Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d041280_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:3:110162431:110171208:-1 gene:Zm00001d041280 gene_biotype:protein_coding transcript_biotype:protein_coding description:ubiquitin-specific protease 8
Sequence	ATGCCCGCGCCCCCGGACCCGCCGCCGCTCCCGCCGCTGGACCCGTCGGATCCCGCCGCG GCCACACCGCCCGCCGCCGCGGCCGCCGATGAGGAGGAGGACGACCGCGTCTTCCTTGTG CCACTCAGGTGGTGGAAGGAGGCGCAGCAAGGGCTGGCGATCAACGTGCCTGGTCTGCCC TACGCGGCCGCGCCTGCTGGACCTACCTCCTACGGCATGAGGGTGCTCAGCATGTTCCTC TCCGACCAAACATACACCCTCCGCCGCGCCGACGAGCTCTTGCAGCAGACCGCCTCCTTC GCCGCCAGGAGCTACGCGCTCCTCCCGGCCGACCTGTTCTCAAAGGCACGGGAATGGTAT ATTGTGCCTGCCAAGTCTGCAGTCAAAAACGTGTCACCAGCTGGAGAGGGCTCAGTAAAT ATTTACCCCATAATGCTAAGAGTTTCAGCCAGCAGAGATACATATACACTAACCGTGAAG ATCGGCAAAAAGGACAACTCAACTGAGAACTTTAAGAGAGCATGCAAGATCCTGACTGCA GACTCTGAGCCGGTTCACATATGGGATTTCTCTGGGCGAACAACATACATAGTTATGACT GAACTGAACCGGTCGCCCCATGACTCAAAATCTGCAGATCAGGAGATGCCTCTACAAATA CACATTTATGATCTGTCGGAACCTATGGTTAATGGTTCTGATGGGAAAAGGGATGAGTTA GCATTAACATTGGGTGGCTCAAGTTCTAGCAATGGTGGTAGTATGAACATGGATCTGGAT TCATCAAGTGGAAGCTCTAAGCAAGTTGGATCCGGTTTAACAGGATTAGACAATTTGGGA AACACATGTTTCATGAACAGTGCAGTCCAGTGCTTGGCTCATACTTCAAAGCTGGTTGAC TATTTCCTTGGTGATTTCCACAAAGAAGTAAACCCACATAACCCACTGGGGATGAAGGGG GAACTTGCATATGCATTTGGCGACTTGTTGAGAAAGCTATGGGCTATTGATAGGACCCCT GTTGCACCTCGCCAATTCAAGGCCAGACTTGGACGGTTTGCTCCCCAATTCAGTGGCTTT AACCAACATGATTCACAGGAGCTTCTTGCTTTCCTATTGGATGGACTCCATGAAGACTTG AACCGTGTTAAATGTAAACCATATTCTGAAGCTAAGGATTCAGATGGCCGTCCGGATGAA GAGGTTGCAGATGAGTATTGGGGCAACCATTTAGCTCGAAATGACTCTATCATAGTTGAT ATCTGCCAGGGTCAGTACAAGTCAACATTAGTTTGCCCCATCTGCAAGAAAGTTTCTGTA ACATTTGACCCGTTTATGTATTTGTCTTTGCCCCTGCCTTCAACAACAATGAGAACAATG ACCATAACAGTCTTCAGTACTGATGGGACCAGTGGGCCATCTCCTTACACTATTAGTGTA CCAAAATCGGGAGATACGAGGACCCTTATTAATGCGTTAAGCAGTGCTTGTTCGTTGAGA GATGATGAGCGCCTTCTAGTTGCTGAGGTCTACAACAATTCCCTTATTCGGTACTTGGAT GAACCTTCTGAAGTTATCTCCTTAATCAGAGATGGAGATCGTTTGGTTGCATATCGGCTT CCTAAAGACAATGAAGATGCCCCAATTGTGGTGTTCAGAAACCAGCGTATGGAGTCATCC CTTTCCAGTTTTGGGCGTAAGTCATGGAAGACTTTTGGCACTCCACTGGTGTCAAGCCTT CCTGATACAGTAACTGGAAGTAATATTTACAATCTTTTCCTAAAGGTTATGACTCCATTC AGAGTATCAAGAGGTGATGCTGCTGTTGCTGATCAAACACTTGGTGAAAGCAGTCTGGTT GATGAAACTGAAGATATCAATATGAGCTCTGATGCCTCAGAGCACACCAGCATAAACAAC AATTCTGTCGAGGATGAAACAGGGACTGAAGATGTGATGCAATTTTTCCTGACTAATGAG AGAATCCCAGACCAACGCATGAAGATAGAAATGGATCTATCCATTACGGTGAATGATCCG CATAAGCGTCTGCATGTGGCTGTGTGTTGGGAGGACAGTGGACTGGACCAATACAACTTT AGTTCTTTGAATTCTCTTCCAGAAGTTTACAAAGCGGTGCTGTTTTCTAGGAGGCCACAG