Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d041266_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:3:109152384:109154435:1 gene:Zm00001d041266 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGGCCTCGTCCTCCCGCACGGCCGACGTCGCCGCCAGCAGGGTGCTGTCCGAGAAGGGG GCGGCCGCAATGGCGGAGTGCGTCGGCCTGCTTTTCGGGAAGTGGACGGCGCTGCAGCTG GCGGTGCAGAACCAGTGGGGCGGCCACGACTCGCAGGCTAAGGCCGACCGGCTCGCCTCC TCCGTCCTCTCCTGGTTCACCCGCGCCGCCGCCGCCAGAGAAACCGCGGAGGCTGCACCG CGAACGCCGCGAACCGCCCCCGCAAACCTCCTCGAGCAACCCTCCGCGCTCGCACAATCC CCGTGTTTGTTTAATCTGTACATGGATGACGACGACGTGTCTCCCGACACCCGCGACGTC TACGTCGCCAACGCCACCGTATCCTCCTACTTCGCCGCCTCCGATGTCGCCTCCGTCGAC CGTCTCTTCGCGGAGGTCTCCACCGACGTCGTCGCCTGGACCACCATGGTCGCCGGCCAC GCCAGTTCCGGCGGCCTAGGCCGGGCAAGGCACTTCTTCGACGCCATGCCCGAGAGGAAC ATCGTATCCTGGAACGCGATGCTGCGCGCGTATGCCCGCGCCGGGATGCTCACCGAGGCG CGGGACCTGTTCGACGCAATGCCTACCAGGAACGCCGCCACCTGGAGCTGCATGATCAGT GGCCTCGTGCTGTCGGGACGCTGCTGGGAGGCGCTGCGTGATCAGGGGCTCTTCGGTGAC ATGGTCCGCAGCAGCGGCATCGTGCCGAATGAGCCCGCGCTGGTGAGCGTGGTCTCGGCG TGCGCCCAGCTGCGGTCACTGGAACACGGCGCGTGGGTGCACGCGTACGACGAACAGGAG CTGCAGGGGGCGATGAGTGTTGTCCTCGCCTCCGCTATCGTCGACATGTACATGAAATGT GGGGGGCCCTGTCGCTCTGGTCGTGTCATGGAGGCCTTGTATTTCGTCAAGAGCATGCCC GTGGAGCCACACCCTGGCTTATGGGGCGCACTAGCTAGCGCCTGCAAGATGCATGGCAAG GTTGAGCTTGGTGAGGAGGTTGCCAAGAAGCTCATTGAACTGGAGCCTCGCTATGGCAGC CGATACATCCTGCTGTCAAACTTGTATGGCTCTGTGAATAGATGGGATGACATGGCCTCT GTGCGTAAGATCCTCAAAAGGAGCAAGGTGCCCAAAGGCACTGGCAATGCAGTGGTTGGG ATGACATCGACATCCTGTATGTCGAATGGTTGA

Peptide Sequence

PEP ID	Zm00001d041266_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:3:109152384:109154435:1 gene:Zm00001d041266 transcript:Zm00001d041266_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	MASSSRTADVAASRVLSEKGAAAMAECVGLLFGKWTALQLAVQNQWGGHDSQAKADRLAS SVLSWFTRAAAARETAEAAPRTPRTAPANLLEQPSALAQSPCLFNLYMDDDDVSPDTRDV YVANATVSSYFAASDVASVDRLFAEVSTDVVAWTTMVAGHASSGGLGRARHFFDAMPERN IVSWNAMLRAYARAGMLTEARDLFDAMPTRNAATWSCMISGLVLSGRCWEALRDQGLFGD MVRSSGIVPNEPALVSVVSACAQLRSLEHGAWVHAYDEQELQGAMSVVLASAIVDMYMKC GGPCRSGRVMEALYFVKSMPVEPHPGLWGALASACKMHGKVELGEEVAKKLIELEPRYGS RYILLSNLYGSVNRWDDMASVRKILKRSKVPKGTGNAVVGMTSTSCMSNG

Transcript Sequence

Transcript ID	Zm00001d041266_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:109152384:109154435:1 gene:Zm00001d041266 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein
Sequence	ATGCATCGTCGATCGGCGGACCGGCCAGGCGGCCACCCCATCGATCCATCGCGAGGCCAA ACCCAGCCATGGCCTCGTCCTCCCGCACGGCCGACGTCGCCGCCAGCAGGGTGCTGTCCG AGAAGGGGGCGGCCGCAATGGCGGAGTGCGTCGGCCTGCTTTTCGGGAAGTGGACGGCGC TGCAGCTGGCGGTGCAGAACCAGTGGGGCGGCCACGACTCGCAGGCTAAGGCCGACCGGC TCGCCTCCTCCGTCCTCTCCTGGTTCACCCGCGCCGCCGCCGCCAGAGAAACCGCGGAGG CTGCACCGCGAACGCCGCGAACCGCCCCCGCAAACCTCCTCGAGCAACCCTCCGCGCTCG CACAATCCCCGTGTTTGTTTAATCTGTACATGGATGACGACGACGTGTCTCCCGACACCC GCGACGTCTACGTCGCCAACGCCACCGTATCCTCCTACTTCGCCGCCTCCGATGTCGCCT CCGTCGACCGTCTCTTCGCGGAGGTCTCCACCGACGTCGTCGCCTGGACCACCATGGTCG CCGGCCACGCCAGTTCCGGCGGCCTAGGCCGGGCAAGGCACTTCTTCGACGCCATGCCCG AGAGGAACATCGTATCCTGGAACGCGATGCTGCGCGCGTATGCCCGCGCCGGGATGCTCA CCGAGGCGCGGGACCTGTTCGACGCAATGCCTACCAGGAACGCCGCCACCTGGAGCTGCA TGATCAGTGGCCTCGTGCTGTCGGGACGCTGCTGGGAGGCGCTGCGTGATCAGGGGCTCT TCGGTGACATGGTCCGCAGCAGCGGCATCGTGCCGAATGAGCCCGCGCTGGTGAGCGTGG TCTCGGCGTGCGCCCAGCTGCGGTCACTGGAACACGGCGCGTGGGTGCACGCGTACGACG AACAGGAGCTGCAGGGGGCGATGAGTGTTGTCCTCGCCTCCGCTATCGTCGACATGTACA TGAAATGTGGGGGGCCCTGTCGCTCTGGTCGTGTCATGGAGGCCTTGTATTTCGTCAAGA GCATGCCCGTGGAGCCACACCCTGGCTTATGGGGCGCACTAGCTAGCGCCTGCAAGATGC ATGGCAAGGTTGAGCTTGGTGAGGAGGTTGCCAAGAAGCTCATTGAACTGGAGCCTCGCT ATGGCAGCCGATACATCCTGCTGTCAAACTTGTATGGCTCTGTGAATAGATGGGATGACA TGGCCTCTGTGCGTAAGATCCTCAAAAGGAGCAAGGTGCCCAAAGGCACTGGCAATGCAG TGGTTGGGATGACATCGACATCCTGTATGTCGAATGGTTGA