCFTHQQGSSE
QAVAPWQSMFTSQPFIRPSETLSWKEETLLRSGFTFGTVKPESLNPYQGREENSQQASSN
SSDCAPSSSNIRSEIEKLNLSGRPRSKQLLSEISTRFTPYQPQGLVADEFPHLDIINDLL
DEEQSDRRRVLQPDFVQQSYMPHGASTPDYGEPYLFDQSEQYFDEEPPRFYSPLSSAPRR
LRDLSYSHFDLPSHSSSSQFDDLMMSQWPYSRTDISMPSFGSDTSGYPYQVWDLANGSSR
YPSYRPANGH

Transcript Sequence

Transcript ID

Zm00001d041395_T009
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:116054805:116080626:1 gene:Zm00001d041395 gene_biotype:protein_coding transcript_biotype:protein_coding description:TRAF-like superfamily protein
Sequence

GATTCTTTAGCTGAGTGGAGGTCAAGTGAGCAAGTTGAGAATGGAACACCATCCACTTCA
CCAGCATACTCAGACAATGATGATGATGACTGTGGACCTAGGCCTTCTGATCTTTATGGG
AAGTTTACATGGAGAATTGATAATTTCTCCCAAATCAACAAGAGAGAGCTAAGAAGTAAT
TCCTTTGATGTTGGTGGATTTAAGTGGTATATCTTAATTTACCCACAAGGATGTGATGTA
TGCAATCACCTCTCACTCTTTCTTTGTGTTGCCAACCATGATAAGCTACTCCCAGGATGG
AGTCACTTTGCGCAATTTACAATAGCTGTAATTAATAGAGACCCTAAGAAATCTAAGTAT
TCTGATACACTGCATCGGTTTTGGAAGAAAGAGCATGATTGGGGGTGGAAAAAGTTTATG
GAACTGTCAAAATTACATGATGGCTTTATTGTTGAGGATGTTCTTACCATCAAAGCCCAA
GTTCAAGTTATCAGGAGAAGACAGACCGTCCATTTCGTTGCCTTGATGGCCATTACCGAA
GGGAACTAATTAGGGTGTATCTATCAAATGTTGAACAAGTTTGCCGGCGCTTTATTGATG
AAAGAAGAAGCAAGCTTAGCAGGTTGATTGAGGATAAACTGGGGTGGTCCAGTTTCAGTG
GATTCTGGCTAGCAATGGATCCAAGTGTGCGTCGACACATGACAAGGGAAAAGACTGAAA
CTATATTGAAAGTTATAGTGAAACAATTCTTTATAGAGAAAGAAGTTACATCAACCTTGG
TAATTGACTCTCTATATAGTGGACTTAAGGCACTTGAATACCAGAGCAAGAACAAAAAGG
CGATACCTAAACTAACAGAGACAGATGCTCGGAGCACTCCAATGGTACTTATTGATCAGG
ACATGTTTGTTTTGGCTGATGATGTAATATTTCTGCTTGAAAGAGCTGCATTGGACACAC
TGCCACACCAACATTTGCCCACAAAAGATGATAAAAGTTCGCAAAACCGCACAAAGGATG
GCAACTCAGGTCAGGAGTTCAGCAAAGATTCTATTGAGCGTGATGATAGACGACTTATAG
AGCTAGGCTGGAAGACATTGGAGCTTTTTTCCTTAGCTCATATATTCAGCCGAATACAAG
TGGCACATCAAGAGGCTGTGGCTTTGAAGCGCCAAGAGGAACTTATTCGTGAAGAAGAAG
AAGCTGGGCTAGCTGAAATTGAACTCAAGGCAAAGCGTAGTGCCGCTGAAAAGGAAAAAC
GTGCCAAGAAAAAACAGGCAAAACAGAAGAAAAATAGTCGAAAAGGTAATAAGGGGAAAA
GTGGCAAGTCCAACATCAATAAGGAAATAATTATGGACCACAGTCATTCAGATGATAGAA
TATTGGATGATTTTTGTGGACAAATTGAAGAGATGCCCTTAAATGCTGACAACCCTGAAG
AAGTTTCTGATATATCTGACAGTAGAGACGATAATTCAGACATGCTTCATGTTGATATTG
AAGACCGTGAATCTAGCCCTGTTAATTGGGAGATAGATGCTTCAGAAACTCAAACTACTA
