Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d041073_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:3:95280130:95310416:1 gene:Zm00001d041073 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase RGLG1
Sequence	ATGAGCGGCTTCTTGGCGGTGGTCGGCAAGGTCGGCACCTTTCTGCTGTGGGTGCTGTTC CTGGTCTTGCAGACCGCCACCAGGATCGTCGGCAGCCTCCTTGCCAGCTCAGCTGAGCAG CAGGATGACCACCATCAGGAATCGGCGGCGGCACGGCGCAGGTCGCCGCCAGCCTCCCCA CATCCCGAACTTTACGAGCCGGCGTCTGCGTCTCTGGCGCAGCTGTGGGACCCACCGCCT CTTCCGCACCTTGCTTTTGCTCCCGCTGCGGATGAGAGCTCTTCGTCCTCCAGCTTACGG CGGCGTGCCAGTGCGCCGCTGCCCCGAGCGGATGAAGACTTTGTGGTGCCATCGAGCGCT TACTCGCGTCCAACAGTGGGGGTGGCTCATACACACTCTGTGTCAGCACCACCACTGAGG GCAATCGAGACGCGGGCGGTGCCATCTAGGCTGGTGACAGCCGGGGGTAAGCGGCCAAGG CTGGAGAGGAAGTACTCCAAGATTGTTGACCAGTACCGATCCTTGGATGAGGTTATTGAA GCATTAGCACAGGCTGGTCTTGAGTCTTCTAATTTGATCATAGGAATTGATTTCACAAAG AGTAATGAATGGACAGGAAAGAATTGCTTCAATGGTATGAGCCTGCATAATATCAGTGAC AACCCAAATCCTTATGAACAGGCAATATCCATCATTGGGAAAACCTTATCTGCTTTTGAT GAGGATAATTTAATTCCTTGCTTTGGTTTTGGAGACGCATCTACTCATGACCAAGATGTA TTTGCCTTCTATCCTGATGAAAGACCATGCAATGGTTTTCAAGAAGCTTTAGCTCGATAC AGAGAGATTGTACCTCATCTTCGCCTTTCGGGTCCTACGTCATTCGCCCCAATAATTGAC ATGGCCACAACCATTGTGGAGCAAAGTGGTGGCCAATACCATGTTTTAGTAATTATTGCT GACGGGCAGGTCACAAGAAGTGTAGATACTGAATTTGGTCAGTTAAGCACCCAGGAGCAA ATGACAGTTGATGCTATTGTACAAGCAAGCCAATTCCCATTGTCTATAATTCTTGTTGGA GTTGGAGATGGTCCATGGGATATGATGAAGGAATTTGATGACAATATACCAGCTAGGTCT TTTGACAATTTCCAGTTTGTCAACTTCACTGCGATCATGTCAAAAAAGATAAGTCAAAGC AAAAAGGAGACAGAGTTCGCCCTTTCAGCACTAATGGAAATTCCATTGCAATACAAGGCA ACATTAGAGCTTGGAATTTTAGGACGTCGAATTGGAGAGTCACCTGAGCGGATTCCACTT CCTCCTCCTTTTGCAAGTTATAGCACAGTTTCAAGAGCAGAACCATCTCGGGCAAATAGT TATCGAAGTGTGCCTTCACATCCAAGGGAGGAGCCAGCTGTAAATTCAACTATCACAGCA TCAGTTACATCCCCATCAGCTGCCGAAAGTAGAGTTTTAGAACCCCAGATGTGCCCAGTT TGCCTTTCCAAACCCCGGGACATGGCATTTGGTTGTGGCCACCAGACATGTTCAGAATGT GGACCGCAAGTCACAGATTGCCCCATCTGTCGAAGGCCCATTGACACGAGAGTAAAATTG TACTAA

Peptide Sequence

PEP ID	Zm00001d041073_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:3:95280130:95310416:1 gene:Zm00001d041073 transcript:Zm00001d041073_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase RGLG1
Sequence	MSGFLAVVGKVGTFLLWVLFLVLQTATRIVGSLLASSAEQQDDHHQESAAARRRSPPASP HPELYEPASASLAQLWDPPPLPHLAFAPAADESSSSSSLRRRASAPLPRADEDFVVPSSA YSRPTVGVAHTHSVSAPPLRAIETRAVPSRLVTAGGKRPRLERKYSKIVDQYRSLDEVIE ALAQAGLESSNLIIGIDFTKSNEWTGKNCFNGMSLHNISDNPNPYEQAISIIGKTLSAFD EDNLIPCFGFGDASTHDQDVFAFYPDERPCNGFQEALARYREIVPHLRLSGPTSFAPIID MATTIVEQSGGQYHVLVIIADGQVTRSVDTEFGQLSTQEQMTVDAIVQASQFPLSIILVG VGDGPWDMMKEFDDNIPARSFDNFQFVNFTAIMSKKISQSKKETEFALSALMEIPLQYKA TLELGILGRRIGESPERIPLPPPFASYSTVSRAEPSRANSYRSVPSHPREEPAVNSTITA SVTSPSAAESRVLEPQMCPVCLSKPRDMAFGCGHQTCSECGPQVTDCPICRRPIDTRVKL Y

