Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d041142_T031
CDS Infomation

cds chromosome:B73_RefGen_v4:3:100235416:100238142:1 gene:Zm00001d041142 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:bZIP-transcription factor 3 description:bZIP transcription factor 16
Sequence

ATGATTCCACCATATGGAGCACCGCCATATGTCATGTACCCTCCTGGAGTGTATGCACAC
CCATCTATGGCCTCGGGTGCACATCCATTTACTCCTTATGCCATTACTTCTCCAAATGGC
AATGCTGATGCTACTGGAACTACTGCTGTAGCTTGTGATACTGATGGCAAGCCCTCTGAA
GGCAAAGATAAAAGTCCAACTAAGAGACCCAAAGGAACTTTGGGCAGCTTGAACATGCTT
ACTGGAAAGAACCCCAGTGAACATGGTAAGACCTCAGGTGCATCAGCTAATGGAGCCACT
TCTCAAAGTGGCGAAAGTGGCAGTGACAGTTCAAGCGAAGGGAGTGAAGGAAATTCTCAT
AATGATTCATACAAGCATAGTGGACAGGAACAAGATGGAGACGTACGAAGTTCCCAGAAT
GGTGCATCACGTTCTCCATCTGAGGGAAAATTTAACCAAGCTATGGCAATCATGCCCATG
CCATCAAGTGGCCCAGTAACTGGTCCAACTACAAACCTGAATATTGGGATGGACTATTGG
GCCAACACAGCAAGCTCTGCTCCTGTAATTCATGGCAAAGTGACCCCAACAACAGTTCCA
GGGGCTGTGGTCCCAGCAGAGCAATGGATACAGGATGAACGTGAACTCAAAAGGCAAAAA
AGAAAACAGTCTAATAGGGAGTCTGCACGCAGATCTAGGTTGCGTAAACAGGCTGAATGT
GAGGAGTTGGCTCAACGTGCTGATGTTTTAAAGCAGGAAAATGCTTCACTTAGAGATGAA
GTAAACCGTATCAGAAAAGAGTATGAGGAACTTCTATCAAAGAATAATTCACTAAAGGAA
AAACTTGAAGGCAAACAACACAAAACTGATGAGGCAGGACTTAACAACAAGCTGCAACAT
TCTGGCAATGACATCCAGAAAAAAGGAAACTAA

Peptide Sequence

PEP ID

Zm00001d041142_P031
PEP Infomation

pep chromosome:B73_RefGen_v4:3:100235416:100238142:1 gene:Zm00001d041142 transcript:Zm00001d041142_T031 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:bZIP-transcription factor 3 description:bZIP transcription factor 16
Sequence

MIPPYGAPPYVMYPPGVYAHPSMASGAHPFTPYAITSPNGNADATGTTAVACDTDGKPSE
GKDKSPTKRPKGTLGSLNMLTGKNPSEHGKTSGASANGATSQSGESGSDSSSEGSEGNSH
NDSYKHSGQEQDGDVRSSQNGASRSPSEGKFNQAMAIMPMPSSGPVTGPTTNLNIGMDYW
ANTASSAPVIHGKVTPTTVPGAVVPAEQWIQDERELKRQKRKQSNRESARRSRLRKQAEC
EELAQRADVLKQENASLRDEVNRIRKEYEELLSKNNSLKEKLEGKQHKTDEAGLNNKLQH
SGNDIQKKGN

Transcript Sequence

Transcript ID

Zm00001d041142_T031
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:100235416:100238142:1 gene:Zm00001d041142 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:bZIP-transcription factor 3 description:bZIP transcription factor 16
Sequence

TCAGCCTATGATTCCACCATATGGAGCACCGCCATATGTCATGTACCCTCCTGGAGTGTA
TGCACACCCATCTATGGCCTCGGGTGCACATCCATTTACTCCTTATGCCATTACTTCTCC
AAATGGCAATGCTGATGCTACTGGAACTACTGCTGTAGCTTGTGATACTGATGGCAAGCC
CTCTGAAGGCAAAGATAAAAGTCCAACTAAGAGACCCAAAGGAACTTTGGGCAGCTTGAA
CATGCTTACTGGAAAGAACCCCAGTGAACATGGTAAGACCTCAGGTGCATCAGCTAATGG
AGCCACTTCTCAAAGTGGCGAAAGTGGCAGTGACAGTTCAAGCGAAGGGAGTGAAGGAAA
TTCTCATAATGATTCATACAAGCATAGTGGACAGGAACAAGATGGAGACGTACGAAGTTC
CCAGAATGGTGCATCACGTTCTCCATCTGAGGGAAAATTTAACCAAGCTATGGCAATCAT
GCCCATGCCATCAAGTGGCCCAGTAACTGGTCCAACTACAAACCTGAATATTGGGATGGA
CTATTGGGCCAACACAGCAAGCTCTGCTCCTGTAATTCATGGCAAAGTGACCCCAACAAC
AGTTCCAGGGGCTGTGGTCCCAGCAGAGCAATGGATACAGGATGAACGTGAACTCAAAAG
GCAAAAAAGAAAACAGTCTAATAGGGAGTCTGCACGCAGATCTAGGTTGCGTAAACAGGC
TGAATGTGAGGAGTTGGCTCAACGTGCTGATGTTTTAAAGCAGGAAAATGCTTCACTTAG
AGATGAAGTAAACCGTATCAGAAAAGAGTATGAGGAACTTCTATCAAAGAATAATTCACT
AAAGGAAAAACTTGAAGGCAAACAACACAAAACTGATGAGGCAGGACTTAACAACAAGCT
GCAACATTCTGGCAATGACATCCAGAAAAAAGGAAACTAATCGAGCTATCATGCAATGCT
TGCATAGCATGGCCCTAACTAGATTATTGGGAGGCGCAATTGTAGTATGCGTGTTAACTC
CTTACTTTATTGCAGTTAATTGTTACCAGGTTGTGATAATGTTGATGCCAACCTTGTGTG
TGGGTGTTTCCTGTTTCAGATCTATCTTGGCTTATCTTTTAGAAGTCAAGATGTGACTGA
AGATGTAGGCTGTGACCCAGTTCACTGTATCTGAAATAGTGGATAAACTCAAATTTACAA
TTTGTATTGCTG