Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d041378_T008
CDS Infomation	cds chromosome:B73_RefGen_v4:3:114791881:114800996:-1 gene:Zm00001d041378 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histone acetyltransferase HAC2
Sequence	ATGATGACTCAAACCCTGCAAGGGAAAGTTATGGCCTACACACCGAGCAGTTTTCCTGTT CAGCAACAGATTCTGCCGGAGGATCTTGAAATGCTTCAGCTGGATAACATGGACCAGGGT ACCTCTCCGGTTCGTGCTGTCATCATTAAAAGAATTGAAACATGCCTGAGAAATAGAGAA GAATTTTGTAACTTGTGCCCAGATTCATTACTGAAAGCTTCAGAAATCATTGACAACCTG CTATACAAAATTGATCCGCAGCCCCAATACATGGATCTTGACACAATAGAAGCCAGGGTG AATGATTTGCTGAGATCGTTCCTGTATGGAAACCAAAGAGACCCATGGATATCTTCAGCA GTTCCATCAACAAAAGATTTGAGGCAGCTGCCTGGGATACAAATGACAGACTCTAGTGTA TATCATAATAGAGTTGTCCCTGGTTTTACTAATTTGCCTGCACGCCCAGGAGGCATACCT TCACATGCTGTGTTCACTGCTCAGAGATATGTACCACTGAATCACAACATGACTGCTGCC AGTTTTGCTCTAGTTGAAAGGCCTGAAAGCTTTATGAGTACCGTAGTTGCTCCATCTGTG TCAGGACTTCCTAACTGTATTTCTGGCCCTGGTGGGATTGATAGTTCTGGATTGCAAAAT GGCTATTCAAAGGACCATTTTCCAGGTGATGCTTATCATGTTGATAGTCCACAACTGTCT ATGTCCGGGAGTCCCAGTCCTTTATCAGCCTTATGTGATCCAATCACAAGTTCGGGTGCA ATGATAAGATCATCAATGGATTTTATCCCTAAAGCAAGTGGGCAAAAACTCTTTACTGGC AAAGGACAAATGTTTCAACAATACAGAGAATATGAGAAAGAGTTAGATGGTGCATGGAGC CACCCCACAGAGAAGCCAGTTCACTCAAATAGGACAACTCAGAGCGATGAAATATATCTC AAAGGAGAATGCGGACCTGATACACTCACAGAAATGAAGGAAAACTATGGGCGCATCTCA GACTCTAGAGATCCTTGTGACCCTGAGAGAGAAATTGTTGAGAGATCTGAACAGACATCA AATATCACAGTATCAAAGGCAACTTCACCAATTTCAGATGAATCTTCTGGCAGGCGTCCA GCAAAACGCCTGAAGGCTGATGCTCCCCGTCTTGTCAATGTCAATCAAGTAGAGAGTCCA CAGGAGCAAAAACCTGTTGTGAATGAGAATCATGTATCTGGTGGTGAAACAGTACAATCG GAAATCACAGAATTACCTGCAAAACCACCTTGCAGTTCATTGGGAGACATTAATGCTGAG AGCAATAATATGCTTGAACAGGGTAGTGAAGATGTACCCAACATGGATATTGTTAAGGAA GAGGAATTGTCCCGTGCAAAAGGTGACATTGAGATGAAAGATGCTAAGACTGTTGCATTG GATCATACACCAAAAGGGGTCAATTTAAGTTCAAGACGAAAGAGAGGGGCTTCTATACTT TATGGATTAACTGCTGAGGAGCTTAGAGATCACATGAGTAGTCTAATAAACCGGCATACT TGTCAGAGCAAGGTGACATCTCAAGAATTCCCATCAATTGATGGATTGCCTGATCAGAAC