Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d040996_T005
CDS Infomation	cds chromosome:B73_RefGen_v4:3:89082393:89084928:-1 gene:Zm00001d040996 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calcium-dependent protein kinase 1
Sequence	ATGGGCAACGTCTGCGTCGGGCCTCGATTCTCGAAGAACTGTGGCTTCTTCGGCAACTTC TCCCTGTGGCCCTCCCGCTCCCGCAACTCCGGCACCCCCTCCAACCCCACCACCACCTCC CGCTCCGTTCCCGTGGTCCAGGTCCAGCCGAGCGAATCCGACGCCAAGCCGCAGCCCGCG CAGAGCACCGCGGCTCCGGCACCCGTCGTCATATCCGAGCCGGCACAGCTTTCCCAGCCG CAGGTGGAGTCGGTGCTCCGGCGCAAGACCGACAACCTCAAGGACATGTACAGCCTGGGA CGGAAGCTCGGGCAGGGGCAGTTCGGCACCACGTACCTGTGCGTGGACAAGGCGACGGGG CTGGAGTACGCGTGCAAGTCAATCGCGAAGCGGAAGCTGGTCACCGACGAGGACGTGGAG GACGTCCGGCGCGAGATCCAGATCATGCACCACCTCGCGGGGCACCCCAACATCATCGCC ATCCGCGGCGCGTACGAGGACTCCGTGGCCGTGCACGTCGTCATGGAGCTCTGCGCCGGC GGGGAGCTGTTCGACCGCATCGTGCGGAGGGGGCACTACACGGAGCGGCAGGCGGGGGAG CTGGCCCGCGTCATCGTCGCCGTCGTGGAATCGTGCCACTCGCTCGGGGTCATGCACCGG GACCTCAAGCCGGAGAACTTCCTCTTCGTCGGCAACGACGAGGAGTCGCCGCTGAAGACC ATCGACTTCGGCCTCTCCATGTTCTTCCGCCCAGGCGAGGAGTTCACGGACGTCGTCGGG AGCCCGTACTACGTGGCGCCGGAGGTGCTGAAGAAGCGCTACGGGCAGGAGGCCGACGTG TGGAGCGCCGGCGTAATCATCTACATCCTTCTCTGCGGGGTGCCGCCGTTCTGGGCGGAG ACGGAGCAGGGCATCTTCGAGCAGGTGCTGCACGGCTCGCTGGACTTCGACTCCGACCCC TGGCCGAGCGTGTCGGGGGACGCCAAGGACCTGCTTCGGAAGGTGCTCGTCAGGGACCCC AAGAAGCGCCTCACCGCGCACCAAGTGCTATGCCACCCGTGGCTGCAGACCATCGCCTCT GCGCCTGATAAGCCGCTGGACTCTGCGGTGTTGTCCCGGCTGAAGCAGTTCTCGGCGATG AACAAGCTCAAGAAGATGGCGTTGAGGGTGATCGCGGAGAACCTGTCGGAGGAGGAGATC GCGGGGCTCAAGGAGATGTTCAAGATGATGGACACCGACAACAGTGGGCAGATCAATTTC GAGGAGCTCAAGGCCGGACTTGAGAAAGTCGGTGCTAACATGAAGGAGTCCGAGATATAT CAGCTCATGCAAGCTGCGGATATCGACAACAGTGGCACCATAGATTATGGAGAGTTCATA GCTGCCACACTGCATCTCAACAAAATTGAAAGGGAAGACCATCTCTTTGCCGCCTTCCAA TACTTTGATAAAGACGGCAGTGGATACATCACAGCTGATGAGCTGCAGCAAGCATGTGAC GAGTTCGGAATAGAGGATATCAGACTCGAAGACATGATTGGCGAAGTGGATCAAGACAAT GATGGGCGCATAGATTACAACGAGTTCGTCGCCATGATGCAAAAACCAACAGCCGGATAT GGCAAGAAAGGTCATCGGTATAACCTTAGCATTGGTTTTAGGGATGCTTTGAAGGCAAAT AGCTGA

