Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d041035_T005
CDS Infomation	cds chromosome:B73_RefGen_v4:3:92247852:92264499:1 gene:Zm00001d041035 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin carboxyl-terminal hydrolase 13
Sequence	ATGCTGGTGCCGCATCAGGAGCTCCCTGTCGCTGGCCCAGAAGCAGCCCCACAGCCGATG GAAGTTGTTGCGCAGACAGAGCCTGCCACCACAGCGGAGAGCCAGCCGCCTGAGGACCCG CAGACGACGCGCTTCACCTGGACGATCGAGAGCTTCAGCCGTCTTAACACTAAGAAGCAC TACTCTGATGTATTTGTCGTTGGAGGATACAAATGGCGTGTCCTAATTTTCCCCAAGGGG AACAATGTGGATCACTTCTCGATGTATTTGGATGTTGCAGATTCTGGGAACCTCCCATAC GGGTGGAGCCGGTATGCTCAGTTCAGCTTGGCTGTTGTGAATCAGATCCATCCTAAGTAT ACGATTCGGAAAGATACTCAGCACCAATTTAATGCACGTGAGAGCGACTGGGGTTTCACA TCATTTATGCCTTTGAGTGACCTATATGACCCAAGCAGGGGCTATCTTGTGAATGACACC ATTATTGTGGAAGCTGAGGTTGCTGTCCGCAGAATGGTTGATTATTGGACTTATGACTCG AAAAAAGAAACAGGTTTTGTAGGTCTTAAGAATCAAGGTGCTACCTGTTATATGAATTCT CTCCTTCAAACGTTATACCATACACCATATTTTAGAAAGGCTGTATATCATATGCCAACA ACTGAGAATGACATGCCATCTGGGAGTATCCCTTTAGCCCTGCAGAGCCTGTTTTACAAG CTACAGTATAGTGACAACAGTGTAGCAACGAAAGAGTTGACTAAATCCTTTGGATGGGAT ACCTATGATTCTTTCATGCAGCATGATGTGCAAGAACTCAACAGAGTTCTTTGTGAGAAA CTGGAAGATAAGATGAAGGGAACTGTTGTGGAAGGAACAATTGAACAATTATTCGAAGGC CACCACATTAATTACATTGAGTGCATTAACGTGGACTATAAATCTAACAGAAAAGAATCA TTTTATGATCTACAACTTGATGTGAAAGGTTGTCGTGATGTTTATGCATCATTTGATAAG TATGTGGAAGTGGAGAGTCTAGAGGGTGATAACAAGTACCATGCGGAGCGTTATGGCTTA CAGGATGCAAGGAAAGGTGTGCTTTTCCTTGATTTCCCTCCTGTTTTGCAGCTTCAACTG AAGCGTTTTGAATATGATTACATGCGAGATACAATGGTTAAGATTAATGACCGCTATGAG TTCCCTCTTCAACTTGATCTTGATAGAGACAATGGAAAATATCTATCTCCAGATGCAGAT CGAAGTATTAGAAACCTCTATACTCTTCACAGTGTTCTTGTTCATAGTGGAGGAGTACAT GGTGGTCACTACTATGCTTTCATTCGGCCGACACTCTCGGATCAGTGGTACAAATTCGAT GATGAGCGGGTTACAAAAGAAGACACTAAAAAGGCACTTGAAGAGCAGTATGGGGGTGAG GAAGAGTTGCCTCAAATAAACCCTGGTTTCAATAACACACCATTCAAATTCACAAAGTAT TCAAATGCCTACATGCTTGTCTATATACGTGAGAATGACAAGGATAAAATAATGTGTAAT GTCGATGAGAAGGATATTGCTGAGCATTTGCGGATAAGGTTGAAGAAAGAACAAGAAGAG AAAGAGCACAAGAAGAAGGAGAAGTCTGAAGCTCATCTCTACACTATCATAAAGATTGCT CGAGACAAGGATTTAAAGGAGCAAATTGGTAAAAATATATATTTTGACCTGGTGGACCAT GAAAAAGTTTGCAGCTTCCGCATTCAGAAGCAGTTGCCTTTTACTGCATTCCAGGAGGAA GTTGCAAAGGAATTTGGCATCCCAGTACAGTTTCAGCGCTTCTGGTTGTGGGCTAAGAGG CAGAACCATACATACCGCCCGAATCGTCCATTGACCCCCCATGAGGAAGCACAATCAGTC GGGCAGCTTAGGGAAGTCTCAAATAAGGCACACAATGCTGAGCTGAAGCTGTTTTTGGAA GTTGAACTTGGACCGGAGCTATGTCCAATTCGTCCACCTGAGAAGAGCAAAGAAGACATA