ACATGCAGTTTGTGTGGGATGGAGAAGCTTCTTTTTGAACCTCCTCCACGATTTTGTGCG CTCTGTTTCAAAATAATAAATTCTGCAGGGTGCTATTATGTTGAAGTTGAAAATGGAACT GAGAAATCTTCTATATGTAGCAAATGCCACCATCTTAGCAGTTTAAGAGCTAAATATCAG AAGAAATTTAATTATGCAGAAACAGATGCTGAGGCTGAATGGTGGGTCCAGTGCGACAAG TGCAAAGCTTGGCAACATGAAATCTGTGCTCTTTTTAACAGAAAGTGTGAAGGGGCAAAG GCTGAGTATACTTGTGCAAAATGTTTTTTGAAGGAAAAGGATAGTGGAGATATTCAGGCA CTGGAGTCATCCACTGTTCTTGGGGCACAGGAGTTACAAAGAACCAAGCTAAGTGATCAT ATTGAGCAAAGACTTTCAGAGAGGCTTGAGCAGGACAGGCAACAGAGGGCGAGCGCCTCT GGAAAAGTTGCTGAAGAGGTACCAGGTGTGAAAGGGCTTACAGTTAGAGTAGTTTCTTCA GCCGAAAGATTACTGCAAGTCCAACCACGTTTTCGTGGTTTTTTTAAACAAGGAAAGTAT CCTGGGGAATTTCCATACAAATCGAAGGCCATTCTCTTGTTTCAAAAGATCGAAGGTGTG GATGTTTGCCTCTTTGCCATGTATGTACAAGAGTATGGCTCAGATTGCCCACCACCAAAT CAAAGACATGTTTATCTTGCATATATTGATTCTGTCAAATACTTCCGGCCTGAAATCAAA TCTGCAACTGGAGAAGCTCTCCGCACCTTTGTGTATCATGAAATTTTGATTGGTTATCTG GACTACTGCAAGAAACGAGGGTTTGTAAGCTGTTCAATATGGGCTTGCCCATCTACGAAG CGAGATGATTATGTTTTATATTGCCATCCAACAGTACAAAAGATGCCCAAGTCTGACAAG CTTCGAAGCTGGTACCAGAACCTGATCAAGAAGGCCATTAAGGAGGGTGTTGTTGTGGAG CGTAATACACTCTCTGACTTCTTCCTTCAGCCTACAAATGAGTGCAAGGCCAATATTTCG GCAGCATGCTTGCCATATTGTGAGAACGATTTCTGGCCTGGAGAAGCAGAGAGGCTGCTT GAGAAGAAAGATGATAATGCTTCACAGAAGGAAGAGACACAGGTAGGAAGGCTCTTGCGT GTTGCCAAACGCGACGACAGAAAAGGAAACCTTGATGATATTTTGCTTGTGCATAAGCTT GGGGAAAGGATGCGCACAATGAAAGAAGACTTCATTATGCTTTGTCTGCAACAGTTTTGC AAGCACTGCCACCATCCTATCCTATCTGGCAAAAGTTGGGTTTGCACTAGCTGTAAAAAT TTCCATCTATGTGACAAGTGTCATGCAGAGGAGCAGAATACAGCACAGAAGGACAGGCAT CCGGCCACCACAAAACAGAAGCATGCATTCGAAAGAATGGAGGTACAACCTCTTCCAGAG ACTGATGATGGAGATCCGACAATGGAAAGTAAGTATTTTGACAGCAGGATCGATTTCTTG AAGCACTGCCAAGACAATCAATTCCAGTTTGATACCATCCGGCGGGCAAAGCACTCTACA ATGATGATTCTGTATTACCTACACAATTCAACCTGCTCTGCTTGCCATCGTGCCGTGGAC CAATGCTTGGTGTGGCGGTGCCTAGAGTGCCTAGGCTGCACCTTTTGTGGTCAATGCTAT AAACAAAATGGTCAAGGCTTGCATATTCATGAATTAAGGCAGATTGACACTAGAGAAACT TCACAGAAGCACACTCTACAGGTCTCATGTGGATCGCACCATCATTCTTCGAAACAAAAC TTTGCTCAAATGATTTTTATTTAA

