Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d041287_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:3:110465002:110469594:1 gene:Zm00001d041287 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGTGGCGCGGATGATGCGGTGGCCTCGGCCGCCGCCGGCGCGGAATATCCGCGTCCGC
CTGGTGGTGCGGCGGGCGGAGGGCCTGCCCCCGCCTCCTGCGCCCCTCTCGCCTGACGGG
TCCCCCGGCCCCGAGGCCGAGGCGAAGGCGTTTGTGGAGGTGAGCTGGAAGGGCCCGAAG
ATGTCGCCGCTCTCCTCGCTGCGGCGCGCGCAGCGGCCTCCCAGGAACCAGACGCGGAAG
GAGGCGCTGCCGGCCGTCGCCGCGGCCGCTCTCGAGGATGGCGCCGCCGCCGCCCCTGCT
CTAGCGGTGTCGGCGGTGGCCTGGGACGAGGAGTTCGAGAGGGATGCGGCGCTCACGGCG
ACGTCGCACCGTGAGCCCGCTGCGTTCCACCCCTGGGACGTCACCTTCTCCGTTGTCAGC
GAATCAAATAAAATATCAAAGAGCAAACTTGTTTTGGGGACCGCTTCACTGAACCTAGCA
GATTATGCATCTGCTGCTGAAGAGGAAATCGAGATAATCCTACCATTGTCTGTGCCTAGT
AGTGCAACAGACCTGGTCCCATCACTCCATCTTACTTTAAGCCTGGCGGAAGTAAGAACA
TCTCAACAATCACCTGGCGCTTCACAACGTTCTGTTATTGCCCCATTGTCACCTTCCTCT
GGTGACTCTCTTGCTTCTGGAAAAGATGAGGTTTCTGTCATTAAGGTGGGTCTGAGAAAT
CTGAAAATGCTAAGAGATCTAGTGTCTACACGGAGGTTCAAAAAGACTAACCAAGACTTT
GACGGCAGTGAGAAGTATTATGTCCACAGCGATGGTGCAGAATTTTCTTGTGATACTGAC
TCTCTTGACGATGATCTGGATGATAGAGAGCATGACGATGAGTTTGGGGGTTCAGCCGTT
AGGAAGTCCTTCAGCTACGGCTCACTGCAGACTATGAATGTTGGTGCCCTACTTTATGCG
CCTAGGATTGATGGAGACGATGAGGGTTGGGTACATTACAGTCACCGCAACTCTGATGTT
GGTTATCATGTTGAGCAAGTGCCACCCCCCACAGCTGAGGAGCATGCTTCCATCCCTTTG
CGGCGGAAGAGGAGCATACTTCCAGCTCGGTGGAGAAAGGTAAAATTACCAAAGGCTAAA
GGGGAGCCTCTGTTGAAGCCGTATGGAGAGGAGGGTGGTGATGATATTGACTACGATCGG
CGGCTGTTGACCCCTTCTGATGGATCTGTTTCAGAGGGATCAAATGGTTCTAACAGTATG
GTGTCGGTATTTGGTGATGACGATTTTGTTGTGGGGAACTGGGAGTCGAAGGAAGTATTT
AGCCGAGATGGCCACTTGAAGCTTTCTACACAGGTGTTCTTTGCATCGATAGACCAGAGA
AGCGAACGGGCTGCAGGGGAGAGTGCATGCACAGCACTTGTGGCTGTTGTTGCAGACTGG
TTCCAAACAAACCAGGACCTGATGCCAATCAGGTCACAGTTTGACAACCTGATCCGAGAA
GGATCTCTGGAATGGAGGAGACTCTGTGAGAACGAGACCTACAGAGAGCGCTTTCCTGAT
AAGCACTTTGATCTTGAAACTGTCCTTCATGCAAAGATCCGTCCACTCACAGTTGCTCAC
AGTAAGTCATTCATTGGGTTTTTCCATCCTCAAGGCACTGAGGATGTAACTGGATTCGAC
TTCCTCGACGGTGCAATGTCATTCGATAACATCTGGGACGAGATAAGCCGAGCAGCGGAG
TGCTCCTCCGGAAAGCCTGCCCTCTACATTGTCAGTTGGAACGACCACTTCTTTGTCCTC
AAGGTTGACGCCAATGCTATTTACATCATTGACACGCTCGGTGAGAGGCTGTCTGAAGGC
TGCAACCAGGCATACATCTTGAAGTTTGATGACACCACCACCATCCACAAAACACCTGCT
GAAAAGAAGGAACCAAGTCCTGATCACCGTGGACGCCGCAAGGATTCCTCAGAGACCTGC
TCAACCGAGCAGGGCAGCGGATCGGACACTGAAGAGTGCGAGCCTGTGTTGAAGGGCAAG
GATGCATGCAAGGAGTACATCAAGAGCTTCTTGGCCGCCATCCCGATCCGGGAGCTGCAG
GCTGACATCAAGAAAGGTCTCATGGCATCAACGCCCCTGCACCACCGCCTCCAGATCGAG
TTCCACTACACGGAACCCCGCCCCGCCGAGATCGCGGCGCCTTCTCCACTGCCCCCATTC
GAAGCCCCCTTCGAGTTCTGCTGGCCCGAGCCACCGTCACCGCCAGCTGCCACTGAATCC
ACCGTGACCCATCCACCTGCCATGGAGGCCGGCATAACCCAGGCTGTCGCCGTTGTATAG

