Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d041229_T005
CDS Infomation	cds chromosome:B73_RefGen_v4:3:106710015:106715943:1 gene:Zm00001d041229 gene_biotype:protein_coding transcript_biotype:protein_coding description:CSC1-like protein RXW8
Sequence	ATGACTGGCGCAAAGAAGGCATATAAGAAGTTCAAACATTTCACAGATGAAACTGTCGAT CAAGGTTGCAGGACAGTTACCTACCGCTGTTGTCTGTGTGGAGCTTCTTCAAATTCTTTC AAGTTGTTGAACACTGAGTGTGAGCAGAACAAGGGGAAAGCGGACAATAAATCCATCTTG GACTTAGACGATGAGGAATGCACAACTGCTTTTGTATTTTTCAAAACTCGGTATGCAGCA CTTATTGCGTCAGAAATACTTCAAACATCTAACCCTATGAAATGGGTTGCTAATCTTGCT CCAGAACCAGAAGACGTGTATTGGTCCAATCTTTGGCTACCCTATAAGCAACTTTGGGCT CGCCGTATTGCTACACTCCTAGGCTCTATCTTTTTCATGTTCATATTTCTGATACCGGTG ACATTTATACAAGGACTATCTCAGCTAGAGCAGTTGCAGCAGAGGCTTCCTTTCCTAAGA GGAATATTGAAGAAGAAATACTACATGACTCAGCTAGTAACTGGGTACCTTCCCAGTGTC ATACTGCAAATCTTCCTGTACATTGTTGCTCCAATTATGATGCTGTTTTCTACATTGGAG GGCCCTACATCTCACAGTGAAAGGAAGAGAAGTGCTTGCTGTAAAGTGCTGTACTTTACA GTTTGGAACATATTCTTTGCTAATGTATTATCTGGTACTGTCATTAGTCAATTGAATGTG TTATCAAGCCCAAAGGACATACCTGTCCAGCTTGCTAAAGCTGTACCTGGACAGGCCACT TTCTTCATCACCTATGTCCTGACCTCAGGATGGGCTAGTTTGTCATCTGAAGTTATGCAA CTCTTTGGTCTGATATGGAACTTTATAATCAAATACGTTCTGAGAATGAGAGAAGATACA GAATTCGTTCCCTCGTTTCCTTACCACACAGAAGTACCAAAAGTTCTGTTGTTTGGACTA TTGGGCTTCACATTTTCTGTGCTGGCTCCTCTGATCTTACCTTTTCTGCTGGTGTACTTT TGTCTTGGTTATGTTGTATACCGCAATCAGTTGCTCAATGTGTATCGAACAAGGTATGAC ACAGGTGGTTTGTATTGGCCAATTGCATACAACACAGTCATATTCTCACTTGTGCTCACC CAGATCATCTGCCTTGGTGTATTTGGCCTTAAAGAATCGCCGGTAGCTGCAGGCTTCACT GTACCTCTTATCATCCTTACTCTTTTGTTTAACCAGTACTGCAGAAACCGGCTTCTTCCA TTATTCAAGACTTTTCCAGCACAGGATTTAATCGACATGGACAGGGAAGATGAACGATCA GGAAGAATGGATGAAATTCACCACGGACTTCATTCTGCTTATTGCCAGTTCGCTGACACT GTAGATGTGCCCTTGGATAAAATTGAAATCGTTGGTGGGGATGAGGAGCAAGGCTCTAGC TCGGGTCAGTCCAGTGTTAAAGAAACGTGCGAGGATCCCAAGAAGCACCTGGCTCACCCT ACACTAAAAGGACTCCCTGTTAACCGCCTCCGGCATGCCGTGAGGTCGGTTACTTTCCTG ATCAGATTGCAGAGAAGAGGTTTATCAGAACAGAAAATCGGATAA