Peptide Sequence

PEP ID	Zm00001d041378_P008
PEP Infomation	pep chromosome:B73_RefGen_v4:3:114791881:114800996:-1 gene:Zm00001d041378 transcript:Zm00001d041378_T008 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histone acetyltransferase HAC2
Sequence	MMTQTLQGKVMAYTPSSFPVQQQILPEDLEMLQLDNMDQGTSPVRAVIIKRIETCLRNRE EFCNLCPDSLLKASEIIDNLLYKIDPQPQYMDLDTIEARVNDLLRSFLYGNQRDPWISSA VPSTKDLRQLPGIQMTDSSVYHNRVVPGFTNLPARPGGIPSHAVFTAQRYVPLNHNMTAA SFALVERPESFMSTVVAPSVSGLPNCISGPGGIDSSGLQNGYSKDHFPGDAYHVDSPQLS MSGSPSPLSALCDPITSSGAMIRSSMDFIPKASGQKLFTGKGQMFQQYREYEKELDGAWS HPTEKPVHSNRTTQSDEIYLKGECGPDTLTEMKENYGRISDSRDPCDPEREIVERSEQTS NITVSKATSPISDESSGRRPAKRLKADAPRLVNVNQVESPQEQKPVVNENHVSGGETVQS EITELPAKPPCSSLGDINAESNNMLEQGSEDVPNMDIVKEEELSRAKGDIEMKDAKTVAL DHTPKGVNLSSRRKRGASILYGLTAEELRDHMSSLINRHTCQSKVTSQEFPSIDGLPDQN TCSLCGMEKLLFEPPPRFCALCFKIINSAGCYYVEVENGTEKSSICSKCHHLSSLRAKYQ KKFNYAETDAEAEWWVQCDKCKAWQHEICALFNRKCEGAKAEYTCAKCFLKEKDSGDIQA LESSTVLGAQELQRTKLSDHIEQRLSERLEQDRQQRASASGKVAEEVPGVKGLTVRVVSS AERLLQVQPRFRGFFKQGKYPGEFPYKSKAILLFQKIEGVDVCLFAMYVQEYGSDCPPPN QRHVYLAYIDSVKYFRPEIKSATGEALRTFVYHEILIGYLDYCKKRGFVSCSIWACPSTK RDDYVLYCHPTVQKMPKSDKLRSWYQNLIKKAIKEGVVVERNTLSDFFLQPTNECKANIS AACLPYCENDFWPGEAERLLEKKDDNASQKEETQVGRLLRVAKRDDRKGNLDDILLVHKL GERMRTMKEDFIMLCLQQFCKHCHHPILSGKSWVCTSCKNFHLCDKCHAEEQNTAQKDRH PATTKQKHAFERMEVQPLPETDDGDPTMESKYFDSRIDFLKHCQDNQFQFDTIRRAKHST MMILYYLHNSTCSACHRAVDQCLVWRCLECLGCTFCGQCYKQNGQGLHIHELRQIDTRET SQKHTLQVSCGSHHHSSKQNFAQMIFI

Transcript Sequence

Transcript ID	Zm00001d041378_T008
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:114791881:114800996:-1 gene:Zm00001d041378 gene_biotype:protein_coding transcript_biotype:protein_coding description:Histone acetyltransferase HAC2
