Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d041380_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:3:115123329:115124939:1 gene:Zm00001d041380 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative pentatricopeptide repeat-containing protein
Sequence	ATGGCGGCTCAGCGCCTGCTCTTCCTGAAATGTTGTCGCGGCTACTCCACCTCTGCTGAG GACATGGTCATCTCCTCCCTCCGCCTCATCCCCTCCCCTTCTGTTAGTGTTACCAACCCA CCTCCACTCCCTACTATTCTTCATTCTACTGACTCTCCTCCTGACCCCCATCCACCGCTT ACCACCATGCTCTTATCTGCCGCTGATCGTCTCCGCGGGGTCTTCCTCCGCAAGCCCTCT GGTCGCAACGTGCTTCACCAGGCGCTATCCTCCACAGGCATTGGCGCTACCATGGCACTG TCTCCAGAGGTGCTTGCGAATGTCGTCAATACCAGCAACCTGAGTGGTGCCGCCACTGTG ACCTACTTTGATTGGGCAGTCACTAACTCCAAGCCTCCCCCATCTGTCCACACCTGCAAC ATTGTCATCAGGGCATTGGGGAGGAAGAAATTTTTTGATTATCTTGATGACGCCCTTCAG ATCATGCGCAGAAACAACATCTTTCCAGACCTGACCACATTGGAGATCATCATGGATAGC CTAGTTGCTGCCAGGCATGTCAGTAGGGCTGTTGAGGTGATCAGTACCGATCAATTTGGA TTTGGGATTGGAAAAACCTGCCACAGAAAGGATGCATTTACCATCCTCATTAGGTGTCTT TGCCGGAGGTCACATGTTGGCCTTGCTAGCTCGCTCTTGCAGGCTGCTCGTAAGGAGTTG TTTGGTCTTGATAGCAATGTGTACAATGATGTCATGGGTGGCTGGGCGAGGTTTGGGAGT GTTGATAAACTGCAGGAGGTTTGGACAAAGATGCAGGAGGATGGGCTGGTTCCAAATGAG GTTTCACATTGCCATTTAATTGAGGGATTGGGTAGAGTCGGGCAGACTGAGGACGCACTC AAGGCGTTTGAGTATATGGTACATGAGAGATATGGTCCAACTACAATGGCCTACAATGTA CTTATTTTCAATTTTATCCACATTGGGGATTTGGACAGTTGCATCAAGTATTACAAGGAT ATGTTGGATAAGAATTGCTCCCCAAACATCGAAACGTACTCCAAGATGATTAAAGCCTTT TTGAGAGGTCGCAGGGTAGCTGATGCGCTCCAAATGTTTGATGACATGTTGATTCAAGGA GTTCTGCCAAATACTGGGATGATAACATCATTTATCAATCCACTGTGTACATTTGGACCG CCTCATGCTGCTTTGATGATCTACAAAAAGAGTAGGAAGGCTGGTTGTGTAATATCCTTG AAAGCTTATAAGCTTTTGCTGGAAAGACTCGCTAAATTTGGGAAGAGTGGAATCGTTTTG GACATTTGGGAAGAGATGCAGGAGTGTGGATATCAACCTGATAAAGAGATTTACGAATTT ATTGTAAATGGGCTTTGCAATGTGGGTAAGGTCGATGCTGCTGTGTCTGTGGTGGAGGAA TCACTTCGGAATGGCTTCTGTCTTGGGAGAGTTGTTTACAGCAAACTGAACAACAAGCTG TTGGAAATGGACAAAGTTGAGACCGCATATAATTTGTTCAAGAAAGTCAAACATGCACGT GCACTTACGAATTCACGCAATTATTGCCGTGCTAATGGTTGGCATTTTTGA

Peptide Sequence

PEP ID	Zm00001d041380_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:3:115123329:115124939:1 gene:Zm00001d041380 transcript:Zm00001d041380_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative pentatricopeptide repeat-containing protein
Sequence	MAAQRLLFLKCCRGYSTSAEDMVISSLRLIPSPSVSVTNPPPLPTILHSTDSPPDPHPPL TTMLLSAADRLRGVFLRKPSGRNVLHQALSSTGIGATMALSPEVLANVVNTSNLSGAATV TYFDWAVTNSKPPPSVHTCNIVIRALGRKKFFDYLDDALQIMRRNNIFPDLTTLEIIMDS LVAARHVSRAVEVISTDQFGFGIGKTCHRKDAFTILIRCLCRRSHVGLASSLLQAARKEL FGLDSNVYNDVMGGWARFGSVDKLQEVWTKMQEDGLVPNEVSHCHLIEGLGRVGQTEDAL KAFEYMVHERYGPTTMAYNVLIFNFIHIGDLDSCIKYYKDMLDKNCSPNIETYSKMIKAF LRGRRVADALQMFDDMLIQGVLPNTGMITSFINPLCTFGPPHAALMIYKKSRKAGCVISL KAYKLLLERLAKFGKSGIVLDIWEEMQECGYQPDKEIYEFIVNGLCNVGKVDAAVSVVEE SLRNGFCLGRVVYSKLNNKLLEMDKVETAYNLFKKVKHARALTNSRNYCRANGWHF

