Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d041309_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:3:111440781:111443015:-1 gene:Zm00001d041309 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable cyclic nucleotide-gated ion channel 5
Sequence	ATGTTCGGGTGCGGCTACCGGACCCAGTTCATCAACGGGCGCAGGGAGAAGTTCGTGAGG CTCGTCGAGGCAGACGCGCCGGCGGATTCGGCGTCCAGCCCCACTTCCGGCAGCGGCGGC GGTGCCAGCATGGAGCACGGGCACGGGCACGGGCACGGCGGCGGGTTCCACATGGACAGC TACTTCTCGGGCAACCCGGCGGCGGCCGCCGCCAAGTTCCGTGCGCGGTCGGTTCGGGTG GCGGCGGGCGTGATGAACCGGTCGGAGCGGCTGAGGAGCATCGGCCTCGTGTTCCAGGAG GACTTCCGGAAGATGTCGCAGCAGGTGTTCGACCCGCAGGACGCGTTCCTGGCGCGCATG AACCGCGCCTTCGTCTTCGCGTGCATCGTGTCCGTGGCCATCGACCCGCTCTTCCTCTAC CTCCTGGCCGTCAAGTACACGGACAAGAACACCTGCATCGGCTTCGACCGCAACCTGGCC ACCGTCGCCACCGTGGTGCGCACCGCCGTGGACGCCTTCTACCTGGCGCGGATCGCGCTG CAGTTCCGGACGGCGTACATCGCGCCGTCGTCGCGCGTGTTCGGGCGCGGCGAGCTGGTC ATCGACTCGTCCGCCATCGCGCGCCGCTACCTGCGCCGATTCTTCGCCGTCGACCTGCTG TCCGTGCTGCCGCTGCCGCAGGTCTCCATCTGGAACTTCCTCAACCGGCCCAAGGGCGCG GACCTGCTGCCCACCAAGAACGCGCTGCTCTTCACGGTGCTGTCGCAGTACGTGCCCCGC CTGGTGCGCTTCTACCCCATCACCTCGGAGCTGAAGCGCACCACGGGGGTGTTCGCCGAG ACGGCCTTCGGCGGCGCCGCCTTCTACCTGCTGCTCTACATGCTGGCCAGCCACATGGTG GGGGCCTTCTGGTACCTGCTGGCCATCGAGCGGCTGGACGACTGCTGGCGGGACAAGTGC ACCAACCTCAACTTCCACCAGTGCCGCACCTACATGTACTGCGGCGGCGGCAGCCAGGGC CAGTCGGGCTTCCTCGAGTGGCGCACCATGATCCGGCAGGTGCTGGCGCAGGAGTGCGCC CCCGTCGACGGCAGCGGCACGGGGTTCCCCTACGGCATCTACACCACGGCCATCCAGTCG GGCGTCTACTCCACGGAGAACCTGACGGCCAAGATCCTCTTCTGCCTCTGGTGGGGCCTG CAGAACCTGAGCACCATCGGCCAGGGCCTGGAGACGACCCACTACAAGGGGGAGCAGCTC TTCTCCATCACGCTCGCGCTGCTGGGCCTCATCCTCATGGCGCTCCTCATCGGCAACATG CAGACGTACCTGCAGTCCATGACGCTGCGCCTGGAGGAGATGCGCCTCAAGCGCAGGGAC TCGGAGCAGTGGATGCACCACCGCGTCCTCCCCGACGAGCTCCGGGAGCGGGTGTGGCGG CACAACCAGTACAAGTGGCTCGAGACGCGCGGCGTCGACGAGGACAGCCTCGTGCGCAGC CTGCCCAAGGACCTGCGCCGCGACGTCAAGCGGCACCTCTGCCTCCGCCTCGTCCGCCGC GTCCCGCTCTTCGCCAACATGGACGAGCGCCTCCTCGACGCTATCTGCGAGCGCCTCAAG CCCAGCCTCTGCACCGAGTCCACCTACATCGTGCGCGAGGGGGACCCCGTCGACGAGATG CTCTTCATCATTCGCGGCCGCCTCGAGAGCTCCACCACCGACGGCGGCCGGATGGGGTTC