CTTCTTTTCTTCAAGCTCTATAATGCCGAGAAGGAAGAACTTTGTTTTGTCGGTAGGCTT TTTGTGAAGGCTCTGGGAAAACCGTCTGAAATATTGACAAAACTGAATGAAATGGCTGGA TTTTCTCCAAATGAAGAAATTGAGCTATATGAGGAAATTAAGTTTGAGCCAAATGTGATG TGCGAACATATTGACAAGAAACTTACTTTCCGTTCTAGTCAGCTTGAAGATGGAGACATC ATCTGTTTCCAAAAGGCTCCTGTTCCAGATGGTGATCCACAAGTGCGCTATCCAGATGTC CCTTCATTCTTGGAGTATGTTCACAATAGGCAGGTTGTGCACTTTCGGTCTCTGGACAAA CCAAAGGATGATGATTTTTCTTTGGAATTGTCAAAGCTTCATACTTATGATGATGTTGTT GAGAGAGTTGCACATAAACTTGGGTTGGATGATCCATCAAAGATTCGGCTTACATCTCAC AATTGTTATTCTCAGCAACCTAAACCACAACCTATTAGATATAGGGGAGTAGAACATCTA CTGGATATGCTTGTGCATTATAACCAGACTTCTGATATCTTGTATTATGAGGTTCTGGAC ATTCCACTGCCAGAATTGCAGTGTTTGAAAACGCTTAAAGTTGCATTCCACCATGCAACA AAAGATGAGGTGGTTGTTCATAGCATAAGACTTCCAAGAAACAGCACCATCAGTGACGTG ATCACTGATTTGAAAACCAAGGTTGAACTATCAAATCCTGATACTGAGCTCCGCTTGCTT GAAGTATTTTACCACAAGATTTATAAGATTTTTCCGCCTCATGAGAAGATAGAGAACATA AATGATCAGTACTGGACATTACGAGCTGAGGAGATTCCAGAGGAAGAGAAGAATCTTGGC CCACATGACCGTTTGATTCATGTTTATCATTTTATGAAAGACCCTAATCAGAATCAGCAG ATTCAGAATTTCGGAGATCCTTTTTTGATGGTTATCCGTGAAGTTGAGACTGCTGCAGAG GTACTGGAGCGCATCCAAAGAAAACTTAGAGTTCCGGATGAGGACTTCTCCAAGTGGAAG CTTGCATTCATATCCATGAACCGGCCAGAGTACCTCCAGGACACTGATGTTGTATCAGCA CGTTTTCAGAGGAGAGATGTATATGGTGCTTGGGAACAATACCTTGGCTTGGAGCACACC GATACAACATCGAAAAGGTCTTACACAGCCAATCAGAATCGGCACACCTATGAGAAGCCC GTGAAAATTTATAATTGA

Peptide Sequence

PEP ID	Zm00001d041035_P005
PEP Infomation	pep chromosome:B73_RefGen_v4:3:92247852:92264499:1 gene:Zm00001d041035 transcript:Zm00001d041035_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin carboxyl-terminal hydrolase 13
Sequence	MLVPHQELPVAGPEAAPQPMEVVAQTEPATTAESQPPEDPQTTRFTWTIESFSRLNTKKH YSDVFVVGGYKWRVLIFPKGNNVDHFSMYLDVADSGNLPYGWSRYAQFSLAVVNQIHPKY TIRKDTQHQFNARESDWGFTSFMPLSDLYDPSRGYLVNDTIIVEAEVAVRRMVDYWTYDS KKETGFVGLKNQGATCYMNSLLQTLYHTPYFRKAVYHMPTTENDMPSGSIPLALQSLFYK LQYSDNSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGTVVEGTIEQLFEG HHINYIECINVDYKSNRKESFYDLQLDVKGCRDVYASFDKYVEVESLEGDNKYHAERYGL QDARKGVLFLDFPPVLQLQLKRFEYDYMRDTMVKINDRYEFPLQLDLDRDNGKYLSPDAD RSIRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKEDTKKALEEQYGGE EELPQINPGFNNTPFKFTKYSNAYMLVYIRENDKDKIMCNVDEKDIAEHLRIRLKKEQEE KEHKKKEKSEAHLYTIIKIARDKDLKEQIGKNIYFDLVDHEKVCSFRIQKQLPFTAFQEE VAKEFGIPVQFQRFWLWAKRQNHTYRPNRPLTPHEEAQSVGQLREVSNKAHNAELKLFLE VELGPELCPIRPPEKSKEDILLFFKLYNAEKEELCFVGRLFVKALGKPSEILTKLNEMAG