Peptide Sequence

PEP ID

Zm00001d041287_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:3:110465002:110469594:1 gene:Zm00001d041287 transcript:Zm00001d041287_T001 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MVARMMRWPRPPPARNIRVRLVVRRAEGLPPPPAPLSPDGSPGPEAEAKAFVEVSWKGPK
MSPLSSLRRAQRPPRNQTRKEALPAVAAAALEDGAAAAPALAVSAVAWDEEFERDAALTA
TSHREPAAFHPWDVTFSVVSESNKISKSKLVLGTASLNLADYASAAEEEIEIILPLSVPS
SATDLVPSLHLTLSLAEVRTSQQSPGASQRSVIAPLSPSSGDSLASGKDEVSVIKVGLRN
LKMLRDLVSTRRFKKTNQDFDGSEKYYVHSDGAEFSCDTDSLDDDLDDREHDDEFGGSAV
RKSFSYGSLQTMNVGALLYAPRIDGDDEGWVHYSHRNSDVGYHVEQVPPPTAEEHASIPL
RRKRSILPARWRKVKLPKAKGEPLLKPYGEEGGDDIDYDRRLLTPSDGSVSEGSNGSNSM
VSVFGDDDFVVGNWESKEVFSRDGHLKLSTQVFFASIDQRSERAAGESACTALVAVVADW
FQTNQDLMPIRSQFDNLIREGSLEWRRLCENETYRERFPDKHFDLETVLHAKIRPLTVAH
SKSFIGFFHPQGTEDVTGFDFLDGAMSFDNIWDEISRAAECSSGKPALYIVSWNDHFFVL
KVDANAIYIIDTLGERLSEGCNQAYILKFDDTTTIHKTPAEKKEPSPDHRGRRKDSSETC
STEQGSGSDTEECEPVLKGKDACKEYIKSFLAAIPIRELQADIKKGLMASTPLHHRLQIE
FHYTEPRPAEIAAPSPLPPFEAPFEFCWPEPPSPPAATESTVTHPPAMEAGITQAVAVV