TACAACCGGGGGCTGCTCAAGGAGGGCGACTTCTGCGGGGAGGAGCTACTCACGTGGGCG CTCGACCCAAAGGCCGGCGCCAACTTCCCGCTGTCCACGCGCACCGTTAGGGCCATCTCC GAGGTGGAGGCGTTCGCGCTGCGCGCTGACGAGCTCAAGTTCGTGGCGGGGCAGTTCCGG CGCCTGCACAGCAAGCAGCTGCAGCAGACCTTCCGCTTCTACTCGCAGCAGTGGCGCACC TGGGCCTCCTGCTTCATACAGGCCGCATGGAGGAGGTACCTCAAGCGGAAGGCGGCCGAG CAGCGGCGCCGGGAGGAGGAGATGGAGGCCGACTCGTCCGGGGTTTCCACGAGCAGGTTC AAGACCACGCTCCTCGTGTCGCGCTTCGCCAAGAACGCCATGCGCGGCGTGCAGCGCCAG CGATCCGTCCGGGCCGACAGCCTCATCATGCTTCCCAGGCCGCCGGAGCCGGATTTCGGC TCCATGGACTACTGA

Peptide Sequence

PEP ID	Zm00001d041309_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:3:111440781:111443015:-1 gene:Zm00001d041309 transcript:Zm00001d041309_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable cyclic nucleotide-gated ion channel 5
Sequence	MFGCGYRTQFINGRREKFVRLVEADAPADSASSPTSGSGGGASMEHGHGHGHGGGFHMDS YFSGNPAAAAAKFRARSVRVAAGVMNRSERLRSIGLVFQEDFRKMSQQVFDPQDAFLARM NRAFVFACIVSVAIDPLFLYLLAVKYTDKNTCIGFDRNLATVATVVRTAVDAFYLARIAL QFRTAYIAPSSRVFGRGELVIDSSAIARRYLRRFFAVDLLSVLPLPQVSIWNFLNRPKGA DLLPTKNALLFTVLSQYVPRLVRFYPITSELKRTTGVFAETAFGGAAFYLLLYMLASHMV GAFWYLLAIERLDDCWRDKCTNLNFHQCRTYMYCGGGSQGQSGFLEWRTMIRQVLAQECA PVDGSGTGFPYGIYTTAIQSGVYSTENLTAKILFCLWWGLQNLSTIGQGLETTHYKGEQL FSITLALLGLILMALLIGNMQTYLQSMTLRLEEMRLKRRDSEQWMHHRVLPDELRERVWR HNQYKWLETRGVDEDSLVRSLPKDLRRDVKRHLCLRLVRRVPLFANMDERLLDAICERLK PSLCTESTYIVREGDPVDEMLFIIRGRLESSTTDGGRMGFYNRGLLKEGDFCGEELLTWA LDPKAGANFPLSTRTVRAISEVEAFALRADELKFVAGQFRRLHSKQLQQTFRFYSQQWRT WASCFIQAAWRRYLKRKAAEQRRREEEMEADSSGVSTSRFKTTLLVSRFAKNAMRGVQRQ RSVRADSLIMLPRPPEPDFGSMDY

Transcript Sequence

Transcript ID	Zm00001d041309_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:111440781:111443015:-1 gene:Zm00001d041309 gene_biotype:protein_coding transcript_biotype:protein_coding description:Probable cyclic nucleotide-gated ion channel 5
