Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d041392_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:3:115687793:115691499:1 gene:Zm00001d041392 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:calcineurin B-like2 description: calcineurin B-like2
Sequence

ATGGTGCAGTGCCTGGACGGGGTGAGGCAGCTGCTCGCGGTCCTGCTCAATTGCTGCGAC
GTCGAGCTCAAGCAGCCGCGGGGGCTCCAAGACCCCCAGGTCCTCGCGAGGGAGACCGTC
TTCAGCGTGAGTGAGGTCGAGGCGCTGTACGAGCTGTTTAAGAGGATCAGCAGCGCCGTC
ATTGATGATGGGCTGATTAACAAGGAGGAATTTCAGTTGGCGCTATTTAAGACCAACAAG
AAGGAGAGCCTGTTCGCGGATCGCGTATTTGATTTATTTGACACAAAGCACAGTGGAATT
TTGGGATTTGAAGAATTTGCTCGTGCTCTCTCAGTATTTCATCCTAATGCTCCCCTTGAT
GAGAAAATTGATTTTTCATTCCGGCTGTATGATCTCAAGCAGCAAGGCTATATTGAGAGA
CAAGAGGTTAAGCAGATGGTTGTTGCAACACTTGCCGAGTCAGGAATGAATCTTTCGGAT
GAAATTGTAGAGAGTATAATTGACAAGGTCTGTTAA

Peptide Sequence

PEP ID

Zm00001d041392_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:3:115687793:115691499:1 gene:Zm00001d041392 transcript:Zm00001d041392_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:calcineurin B-like2 description: calcineurin B-like2
Sequence

MVQCLDGVRQLLAVLLNCCDVELKQPRGLQDPQVLARETVFSVSEVEALYELFKRISSAV
IDDGLINKEEFQLALFKTNKKESLFADRVFDLFDTKHSGILGFEEFARALSVFHPNAPLD
EKIDFSFRLYDLKQQGYIERQEVKQMVVATLAESGMNLSDEIVESIIDKVC

Transcript Sequence

Transcript ID

Zm00001d041392_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:115687793:115691499:1 gene:Zm00001d041392 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:calcineurin B-like2 description: calcineurin B-like2
Sequence

CGGGAGGCCGGGAGAGAAGAGAACACGCGCGTCAGGAGCGCACACCGCACGGCAGCGCAG
GACACCGACGACGAAGCGAGGAGAGGGGAGGAGGCGGAGCCGAGCGCCCGAGCCCAACCC
CGCAACCACGACCCACTTCCCCGTCGCGATTCGCATTGCCCTTCCCTCGGGTTCTACCCC
CAGCCTCGCGCCGCCGCCGCCGCCGCCGCCCTTGCCAGAGAGATCACCCCCCATTCCCAC
AATCCCGTCCCTCCCTCCGTCCCTCGAGGAGCCGAGCCCTCCGCGCGGCCGTGGGATGGG
GCAGTGACCGGTGAGTGGCGTGGGGAGCCGGTGGGCGGTGGCGAGGGCATATCATGGTGC
AGTGCCTGGACGGGGTGAGGCAGCTGCTCGCGGTCCTGCTCAATTGCTGCGACGTCGAGC
TCAAGCAGCCGCGGGGGCTCCAAGACCCCCAGGTCCTCGCGAGGGAGACCGTCTTCAGCG
TGAGTGAGGTCGAGGCGCTGTACGAGCTGTTTAAGAGGATCAGCAGCGCCGTCATTGATG
ATGGGCTGATTAACAAGGAGGAATTTCAGTTGGCGCTATTTAAGACCAACAAGAAGGAGA
GCCTGTTCGCGGATCGCGTATTTGATTTATTTGACACAAAGCACAGTGGAATTTTGGGAT
TTGAAGAATTTGCTCGTGCTCTCTCAGTATTTCATCCTAATGCTCCCCTTGATGAGAAAA
TTGATTTTTCATTCCGGCTGTATGATCTCAAGCAGCAAGGCTATATTGAGAGACAAGAGG
TTAAGCAGATGGTTGTTGCAACACTTGCCGAGTCAGGAATGAATCTTTCGGATGAAATTG
TAGAGAGTATAATTGACAAGGTCTGTTAA