FSPNEEIELYEEIKFEPNVMCEHIDKKLTFRSSQLEDGDIICFQKAPVPDGDPQVRYPDV PSFLEYVHNRQVVHFRSLDKPKDDDFSLELSKLHTYDDVVERVAHKLGLDDPSKIRLTSH NCYSQQPKPQPIRYRGVEHLLDMLVHYNQTSDILYYEVLDIPLPELQCLKTLKVAFHHAT KDEVVVHSIRLPRNSTISDVITDLKTKVELSNPDTELRLLEVFYHKIYKIFPPHEKIENI NDQYWTLRAEEIPEEEKNLGPHDRLIHVYHFMKDPNQNQQIQNFGDPFLMVIREVETAAE VLERIQRKLRVPDEDFSKWKLAFISMNRPEYLQDTDVVSARFQRRDVYGAWEQYLGLEHT DTTSKRSYTANQNRHTYEKPVKIYN

Transcript Sequence

Transcript ID	Zm00001d041035_T005
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:92247852:92264499:1 gene:Zm00001d041035 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ubiquitin carboxyl-terminal hydrolase 13
Sequence	CGTGCTCTCCTTCACTGGCTACCTCGCCCCGATCTCCGCGGCCAGTTCCCCCTCGCCGCT GCGCCGATCTAGAGTGCTCGGGTTCGCACCAGGGTTTAAGCGCCGGGCCGGATCTGACTC CTCAGCCCGCGCTCTTCCCTCCTCGCAGCAGCAGCAGGAGGACGACGAGATGCTGGTGCC GCATCAGGAGCTCCCTGTCGCTGGCCCAGAAGCAGCCCCACAGCCGATGGAAGTTGTTGC GCAGACAGAGCCTGCCACCACAGCGGAGAGCCAGCCGCCTGAGGACCCGCAGACGACGCG CTTCACCTGGACGATCGAGAGCTTCAGCCGTCTTAACACTAAGAAGCACTACTCTGATGT ATTTGTCGTTGGAGGATACAAATGGCGTGTCCTAATTTTCCCCAAGGGGAACAATGTGGA TCACTTCTCGATGTATTTGGATGTTGCAGATTCTGGGAACCTCCCATACGGGTGGAGCCG GTATGCTCAGTTCAGCTTGGCTGTTGTGAATCAGATCCATCCTAAGTATACGATTCGGAA AGATACTCAGCACCAATTTAATGCACGTGAGAGCGACTGGGGTTTCACATCATTTATGCC TTTGAGTGACCTATATGACCCAAGCAGGGGCTATCTTGTGAATGACACCATTATTGTGGA AGCTGAGGTTGCTGTCCGCAGAATGGTTGATTATTGGACTTATGACTCGAAAAAAGAAAC AGGTTTTGTAGGTCTTAAGAATCAAGGTGCTACCTGTTATATGAATTCTCTCCTTCAAAC GTTATACCATACACCATATTTTAGAAAGGCTGTATATCATATGCCAACAACTGAGAATGA CATGCCATCTGGGAGTATCCCTTTAGCCCTGCAGAGCCTGTTTTACAAGCTACAGTATAG TGACAACAGTGTAGCAACGAAAGAGTTGACTAAATCCTTTGGATGGGATACCTATGATTC TTTCATGCAGCATGATGTGCAAGAACTCAACAGAGTTCTTTGTGAGAAACTGGAAGATAA GATGAAGGGAACTGTTGTGGAAGGAACAATTGAACAATTATTCGAAGGCCACCACATTAA TTACATTGAGTGCATTAACGTGGACTATAAATCTAACAGAAAAGAATCATTTTATGATCT ACAACTTGATGTGAAAGGTTGTCGTGATGTTTATGCATCATTTGATAAGTATGTGGAAGT GGAGAGTCTAGAGGGTGATAACAAGTACCATGCGGAGCGTTATGGCTTACAGGATGCAAG GAAAGGTGTGCTTTTCCTTGATTTCCCTCCTGTTTTGCAGCTTCAACTGAAGCGTTTTGA ATATGATTACATGCGAGATACAATGGTTAAGATTAATGACCGCTATGAGTTCCCTCTTCA ACTTGATCTTGATAGAGACAATGGAAAATATCTATCTCCAGATGCAGATCGAAGTATTAG AAACCTCTATACTCTTCACAGTGTTCTTGTTCATAGTGGAGGAGTACATGGTGGTCACTA CTATGCTTTCATTCGGCCGACACTCTCGGATCAGTGGTACAAATTCGATGATGAGCGGGT TACAAAAGAAGACACTAAAAAGGCACTTGAAGAGCAGTATGGGGGTGAGGAAGAGTTGCC TCAAATAAACCCTGGTTTCAATAACACACCATTCAAATTCACAAAGTATTCAAATGCCTA