Peptide Sequence

PEP ID	Zm00001d041229_P005
PEP Infomation	pep chromosome:B73_RefGen_v4:3:106710015:106715943:1 gene:Zm00001d041229 transcript:Zm00001d041229_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:CSC1-like protein RXW8
Sequence	MTGAKKAYKKFKHFTDETVDQGCRTVTYRCCLCGASSNSFKLLNTECEQNKGKADNKSIL DLDDEECTTAFVFFKTRYAALIASEILQTSNPMKWVANLAPEPEDVYWSNLWLPYKQLWA RRIATLLGSIFFMFIFLIPVTFIQGLSQLEQLQQRLPFLRGILKKKYYMTQLVTGYLPSV ILQIFLYIVAPIMMLFSTLEGPTSHSERKRSACCKVLYFTVWNIFFANVLSGTVISQLNV LSSPKDIPVQLAKAVPGQATFFITYVLTSGWASLSSEVMQLFGLIWNFIIKYVLRMREDT EFVPSFPYHTEVPKVLLFGLLGFTFSVLAPLILPFLLVYFCLGYVVYRNQLLNVYRTRYD TGGLYWPIAYNTVIFSLVLTQIICLGVFGLKESPVAAGFTVPLIILTLLFNQYCRNRLLP LFKTFPAQDLIDMDREDERSGRMDEIHHGLHSAYCQFADTVDVPLDKIEIVGGDEEQGSS SGQSSVKETCEDPKKHLAHPTLKGLPVNRLRHAVRSVTFLIRLQRRGLSEQKIG

Transcript Sequence

Transcript ID	Zm00001d041229_T005
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:106710015:106715943:1 gene:Zm00001d041229 gene_biotype:protein_coding transcript_biotype:protein_coding description:CSC1-like protein RXW8
Sequence	AGGTTGGTTTGGATTCCTGTTCTGTTCGCACCGCCTCCGCCTCCCTCCCTCCCTCTCCCC TTCCGGACTCTCTGCTCTCCTCTGCTGCTAGTCCATCCATTAATCTCCTCTCCTCGCCAT CGCCGCACTCACGCTACGCTTCCCTCCTCAAGCCCGAGGGCTTCTCCGGGAAGGAATCGC CGCGCCGGGTTCCTGCAACGCCCCGCCCTTTGCGCACCCGGAGCAACTGAGTCGTGGCTA TCGAGGATGATGCCGCGTTTCAGATAACAGAGACTGTGAGAGTGCACGACACACTTGACA TGCAGAGATGAAGATCAGTGCGCTTCTCACCTCCGCGGGCATCAACATTGGCCTCTGTGT TCTCTTCCTGTCACTCTACTCCGTTCTCAGAAAGCAGCCGGCCAATGTCAGGGTCTACTT CGGCCGCAGGATCGCTGAGGAACACGATCGGCTCCGAGGGGCATTTATCTTGGAGAGGTT TGTCCCATCCACTGGATGGATAGTCAAAGCCCTGCAGTGTACTGAGGAAGAGATCCTGGC TGCTGCTGGGTTGGATGCTGTTGTTTTCAATAGAATTCTAGTATTCAGGAGTACAAGCAC ATTGCCAGGTTGAAGCTCCTTCATCTTACAAGCGCAACACCAAAACCAAACCATTTTACA GTTCTTGTTCGTGGAATACCAAAGGCAGATAAAGAATCATGCAGTGATGTTGTTGATAAT TTCTTCACAAAGTATCACTCATCTAGTTATCTCTTCCATCAAGTAGTTTACAAAGTCGGG AAAGTTCAGAAGATAATGACTGGCGCAAAGAAGGCATATAAGAAGTTCAAACATTTCACA