Transcript Sequence

Transcript ID	Zm00001d041380_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:115123329:115124939:1 gene:Zm00001d041380 gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative pentatricopeptide repeat-containing protein
Sequence	ATGGCGGCTCAGCGCCTGCTCTTCCTGAAATGTTGTCGCGGCTACTCCACCTCTGCTGAG GACATGGTCATCTCCTCCCTCCGCCTCATCCCCTCCCCTTCTGTTAGTGTTACCAACCCA CCTCCACTCCCTACTATTCTTCATTCTACTGACTCTCCTCCTGACCCCCATCCACCGCTT ACCACCATGCTCTTATCTGCCGCTGATCGTCTCCGCGGGGTCTTCCTCCGCAAGCCCTCT GGTCGCAACGTGCTTCACCAGGCGCTATCCTCCACAGGCATTGGCGCTACCATGGCACTG TCTCCAGAGGTGCTTGCGAATGTCGTCAATACCAGCAACCTGAGTGGTGCCGCCACTGTG ACCTACTTTGATTGGGCAGTCACTAACTCCAAGCCTCCCCCATCTGTCCACACCTGCAAC ATTGTCATCAGGGCATTGGGGAGGAAGAAATTTTTTGATTATCTTGATGACGCCCTTCAG ATCATGCGCAGAAACAACATCTTTCCAGACCTGACCACATTGGAGATCATCATGGATAGC CTAGTTGCTGCCAGGCATGTCAGTAGGGCTGTTGAGGTGATCAGTACCGATCAATTTGGA TTTGGGATTGGAAAAACCTGCCACAGAAAGGATGCATTTACCATCCTCATTAGGTGTCTT TGCCGGAGGTCACATGTTGGCCTTGCTAGCTCGCTCTTGCAGGCTGCTCGTAAGGAGTTG TTTGGTCTTGATAGCAATGTGTACAATGATGTCATGGGTGGCTGGGCGAGGTTTGGGAGT GTTGATAAACTGCAGGAGGTTTGGACAAAGATGCAGGAGGATGGGCTGGTTCCAAATGAG GTTTCACATTGCCATTTAATTGAGGGATTGGGTAGAGTCGGGCAGACTGAGGACGCACTC AAGGCGTTTGAGTATATGGTACATGAGAGATATGGTCCAACTACAATGGCCTACAATGTA CTTATTTTCAATTTTATCCACATTGGGGATTTGGACAGTTGCATCAAGTATTACAAGGAT ATGTTGGATAAGAATTGCTCCCCAAACATCGAAACGTACTCCAAGATGATTAAAGCCTTT TTGAGAGGTCGCAGGGTAGCTGATGCGCTCCAAATGTTTGATGACATGTTGATTCAAGGA GTTCTGCCAAATACTGGGATGATAACATCATTTATCAATCCACTGTGTACATTTGGACCG CCTCATGCTGCTTTGATGATCTACAAAAAGAGTAGGAAGGCTGGTTGTGTAATATCCTTG AAAGCTTATAAGCTTTTGCTGGAAAGACTCGCTAAATTTGGGAAGAGTGGAATCGTTTTG GACATTTGGGAAGAGATGCAGGAGTGTGGATATCAACCTGATAAAGAGATTTACGAATTT ATTGTAAATGGGCTTTGCAATGTGGGTAAGGTCGATGCTGCTGTGTCTGTGGTGGAGGAA TCACTTCGGAATGGCTTCTGTCTTGGGAGAGTTGTTTACAGCAAACTGAACAACAAGCTG TTGGAAATGGACAAAGTTGAGACCGCATATAATTTGTTCAAGAAAGTCAAACATGCACGT GCACTTACGAATTCACGCAATTATTGCCGTGCTAATGGTTGGCATTTTTGA