Sequence	ATGTTCGGGTGCGGCTACCGGACCCAGTTCATCAACGGGCGCAGGGAGAAGTTCGTGAGG CTCGTCGAGGCAGACGCGCCGGCGGATTCGGCGTCCAGCCCCACTTCCGGCAGCGGCGGC GGTGCCAGCATGGAGCACGGGCACGGGCACGGGCACGGCGGCGGGTTCCACATGGACAGC TACTTCTCGGGCAACCCGGCGGCGGCCGCCGCCAAGTTCCGTGCGCGGTCGGTTCGGGTG GCGGCGGGCGTGATGAACCGGTCGGAGCGGCTGAGGAGCATCGGCCTCGTGTTCCAGGAG GACTTCCGGAAGATGTCGCAGCAGGTGTTCGACCCGCAGGACGCGTTCCTGGCGCGCATG AACCGCGCCTTCGTCTTCGCGTGCATCGTGTCCGTGGCCATCGACCCGCTCTTCCTCTAC CTCCTGGCCGTCAAGTACACGGACAAGAACACCTGCATCGGCTTCGACCGCAACCTGGCC ACCGTCGCCACCGTGGTGCGCACCGCCGTGGACGCCTTCTACCTGGCGCGGATCGCGCTG CAGTTCCGGACGGCGTACATCGCGCCGTCGTCGCGCGTGTTCGGGCGCGGCGAGCTGGTC ATCGACTCGTCCGCCATCGCGCGCCGCTACCTGCGCCGATTCTTCGCCGTCGACCTGCTG TCCGTGCTGCCGCTGCCGCAGGTCTCCATCTGGAACTTCCTCAACCGGCCCAAGGGCGCG GACCTGCTGCCCACCAAGAACGCGCTGCTCTTCACGGTGCTGTCGCAGTACGTGCCCCGC CTGGTGCGCTTCTACCCCATCACCTCGGAGCTGAAGCGCACCACGGGGGTGTTCGCCGAG ACGGCCTTCGGCGGCGCCGCCTTCTACCTGCTGCTCTACATGCTGGCCAGCCACATGGTG GGGGCCTTCTGGTACCTGCTGGCCATCGAGCGGCTGGACGACTGCTGGCGGGACAAGTGC ACCAACCTCAACTTCCACCAGTGCCGCACCTACATGTACTGCGGCGGCGGCAGCCAGGGC CAGTCGGGCTTCCTCGAGTGGCGCACCATGATCCGGCAGGTGCTGGCGCAGGAGTGCGCC CCCGTCGACGGCAGCGGCACGGGGTTCCCCTACGGCATCTACACCACGGCCATCCAGTCG GGCGTCTACTCCACGGAGAACCTGACGGCCAAGATCCTCTTCTGCCTCTGGTGGGGCCTG CAGAACCTGAGCACCATCGGCCAGGGCCTGGAGACGACCCACTACAAGGGGGAGCAGCTC TTCTCCATCACGCTCGCGCTGCTGGGCCTCATCCTCATGGCGCTCCTCATCGGCAACATG CAGACGTACCTGCAGTCCATGACGCTGCGCCTGGAGGAGATGCGCCTCAAGCGCAGGGAC TCGGAGCAGTGGATGCACCACCGCGTCCTCCCCGACGAGCTCCGGGAGCGGGTGTGGCGG CACAACCAGTACAAGTGGCTCGAGACGCGCGGCGTCGACGAGGACAGCCTCGTGCGCAGC CTGCCCAAGGACCTGCGCCGCGACGTCAAGCGGCACCTCTGCCTCCGCCTCGTCCGCCGC GTCCCGCTCTTCGCCAACATGGACGAGCGCCTCCTCGACGCTATCTGCGAGCGCCTCAAG CCCAGCCTCTGCACCGAGTCCACCTACATCGTGCGCGAGGGGGACCCCGTCGACGAGATG CTCTTCATCATTCGCGGCCGCCTCGAGAGCTCCACCACCGACGGCGGCCGGATGGGGTTC TACAACCGGGGGCTGCTCAAGGAGGGCGACTTCTGCGGGGAGGAGCTACTCACGTGGGCG CTCGACCCAAAGGCCGGCGCCAACTTCCCGCTGTCCACGCGCACCGTTAGGGCCATCTCC GAGGTGGAGGCGTTCGCGCTGCGCGCTGACGAGCTCAAGTTCGTGGCGGGGCAGTTCCGG CGCCTGCACAGCAAGCAGCTGCAGCAGACCTTCCGCTTCTACTCGCAGCAGTGGCGCACC TGGGCCTCCTGCTTCATACAGGCCGCATGGAGGAGGTACCTCAAGCGGAAGGCGGCCGAG CAGCGGCGCCGGGAGGAGGAGATGGAGGCCGACTCGTCCGGGGTTTCCACGAGCAGGTTC AAGACCACGCTCCTCGTGTCGCGCTTCGCCAAGAACGCCATGCGCGGCGTGCAGCGCCAG CGATCCGTCCGGGCCGACAGCCTCATCATGCTTCCCAGGCCGCCGGAGCCGGATTTCGGC TCCATGGACTACTGA