CATGCTTGTCTATATACGTGAGAATGACAAGGATAAAATAATGTGTAATGTCGATGAGAA GGATATTGCTGAGCATTTGCGGATAAGGTTGAAGAAAGAACAAGAAGAGAAAGAGCACAA GAAGAAGGAGAAGTCTGAAGCTCATCTCTACACTATCATAAAGATTGCTCGAGACAAGGA TTTAAAGGAGCAAATTGGTAAAAATATATATTTTGACCTGGTGGACCATGAAAAAGTTTG CAGCTTCCGCATTCAGAAGCAGTTGCCTTTTACTGCATTCCAGGAGGAAGTTGCAAAGGA ATTTGGCATCCCAGTACAGTTTCAGCGCTTCTGGTTGTGGGCTAAGAGGCAGAACCATAC ATACCGCCCGAATCGTCCATTGACCCCCCATGAGGAAGCACAATCAGTCGGGCAGCTTAG GGAAGTCTCAAATAAGGCACACAATGCTGAGCTGAAGCTGTTTTTGGAAGTTGAACTTGG ACCGGAGCTATGTCCAATTCGTCCACCTGAGAAGAGCAAAGAAGACATACTTCTTTTCTT CAAGCTCTATAATGCCGAGAAGGAAGAACTTTGTTTTGTCGGTAGGCTTTTTGTGAAGGC TCTGGGAAAACCGTCTGAAATATTGACAAAACTGAATGAAATGGCTGGATTTTCTCCAAA TGAAGAAATTGAGCTATATGAGGAAATTAAGTTTGAGCCAAATGTGATGTGCGAACATAT TGACAAGAAACTTACTTTCCGTTCTAGTCAGCTTGAAGATGGAGACATCATCTGTTTCCA AAAGGCTCCTGTTCCAGATGGTGATCCACAAGTGCGCTATCCAGATGTCCCTTCATTCTT GGAGTATGTTCACAATAGGCAGGTTGTGCACTTTCGGTCTCTGGACAAACCAAAGGATGA TGATTTTTCTTTGGAATTGTCAAAGCTTCATACTTATGATGATGTTGTTGAGAGAGTTGC ACATAAACTTGGGTTGGATGATCCATCAAAGATTCGGCTTACATCTCACAATTGTTATTC TCAGCAACCTAAACCACAACCTATTAGATATAGGGGAGTAGAACATCTACTGGATATGCT TGTGCATTATAACCAGACTTCTGATATCTTGTATTATGAGGTTCTGGACATTCCACTGCC AGAATTGCAGTGTTTGAAAACGCTTAAAGTTGCATTCCACCATGCAACAAAAGATGAGGT GGTTGTTCATAGCATAAGACTTCCAAGAAACAGCACCATCAGTGACGTGATCACTGATTT GAAAACCAAGGTTGAACTATCAAATCCTGATACTGAGCTCCGCTTGCTTGAAGTATTTTA CCACAAGATTTATAAGATTTTTCCGCCTCATGAGAAGATAGAGAACATAAATGATCAGTA CTGGACATTACGAGCTGAGGAGATTCCAGAGGAAGAGAAGAATCTTGGCCCACATGACCG TTTGATTCATGTTTATCATTTTATGAAAGACCCTAATCAGAATCAGCAGATTCAGAATTT CGGAGATCCTTTTTTGATGGTTATCCGTGAAGTTGAGACTGCTGCAGAGGTACTGGAGCG CATCCAAAGAAAACTTAGAGTTCCGGATGAGGACTTCTCCAAGTGGAAGCTTGCATTCAT ATCCATGAACCGGCCAGAGTACCTCCAGGACACTGATGTTGTATCAGCACGTTTTCAGAG GAGAGATGTATATGGTGCTTGGGAACAATACCTTGGCTTGGAGCACACCGATACAACATC GAAAAGGTCTTACACAGCCAATCAGAATCGGCACACCTATGAGAAGCCCGTGAAAATTTA TAATTGAGAAAACTTAAAGTTTCAATCGATTGACGGAGGCCTCGACAACAGTATGCCCAA GATGATGAGGCTTAGAACAGAAAAATTGGCAGAGGAATATAGTTGCTGCCTGTGCTGAGG CCTATACAAGCCCATGAATGCCACGTCAACCTTCAGTGTTCCAAGCAACCAAGCATGTGT GTTGGTTTTTTCATCGTGTCTAGTATGATGGCCCCTGCTAGGATAGTTTGCTTAATTTGT AGAGCAAAGCGAGTACATAAAAAAAGATTTTTGGTAGGGGGCATGTATACAGGATTATAG CCGATACTGATTGCTGCCGCTTGCTGCTGTGGGAACAATGGCAGAGATTGTATAATGGGT TTGTTATTGGTTCCTAATTTTCGTGATGTTGAGAAATGTAAGAGGAGAACCGCGTGGATA GTACAGTTTTGAGTTCCAGCCTAACAGAACTTCTGAGACCATTGCAACCCTA