Sequence	CCTTCTGATCGCCTCCTTCCCGTTCCCCGCAGCCGCCCAAACCCTAGCCCTAGCCCCTAG CCCCGCTGCCGGCAAGGCCGGAGCGCCCGGAGCCCCCGCTGGCCGGCCCCGGAGAAGACG TCCCATGCGGCTGTATCGCGCAGGGGAAATTTAGGTGAATGTTACAAGCATGATGACTCA AACCCTGCAAGGGAAAGTTATGGCCTACACACCGAGCAGTTTTCCTGTTCAGCAACAGAT TCTGCCGGAGGATCTTGAAATGCTTCAGCTGGATAACATGGACCAGGGTACCTCTCCGGT TCGTGCTGTCATCATTAAAAGAATTGAAACATGCCTGAGAAATAGAGAAGAATTTTGTAA CTTGTGCCCAGATTCATTACTGAAAGCTTCAGAAATCATTGACAACCTGCTATACAAAAT TGATCCGCAGCCCCAATACATGGATCTTGACACAATAGAAGCCAGGGTGAATGATTTGCT GAGATCGTTCCTGTATGGAAACCAAAGAGACCCATGGATATCTTCAGCAGTTCCATCAAC AAAAGATTTGAGGCAGCTGCCTGGGATACAAATGACAGACTCTAGTGTATATCATAATAG AGTTGTCCCTGGTTTTACTAATTTGCCTGCACGCCCAGGAGGCATACCTTCACATGCTGT GTTCACTGCTCAGAGATATGTACCACTGAATCACAACATGACTGCTGCCAGTTTTGCTCT AGTTGAAAGGCCTGAAAGCTTTATGAGTACCGTAGTTGCTCCATCTGTGTCAGGACTTCC TAACTGTATTTCTGGCCCTGGTGGGATTGATAGTTCTGGATTGCAAAATGGCTATTCAAA GGACCATTTTCCAGGTGATGCTTATCATGTTGATAGTCCACAACTGTCTATGTCCGGGAG TCCCAGTCCTTTATCAGCCTTATGTGATCCAATCACAAGTTCGGGTGCAATGATAAGATC ATCAATGGATTTTATCCCTAAAGCAAGTGGGCAAAAACTCTTTACTGGCAAAGGACAAAT GTTTCAACAATACAGAGAATATGAGAAAGAGTTAGATGGTGCATGGAGCCACCCCACAGA GAAGCCAGTTCACTCAAATAGGACAACTCAGAGCGATGAAATATATCTCAAAGGAGAATG CGGACCTGATACACTCACAGAAATGAAGGAAAACTATGGGCGCATCTCAGACTCTAGAGA TCCTTGTGACCCTGAGAGAGAAATTGTTGAGAGATCTGAACAGACATCAAATATCACAGT ATCAAAGGCAACTTCACCAATTTCAGATGAATCTTCTGGCAGGCGTCCAGCAAAACGCCT GAAGGCTGATGCTCCCCGTCTTGTCAATGTCAATCAAGTAGAGAGTCCACAGGAGCAAAA ACCTGTTGTGAATGAGAATCATGTATCTGGTGGTGAAACAGTACAATCGGAAATCACAGA ATTACCTGCAAAACCACCTTGCAGTTCATTGGGAGACATTAATGCTGAGAGCAATAATAT GCTTGAACAGGGTAGTGAAGATGTACCCAACATGGATATTGTTAAGGAAGAGGAATTGTC CCGTGCAAAAGGTGACATTGAGATGAAAGATGCTAAGACTGTTGCATTGGATCATACACC AAAAGGGGTCAATTTAAGTTCAAGACGAAAGAGAGGGGCTTCTATACTTTATGGATTAAC TGCTGAGGAGCTTAGAGATCACATGAGTAGTCTAATAAACCGGCATACTTGTCAGAGCAA GGTGACATCTCAAGAATTCCCATCAATTGATGGATTGCCTGATCAGAACACATGCAGTTT GTGTGGGATGGAGAAGCTTCTTTTTGAACCTCCTCCACGATTTTGTGCGCTCTGTTTCAA AATAATAAATTCTGCAGGGTGCTATTATGTTGAAGTTGAAAATGGAACTGAGAAATCTTC TATATGTAGCAAATGCCACCATCTTAGCAGTTTAAGAGCTAAATATCAGAAGAAATTTAA