Transcript Sequence

Transcript ID

Zm00001d041287_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:110465002:110469594:1 gene:Zm00001d041287 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GTCGCTCGTTCCGTTCCGCGCGTGCATTTTTCTCCTCGTATATTCCCGTCCCAATCTCCA
ACTGCTTCCTCAAATCCCGCCCCGCCCCGCCCCGACATAAATCCGGGCCCCTAATCCCGA
TCCCGCCGCCAAAATCCAATCCTGCGCCGTCCTCTCCTCTCAATTCGTGTGTCGCTGGGC
CGGTTCGGGCGCGGGGATCGAGTCTCCCGTGGTGCTCTTGCAGCCGAGCTGGGATTCTCG
GGGGCAATTGGGTTGGAGTTTGGATTTCCGCTCGGAGGTTGGTGGTGGTGTGGTCGCCGG
GAGCCTTTGACTTTTTTTTTTGCCGGAGTACGGAGGAGCAGGGGGCCTGTTTGACCTCCG
GTGCGGTGATGGTGGCGCGGATGATGCGGTGGCCTCGGCCGCCGCCGGCGCGGAATATCC
GCGTCCGCCTGGTGGTGCGGCGGGCGGAGGGCCTGCCCCCGCCTCCTGCGCCCCTCTCGC
CTGACGGGTCCCCCGGCCCCGAGGCCGAGGCGAAGGCGTTTGTGGAGGTGAGCTGGAAGG
GCCCGAAGATGTCGCCGCTCTCCTCGCTGCGGCGCGCGCAGCGGCCTCCCAGGAACCAGA
CGCGGAAGGAGGCGCTGCCGGCCGTCGCCGCGGCCGCTCTCGAGGATGGCGCCGCCGCCG
CCCCTGCTCTAGCGGTGTCGGCGGTGGCCTGGGACGAGGAGTTCGAGAGGGATGCGGCGC
TCACGGCGACGTCGCACCGTGAGCCCGCTGCGTTCCACCCCTGGGACGTCACCTTCTCCG
TTGTCAGCGAATCAAATAAAATATCAAAGAGCAAACTTGTTTTGGGGACCGCTTCACTGA
ACCTAGCAGATTATGCATCTGCTGCTGAAGAGGAAATCGAGATAATCCTACCATTGTCTG
TGCCTAGTAGTGCAACAGACCTGGTCCCATCACTCCATCTTACTTTAAGCCTGGCGGAAG
TAAGAACATCTCAACAATCACCTGGCGCTTCACAACGTTCTGTTATTGCCCCATTGTCAC
CTTCCTCTGGTGACTCTCTTGCTTCTGGAAAAGATGAGGTTTCTGTCATTAAGGTGGGTC
TGAGAAATCTGAAAATGCTAAGAGATCTAGTGTCTACACGGAGGTTCAAAAAGACTAACC
AAGACTTTGACGGCAGTGAGAAGTATTATGTCCACAGCGATGGTGCAGAATTTTCTTGTG
ATACTGACTCTCTTGACGATGATCTGGATGATAGAGAGCATGACGATGAGTTTGGGGGTT
CAGCCGTTAGGAAGTCCTTCAGCTACGGCTCACTGCAGACTATGAATGTTGGTGCCCTAC
TTTATGCGCCTAGGATTGATGGAGACGATGAGGGTTGGGTACATTACAGTCACCGCAACT
CTGATGTTGGTTATCATGTTGAGCAAGTGCCACCCCCCACAGCTGAGGAGCATGCTTCCA
TCCCTTTGCGGCGGAAGAGGAGCATACTTCCAGCTCGGTGGAGAAAGGTAAAATTACCAA
AGGCTAAAGGGGAGCCTCTGTTGAAGCCGTATGGAGAGGAGGGTGGTGATGATATTGACT
ACGATCGGCGGCTGTTGACCCCTTCTGATGGATCTGTTTCAGAGGGATCAAATGGTTCTA
ACAGTATGGTGTCGGTATTTGGTGATGACGATTTTGTTGTGGGGAACTGGGAGTCGAAGG
AAGTATTTAGCCGAGATGGCCACTTGAAGCTTTCTACACAGGTGTTCTTTGCATCGATAG
ACCAGAGAAGCGAACGGGCTGCAGGGGAGAGTGCATGCACAGCACTTGTGGCTGTTGTTG
CAGACTGGTTCCAAACAAACCAGGACCTGATGCCAATCAGGTCACAGTTTGACAACCTGA
TCCGAGAAGGATCTCTGGAATGGAGGAGACTCTGTGAGAACGAGACCTACAGAGAGCGCT
TTCCTGATAAGCACTTTGATCTTGAAACTGTCCTTCATGCAAAGATCCGTCCACTCACAG
TTGCTCACAGTAAGTCATTCATTGGGTTTTTCCATCCTCAAGGCACTGAGGATGTAACTG
GATTCGACTTCCTCGACGGTGCAATGTCATTCGATAACATCTGGGACGAGATAAGCCGAG
CAGCGGAGTGCTCCTCCGGAAAGCCTGCCCTCTACATTGTCAGTTGGAACGACCACTTCT
TTGTCCTCAAGGTTGACGCCAATGCTATTTACATCATTGACACGCTCGGTGAGAGGCTGT
CTGAAGGCTGCAACCAGGCATACATCTTGAAGTTTGATGACACCACCACCATCCACAAAA
CACCTGCTGAAAAGAAGGAACCAAGTCCTGATCACCGTGGACGCCGCAAGGATTCCTCAG
AGACCTGCTCAACCGAGCAGGGCAGCGGATCGGACACTGAAGAGTGCGAGCCTGTGTTGA
AGGGCAAGGATGCATGCAAGGAGTACATCAAGAGCTTCTTGGCCGCCATCCCGATCCGGG
AGCTGCAGGCTGACATCAAGAAAGGTCTCATGGCATCAACGCCCCTGCACCACCGCCTCC
AGATCGAGTTCCACTACACGGAACCCCGCCCCGCCGAGATCGCGGCGCCTTCTCCACTGC
CCCCATTCGAAGCCCCCTTCGAGTTCTGCTGGCCCGAGCCACCGTCACCGCCAGCTGCCA
CTGAATCCACCGTGACCCATCCACCTGCCATGGAGGCCGGCATAACCCAGGCTGTCGCCG
TTGTATAGCCGGTCCTGGCTGCTGCTGCGGCCTAGCCTAGGGCAACGGTTGCTTAGTTTA
ACATATAGAGGGCGGCGCTTCTTTTAGCGAGCGAATTGTGAGGTCGAGACCAGATCGAAG
ATTTGGCTGGCTTCGGCCCTGGTCTGCTCCTTTTGCTGTCTAATTAAGATGAACTGACTA
GTATAGCTTGACTGTCTTTTGGTCTCAGCTTTCATCATCTTGTAAAGAAAGAAAGGATGA
TTGCTCCTGCACATCTTTACCTGTGAAGCGAGTTCGCTGGAATTGTAATCCTTTGCTACA
TTATCTTTATGTGAATCATGACCTCGTCTTTTTTG