GATGAAACTGTCGATCAAGGTTGCAGGACAGTTACCTACCGCTGTTGTCTGTGTGGAGCT TCTTCAAATTCTTTCAAGTTGTTGAACACTGAGTGTGAGCAGAACAAGGGGAAAGCGGAC AATAAATCCATCTTGGACTTAGACGATGAGGAATGCACAACTGCTTTTGTATTTTTCAAA ACTCGGTATGCAGCACTTATTGCGTCAGAAATACTTCAAACATCTAACCCTATGAAATGG GTTGCTAATCTTGCTCCAGAACCAGAAGACGTGTATTGGTCCAATCTTTGGCTACCCTAT AAGCAACTTTGGGCTCGCCGTATTGCTACACTCCTAGGCTCTATCTTTTTCATGTTCATA TTTCTGATACCGGTGACATTTATACAAGGACTATCTCAGCTAGAGCAGTTGCAGCAGAGG CTTCCTTTCCTAAGAGGAATATTGAAGAAGAAATACTACATGACTCAGCTAGTAACTGGG TACCTTCCCAGTGTCATACTGCAAATCTTCCTGTACATTGTTGCTCCAATTATGATGCTG TTTTCTACATTGGAGGGCCCTACATCTCACAGTGAAAGGAAGAGAAGTGCTTGCTGTAAA GTGCTGTACTTTACAGTTTGGAACATATTCTTTGCTAATGTATTATCTGGTACTGTCATT AGTCAATTGAATGTGTTATCAAGCCCAAAGGACATACCTGTCCAGCTTGCTAAAGCTGTA CCTGGACAGGCCACTTTCTTCATCACCTATGTCCTGACCTCAGGATGGGCTAGTTTGTCA TCTGAAGTTATGCAACTCTTTGGTCTGATATGGAACTTTATAATCAAATACGTTCTGAGA ATGAGAGAAGATACAGAATTCGTTCCCTCGTTTCCTTACCACACAGAAGTACCAAAAGTT CTGTTGTTTGGACTATTGGGCTTCACATTTTCTGTGCTGGCTCCTCTGATCTTACCTTTT CTGCTGGTGTACTTTTGTCTTGGTTATGTTGTATACCGCAATCAGTTGCTCAATGTGTAT CGAACAAGGTATGACACAGGTGGTTTGTATTGGCCAATTGCATACAACACAGTCATATTC TCACTTGTGCTCACCCAGATCATCTGCCTTGGTGTATTTGGCCTTAAAGAATCGCCGGTA GCTGCAGGCTTCACTGTACCTCTTATCATCCTTACTCTTTTGTTTAACCAGTACTGCAGA AACCGGCTTCTTCCATTATTCAAGACTTTTCCAGCACAGGATTTAATCGACATGGACAGG GAAGATGAACGATCAGGAAGAATGGATGAAATTCACCACGGACTTCATTCTGCTTATTGC CAGTTCGCTGACACTGTAGATGTGCCCTTGGATAAAATTGAAATCGTTGGTGGGGATGAG GAGCAAGGCTCTAGCTCGGGTCAGTCCAGTGTTAAAGAAACGTGCGAGGATCCCAAGAAG CACCTGGCTCACCCTACACTAAAAGGACTCCCTGTTAACCGCCTCCGGCATGCCGTGAGG TCGGTTACTTTCCTGATCAGATTGCAGAGAAGAGGTTTATCAGAACAGAAAATCGGATAA TTAGTTAGCCGCCAACCCCCTTTGCTTGTTGGCTATATAAATGTACAGAGGCATACATGC ATATACGATCGTTCCCTTAGAAGAGAGAAGGGCTAATGTAGAAGTCTGTGGGAGAACATC ATCATGAGTGTTGAGGTGCAATTTTGTTTTGTCGCATGGATGAGTTTGTTGGTTCTGCGG GTTATCTGGCAGATTCAGCTACCCAAACCTTAGCCTTGCACGTTGATGAAATTAATGCTC ATGGTTTTGTTGTAAGAGATTAATGTGGCCAAAGTGATCTAGATGTATAATGTCCTCCTC TC