TTATGCAGAAACAGATGCTGAGGCTGAATGGTGGGTCCAGTGCGACAAGTGCAAAGCTTG GCAACATGAAATCTGTGCTCTTTTTAACAGAAAGTGTGAAGGGGCAAAGGCTGAGTATAC TTGTGCAAAATGTTTTTTGAAGGAAAAGGATAGTGGAGATATTCAGGCACTGGAGTCATC CACTGTTCTTGGGGCACAGGAGTTACAAAGAACCAAGCTAAGTGATCATATTGAGCAAAG ACTTTCAGAGAGGCTTGAGCAGGACAGGCAACAGAGGGCGAGCGCCTCTGGAAAAGTTGC TGAAGAGGTACCAGGTGTGAAAGGGCTTACAGTTAGAGTAGTTTCTTCAGCCGAAAGATT ACTGCAAGTCCAACCACGTTTTCGTGGTTTTTTTAAACAAGGAAAGTATCCTGGGGAATT TCCATACAAATCGAAGGCCATTCTCTTGTTTCAAAAGATCGAAGGTGTGGATGTTTGCCT CTTTGCCATGTATGTACAAGAGTATGGCTCAGATTGCCCACCACCAAATCAAAGACATGT TTATCTTGCATATATTGATTCTGTCAAATACTTCCGGCCTGAAATCAAATCTGCAACTGG AGAAGCTCTCCGCACCTTTGTGTATCATGAAATTTTGATTGGTTATCTGGACTACTGCAA GAAACGAGGGTTTGTAAGCTGTTCAATATGGGCTTGCCCATCTACGAAGCGAGATGATTA TGTTTTATATTGCCATCCAACAGTACAAAAGATGCCCAAGTCTGACAAGCTTCGAAGCTG GTACCAGAACCTGATCAAGAAGGCCATTAAGGAGGGTGTTGTTGTGGAGCGTAATACACT CTCTGACTTCTTCCTTCAGCCTACAAATGAGTGCAAGGCCAATATTTCGGCAGCATGCTT GCCATATTGTGAGAACGATTTCTGGCCTGGAGAAGCAGAGAGGCTGCTTGAGAAGAAAGA TGATAATGCTTCACAGAAGGAAGAGACACAGGTAGGAAGGCTCTTGCGTGTTGCCAAACG CGACGACAGAAAAGGAAACCTTGATGATATTTTGCTTGTGCATAAGCTTGGGGAAAGGAT GCGCACAATGAAAGAAGACTTCATTATGCTTTGTCTGCAACAGTTTTGCAAGCACTGCCA CCATCCTATCCTATCTGGCAAAAGTTGGGTTTGCACTAGCTGTAAAAATTTCCATCTATG TGACAAGTGTCATGCAGAGGAGCAGAATACAGCACAGAAGGACAGGCATCCGGCCACCAC AAAACAGAAGCATGCATTCGAAAGAATGGAGGTACAACCTCTTCCAGAGACTGATGATGG AGATCCGACAATGGAAAGTAAGTATTTTGACAGCAGGATCGATTTCTTGAAGCACTGCCA AGACAATCAATTCCAGTTTGATACCATCCGGCGGGCAAAGCACTCTACAATGATGATTCT GTATTACCTACACAATTCAACCTGCTCTGCTTGCCATCGTGCCGTGGACCAATGCTTGGT GTGGCGGTGCCTAGAGTGCCTAGGCTGCACCTTTTGTGGTCAATGCTATAAACAAAATGG TCAAGGCTTGCATATTCATGAATTAAGGCAGATTGACACTAGAGAAACTTCACAGAAGCA CACTCTACAGGTCTCATGTGGATCGCACCATCATTCTTCGAAACAAAACTTTGCTCAAAT GATTTTTATTTAAGAAGTTCTATGAGAAAATTGCAGTTGCATATTCTATAGTGTGTGGGT GTTCATCTTTCTGTGAATTGCTTATGTTCACAAAAACTGGATCTGGTTCCATTTCCATAG CACTTGGCTTCTATACATGATAGCTCTGT