TTCCTGGAAGTAGTGAGGTGCAAAATGACCATGCAGGAAAGAGGACCTCTACTGTGGATG
ATAGCTCATCGTCTTGTTCATCTGACTCAGTGCCTTCAGTTACTGTGAATGGATCATATA
AAGGAGGTGCCTGGACAAGCGTCAGATCCTCATCCAATAGGGGAAACAACAGGAGGAATA
AGGATACTGAAGCACGGGCAGGATTTGCACAAGGTGGATCATGTTCATCGCATAATGGTT
TTATAGGCTCTGGCAGCAATGCCTCTGGCCACTCAAAGGAAAGACACGAACCTGAGGATG
ATAAAGTTGTCTTGCAGAGGAAGCAACATGCACAATGGAACATTGATATCATTAGCTCCT
CCAAGTCAAGAATGGCAGAGTCTTCATTTTCTTCTGTGAGCTCTATTAAGAAGCAACCTC
AACCAAATTTTTTGCTAGAAAGCACCAATAGTTTGAATCACCGTGGAAGCGAAGCTTCTG
GCACTGTGACTTCCACTACAACAGCGGGTGCCTCTTCAACCCCGGCCACTCAGTTAGTTT
TGAATAAAGGACCTGTATCCAGTGCTGCAACCCAGAATGAGAAGCCACTACCTCTGCAGG
TGCTTGTACCATCCAAATCTGAAGTGCAGAAGCAGGCTTCCCTAACTGGCAGTGCAACTA
CCGAGGCCGTTTCAGTATCAAGGCCCTTGACTGCCCCACAAGTCCCTGCAGCAAAACAAA
GTGCACCAGTCACTTCAACAGCTCAGAATGCACCTTTTCTTTCTCGTTCAATGAGTGCTG
TTGGGCGGTTGGGGAATGAACCATCTGCCAATGCTCCTAGTTTCGTTCCCCGTTCACGAA
CATATCGCAATGCCATGATGGAGAAAAGTTCTGGTGGTGGAAGCTGTTTCACACATCAGC
AAGGTTCATCGGAGCAAGCAGTTGCACCATGGCAATCGATGTTTACATCGCAACCTTTCA
TTCGGCCATCAGAGACCTTGTCTTGGAAAGAGGAAACATTATTGAGATCTGGGTTTACAT
TTGGAACTGTGAAGCCCGAGTCACTGAACCCATATCAGGGCAGAGAAGAGAACTCACAGC
AAGCGAGCAGCAACAGCAGTGATTGTGCGCCATCGAGTTCAAACATCAGAAGCGAGATCG
AGAAGCTGAATTTGAGCGGAAGACCACGAAGCAAGCAACTGTTGTCAGAAATTTCGACCA
GATTTACTCCCTATCAGCCACAAGGCTTGGTCGCTGATGAGTTCCCACACCTAGACATCA
TCAACGACTTGCTGGATGAGGAGCAGAGTGACAGAAGAAGGGTTCTTCAACCTGATTTTG
TTCAACAGTCCTATATGCCTCATGGTGCCAGCACACCTGATTATGGTGAGCCATACTTGT
TTGACCAGTCCGAGCAATACTTCGATGAGGAGCCTCCAAGGTTTTATAGTCCATTGAGCA
GTGCTCCTCGGAGGTTGAGGGACCTGAGCTATTCGCACTTTGATCTCCCATCACACTCCA
GCAGCAGCCAGTTTGATGATCTGATGATGAGTCAGTGGCCATACAGCCGCACTGACATCT
CCATGCCTAGTTTTGGGTCAGACACAAGTGGCTACCCCTATCAGGTGTGGGATCTCGCGA
ATGGATCAAGCAGGTACCCATCGTATCGCCCTGCCAATGGGCATTGAGAGTTTTAATGAT
TGCATTGACAATAATGTGTGGTTAAGTCCATGATGTTCGCTTCTGAGCTGAGTGTAATTG
TAATAGTTCCCCATAGCAGTGATATAAAGAATTGTTCCTCAGTTTCCTTGTTCAATCAAT
AGTTATATGACCCCCCTCCTCCCTCTTTTCTCTAGTTCAGTTTTGCCCAGTGGTAATAAA
TCTAAGTCGGCTAAAATGATCTGGCTAATCGTGTTGTGAAATGTGTATGATGCAAGCAAA
TGGTAGGGTGTTTTTAAGCCATGCCAGTGCTTCAGCTGATACTACATTAAACTGGGAGTA
TTCTTTGTTTCTCCCTCTGACGAGTGACGACGTGTTATTGATCGTCTCATGTTCTCTTTG
TATATTTCAGAGTAAATTCTGGATATAGCCCATGGACATAAACTAATTATTTGATG