GACACATGTTCTCTATATGCATGTCTGGAAGCTTTTATTAAGGAAGAACCATTAGGCCCA GAAGACATGTGGTACTGCCCAGGTTGTAAAGAGCATCGGCAAGCTAGTAAGAAGTTAGAC CTCTGGAGATTACCTGAAATCCTTATTATACACCTGAAAAGATTTTCATACAGTCGGTAT ACCAAAAACAAGCTGGAGACATTTGTGGACTTCCCGATTCATGATCTTGACCTGTCGAAG TATATTGGTCACAGATGCCAAGACGTTCCTCACAATTATCGACTGTATGCTACTAGCAAC CACTATGGAAGCTTGGGAGGTGGTCACTATACGGCTTATGTTTATCATGAAGGGAAAAAG GGTTGGTATGATTTCGATGACCGTCATGTGGGCCCCATAACCGAGGACAGTATAAAGACA TCGGCAGCTTATGTTCTTTTTTACCGGCGGATACAGGAGGATAGCTTAGATACAGTTACA GACATAGATTCTGATATTCCAACCTGA

Peptide Sequence

PEP ID	Zm00001d041280_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:3:110162431:110171208:-1 gene:Zm00001d041280 transcript:Zm00001d041280_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:ubiquitin-specific protease 8
Sequence	MPAPPDPPPLPPLDPSDPAAATPPAAAAADEEEDDRVFLVPLRWWKEAQQGLAINVPGLP YAAAPAGPTSYGMRVLSMFLSDQTYTLRRADELLQQTASFAARSYALLPADLFSKAREWY IVPAKSAVKNVSPAGEGSVNIYPIMLRVSASRDTYTLTVKIGKKDNSTENFKRACKILTA DSEPVHIWDFSGRTTYIVMTELNRSPHDSKSADQEMPLQIHIYDLSEPMVNGSDGKRDEL ALTLGGSSSSNGGSMNMDLDSSSGSSKQVGSGLTGLDNLGNTCFMNSAVQCLAHTSKLVD YFLGDFHKEVNPHNPLGMKGELAYAFGDLLRKLWAIDRTPVAPRQFKARLGRFAPQFSGF NQHDSQELLAFLLDGLHEDLNRVKCKPYSEAKDSDGRPDEEVADEYWGNHLARNDSIIVD ICQGQYKSTLVCPICKKVSVTFDPFMYLSLPLPSTTMRTMTITVFSTDGTSGPSPYTISV PKSGDTRTLINALSSACSLRDDERLLVAEVYNNSLIRYLDEPSEVISLIRDGDRLVAYRL PKDNEDAPIVVFRNQRMESSLSSFGRKSWKTFGTPLVSSLPDTVTGSNIYNLFLKVMTPF RVSRGDAAVADQTLGESSLVDETEDINMSSDASEHTSINNNSVEDETGTEDVMQFFLTNE RIPDQRMKIEMDLSITVNDPHKRLHVAVCWEDSGLDQYNFSSLNSLPEVYKAVLFSRRPQ DTCSLYACLEAFIKEEPLGPEDMWYCPGCKEHRQASKKLDLWRLPEILIIHLKRFSYSRY TKNKLETFVDFPIHDLDLSKYIGHRCQDVPHNYRLYATSNHYGSLGGGHYTAYVYHEGKK GWYDFDDRHVGPITEDSIKTSAAYVLFYRRIQEDSLDTVTDIDSDIPT

Transcript Sequence

Transcript ID	Zm00001d041280_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:110162431:110171208:-1 gene:Zm00001d041280 gene_biotype:protein_coding transcript_biotype:protein_coding description:ubiquitin-specific protease 8
Sequence	ATGCCCGCGCCCCCGGACCCGCCGCCGCTCCCGCCGCTGGACCCGTCGGATCCCGCCGCG GCCACACCGCCCGCCGCCGCGGCCGCCGATGAGGAGGAGGACGACCGCGTCTTCCTTGTG CCACTCAGGTGGTGGAAGGAGGCGCAGCAAGGGCTGGCGATCAACGTGCCTGGTCTGCCC TACGCGGCCGCGCCTGCTGGACCTACCTCCTACGGCATGAGGGTGCTCAGCATGTTCCTC TCCGACCAAACATACACCCTCCGCCGCGCCGACGAGCTCTTGCAGCAGACCGCCTCCTTC GCCGCCAGGAGCTACGCGCTCCTCCCGGCCGACCTGTTCTCAAAGGCACGGGAATGGTAT ATTGTGCCTGCCAAGTCTGCAGTCAAAAACGTGTCACCAGCTGGAGAGGGCTCAGTAAAT ATTTACCCCATAATGCTAAGAGTTTCAGCCAGCAGAGATACATATACACTAACCGTGAAG ATCGGCAAAAAGGACAACTCAACTGAGAACTTTAAGAGAGCATGCAAGATCCTGACTGCA GACTCTGAGCCGGTTCACATATGGGATTTCTCTGGGCGAACAACATACATAGTTATGACT