Transcript Sequence

Transcript ID	Zm00001d041073_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:95280130:95310416:1 gene:Zm00001d041073 gene_biotype:protein_coding transcript_biotype:protein_coding description:E3 ubiquitin-protein ligase RGLG1
Sequence	ACCAAATTCCCCTGACCCGTCGGTCTGCTATCCCATCTGAGCTCACGGCGATCCTCTTTC TCCTCATCGGCATGAGCGGCTTCTTGGCGGTGGTCGGCAAGGTCGGCACCTTTCTGCTGT GGGTGCTGTTCCTGGTCTTGCAGACCGCCACCAGGATCGTCGGCAGCCTCCTTGCCAGCT CAGCTGAGCAGCAGGATGACCACCATCAGGAATCGGCGGCGGCACGGCGCAGGTCGCCGC CAGCCTCCCCACATCCCGAACTTTACGAGCCGGCGTCTGCGTCTCTGGCGCAGCTGTGGG ACCCACCGCCTCTTCCGCACCTTGCTTTTGCTCCCGCTGCGGATGAGAGCTCTTCGTCCT CCAGCTTACGGCGGCGTGCCAGTGCGCCGCTGCCCCGAGCGGATGAAGACTTTGTGGTGC CATCGAGCGCTTACTCGCGTCCAACAGTGGGGGTGGCTCATACACACTCTGTGTCAGCAC CACCACTGAGGGCAATCGAGACGCGGGCGGTGCCATCTAGGCTGGTGACAGCCGGGGGTA AGCGGCCAAGGCTGGAGAGGAAGTACTCCAAGATTGTTGACCAGTACCGATCCTTGGATG AGGTTATTGAAGCATTAGCACAGGCTGGTCTTGAGTCTTCTAATTTGATCATAGGAATTG ATTTCACAAAGAGTAATGAATGGACAGGAAAGAATTGCTTCAATGGTATGAGCCTGCATA ATATCAGTGACAACCCAAATCCTTATGAACAGGCAATATCCATCATTGGGAAAACCTTAT CTGCTTTTGATGAGGATAATTTAATTCCTTGCTTTGGTTTTGGAGACGCATCTACTCATG ACCAAGATGTATTTGCCTTCTATCCTGATGAAAGACCATGCAATGGTTTTCAAGAAGCTT TAGCTCGATACAGAGAGATTGTACCTCATCTTCGCCTTTCGGGTCCTACGTCATTCGCCC CAATAATTGACATGGCCACAACCATTGTGGAGCAAAGTGGTGGCCAATACCATGTTTTAG TAATTATTGCTGACGGGCAGGTCACAAGAAGTGTAGATACTGAATTTGGTCAGTTAAGCA CCCAGGAGCAAATGACAGTTGATGCTATTGTACAAGCAAGCCAATTCCCATTGTCTATAA TTCTTGTTGGAGTTGGAGATGGTCCATGGGATATGATGAAGGAATTTGATGACAATATAC CAGCTAGGTCTTTTGACAATTTCCAGTTTGTCAACTTCACTGCGATCATGTCAAAAAAGA TAAGTCAAAGCAAAAAGGAGACAGAGTTCGCCCTTTCAGCACTAATGGAAATTCCATTGC AATACAAGGCAACATTAGAGCTTGGAATTTTAGGACGTCGAATTGGAGAGTCACCTGAGC GGATTCCACTTCCTCCTCCTTTTGCAAGTTATAGCACAGTTTCAAGAGCAGAACCATCTC GGGCAAATAGTTATCGAAGTGTGCCTTCACATCCAAGGGAGGAGCCAGCTGTAAATTCAA CTATCACAGCATCAGTTACATCCCCATCAGCTGCCGAAAGTAGAGTTTTAGAACCCCAGA TGTGCCCAGTTTGCCTTTCCAAACCCCGGGACATGGCATTTGGTTGTGGCCACCAGACAT GTTCAGAATGTGGACCGCAAGTCACAGATTGCCCCATCTGTCGAAGGCCCATTGACACGA GAGTAAAATTGTACTAATTATTTTTGGGTGGAACTAGGTTTAACTGAAGCACATGCCAGG AGTAGAATCCACTAAAATAAATCTCTATTTGACTGTTAACGATGTAGTGTGAATTAATTT AATAAATCAGACGTAGAGAAAAGGAGGATACTTGTTCTTTGCTTGTATCCTGTTCCTACA TTGTGCGTTGATAGATGTGAGGCTACTTCCATTATCTGATACTGGACAGGCGCCCTACTT CGCTGCGGCGATTACATATAATGTTGAAGTATGGTTATGGTTTGTCTGTAAACTGGATGG TATTTGGCTTGTTAGTATGGATAACCTAGCTTGTATATAAAGAGACAATCATTAGTAGAT GATGTGGTTTGCTAATATGAATAACTAAACACTCCCTCTATTCC