GAACTGAACCGGTCGCCCCATGACTCAAAATCTGCAGATCAGGAGATGCCTCTACAAATA CACATTTATGATCTGTCGGAACCTATGGTTAATGGTTCTGATGGGAAAAGGGATGAGTTA GCATTAACATTGGGTGGCTCAAGTTCTAGCAATGGTGGTAGTATGAACATGGATCTGGAT TCATCAAGTGGAAGCTCTAAGCAAGTTGGATCCGGTTTAACAGGATTAGACAATTTGGGA AACACATGTTTCATGAACAGTGCAGTCCAGTGCTTGGCTCATACTTCAAAGCTGGTTGAC TATTTCCTTGGTGATTTCCACAAAGAAGTAAACCCACATAACCCACTGGGGATGAAGGGG GAACTTGCATATGCATTTGGCGACTTGTTGAGAAAGCTATGGGCTATTGATAGGACCCCT GTTGCACCTCGCCAATTCAAGGCCAGACTTGGACGGTTTGCTCCCCAATTCAGTGGCTTT AACCAACATGATTCACAGGAGCTTCTTGCTTTCCTATTGGATGGACTCCATGAAGACTTG AACCGTGTTAAATGTAAACCATATTCTGAAGCTAAGGATTCAGATGGCCGTCCGGATGAA GAGGTTGCAGATGAGTATTGGGGCAACCATTTAGCTCGAAATGACTCTATCATAGTTGAT ATCTGCCAGGGTCAGTACAAGTCAACATTAGTTTGCCCCATCTGCAAGAAAGTTTCTGTA ACATTTGACCCGTTTATGTATTTGTCTTTGCCCCTGCCTTCAACAACAATGAGAACAATG ACCATAACAGTCTTCAGTACTGATGGGACCAGTGGGCCATCTCCTTACACTATTAGTGTA CCAAAATCGGGAGATACGAGGACCCTTATTAATGCGTTAAGCAGTGCTTGTTCGTTGAGA GATGATGAGCGCCTTCTAGTTGCTGAGGTCTACAACAATTCCCTTATTCGGTACTTGGAT GAACCTTCTGAAGTTATCTCCTTAATCAGAGATGGAGATCGTTTGGTTGCATATCGGCTT CCTAAAGACAATGAAGATGCCCCAATTGTGGTGTTCAGAAACCAGCGTATGGAGTCATCC CTTTCCAGTTTTGGGCGTAAGTCATGGAAGACTTTTGGCACTCCACTGGTGTCAAGCCTT CCTGATACAGTAACTGGAAGTAATATTTACAATCTTTTCCTAAAGGTTATGACTCCATTC AGAGTATCAAGAGGTGATGCTGCTGTTGCTGATCAAACACTTGGTGAAAGCAGTCTGGTT GATGAAACTGAAGATATCAATATGAGCTCTGATGCCTCAGAGCACACCAGCATAAACAAC AATTCTGTCGAGGATGAAACAGGGACTGAAGATGTGATGCAATTTTTCCTGACTAATGAG AGAATCCCAGACCAACGCATGAAGATAGAAATGGATCTATCCATTACGGTGAATGATCCG CATAAGCGTCTGCATGTGGCTGTGTGTTGGGAGGACAGTGGACTGGACCAATACAACTTT AGTTCTTTGAATTCTCTTCCAGAAGTTTACAAAGCGGTGCTGTTTTCTAGGAGGCCACAG GACACATGTTCTCTATATGCATGTCTGGAAGCTTTTATTAAGGAAGAACCATTAGGCCCA GAAGACATGTGGTACTGCCCAGGTTGTAAAGAGCATCGGCAAGCTAGTAAGAAGTTAGAC CTCTGGAGATTACCTGAAATCCTTATTATACACCTGAAAAGATTTTCATACAGTCGGTAT ACCAAAAACAAGCTGGAGACATTTGTGGACTTCCCGATTCATGATCTTGACCTGTCGAAG TATATTGGTCACAGATGCCAAGACGTTCCTCACAATTATCGACTGTATGCTACTAGCAAC CACTATGGAAGCTTGGGAGGTGGTCACTATACGGCTTATGTTTATCATGAAGGGAAAAAG GGTTGGTATGATTTCGATGACCGTCATGTGGGCCCCATAACCGAGGACAGTATAAAGACA TCGGCAGCTTATGTTCTTTTTTACCGGCGGATACAGGAGGATAGCTTAGATACAGTTACA GACATAGATTCTGATATTCCAACCTGAGGAGGCGGTGGAGGCAATTTTTGAGCCCAAGTC CCGGACAGTGTATAGTTTCATTGGTTTAGGGGGACAGTTGTGCGGCAATGCCGCAACGGA AGTGAGAAATAGAACAGGTGGGGAAGAGTTTGTGCGGCAATGTGGTTCAGAGGGGGGAGA TAATTTGTCGCGGTTCCTTCCGTTGCAAATTCCTTTGTTTTTTTTCCGTTCCCTTTTAGC ACCTGTAACTGATAGCGGTAAAATTTTGGCTAATGGCATGTGGGGAAGATATTTCGTCCC AGATTCTCAACACAGTTAGGGTTAGTTTTGGAACCCTATTTTTAAGGAATTTCTATTTTT CTAAGAGAAACTAGTTTATTTTTTCTT