Peptide Sequence

PEP ID	Zm00001d040996_P005
PEP Infomation	pep chromosome:B73_RefGen_v4:3:89082393:89084928:-1 gene:Zm00001d040996 transcript:Zm00001d040996_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calcium-dependent protein kinase 1
Sequence	MGNVCVGPRFSKNCGFFGNFSLWPSRSRNSGTPSNPTTTSRSVPVVQVQPSESDAKPQPA QSTAAPAPVVISEPAQLSQPQVESVLRRKTDNLKDMYSLGRKLGQGQFGTTYLCVDKATG LEYACKSIAKRKLVTDEDVEDVRREIQIMHHLAGHPNIIAIRGAYEDSVAVHVVMELCAG GELFDRIVRRGHYTERQAGELARVIVAVVESCHSLGVMHRDLKPENFLFVGNDEESPLKT IDFGLSMFFRPGEEFTDVVGSPYYVAPEVLKKRYGQEADVWSAGVIIYILLCGVPPFWAE TEQGIFEQVLHGSLDFDSDPWPSVSGDAKDLLRKVLVRDPKKRLTAHQVLCHPWLQTIAS APDKPLDSAVLSRLKQFSAMNKLKKMALRVIAENLSEEEIAGLKEMFKMMDTDNSGQINF EELKAGLEKVGANMKESEIYQLMQAADIDNSGTIDYGEFIAATLHLNKIEREDHLFAAFQ YFDKDGSGYITADELQQACDEFGIEDIRLEDMIGEVDQDNDGRIDYNEFVAMMQKPTAGY GKKGHRYNLSIGFRDALKANS

Transcript Sequence

Transcript ID	Zm00001d040996_T005
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:89082393:89084928:-1 gene:Zm00001d040996 gene_biotype:protein_coding transcript_biotype:protein_coding description:Calcium-dependent protein kinase 1
Sequence	ACCCAAACCTCGACCACCAATTTCCATCCTTCCACCTCCGATCGCCTCCCGGCGGAACGT GGTGCGTTCCGCCGTCGCCGCCGCATTGCCATGCCCCTGCAGACTCGGGAGGGCAGGAGG AGGAGGAGGAAACACGAGTACACGGGGTTGTGATCGCCGCCGCGGCCTGCCCGATGGGCA ACGTCTGCGTCGGGCCTCGATTCTCGAAGAACTGTGGCTTCTTCGGCAACTTCTCCCTGT GGCCCTCCCGCTCCCGCAACTCCGGCACCCCCTCCAACCCCACCACCACCTCCCGCTCCG TTCCCGTGGTCCAGGTCCAGCCGAGCGAATCCGACGCCAAGCCGCAGCCCGCGCAGAGCA CCGCGGCTCCGGCACCCGTCGTCATATCCGAGCCGGCACAGCTTTCCCAGCCGCAGGTGG AGTCGGTGCTCCGGCGCAAGACCGACAACCTCAAGGACATGTACAGCCTGGGACGGAAGC TCGGGCAGGGGCAGTTCGGCACCACGTACCTGTGCGTGGACAAGGCGACGGGGCTGGAGT ACGCGTGCAAGTCAATCGCGAAGCGGAAGCTGGTCACCGACGAGGACGTGGAGGACGTCC GGCGCGAGATCCAGATCATGCACCACCTCGCGGGGCACCCCAACATCATCGCCATCCGCG GCGCGTACGAGGACTCCGTGGCCGTGCACGTCGTCATGGAGCTCTGCGCCGGCGGGGAGC TGTTCGACCGCATCGTGCGGAGGGGGCACTACACGGAGCGGCAGGCGGGGGAGCTGGCCC GCGTCATCGTCGCCGTCGTGGAATCGTGCCACTCGCTCGGGGTCATGCACCGGGACCTCA AGCCGGAGAACTTCCTCTTCGTCGGCAACGACGAGGAGTCGCCGCTGAAGACCATCGACT TCGGCCTCTCCATGTTCTTCCGCCCAGGCGAGGAGTTCACGGACGTCGTCGGGAGCCCGT ACTACGTGGCGCCGGAGGTGCTGAAGAAGCGCTACGGGCAGGAGGCCGACGTGTGGAGCG CCGGCGTAATCATCTACATCCTTCTCTGCGGGGTGCCGCCGTTCTGGGCGGAGACGGAGC AGGGCATCTTCGAGCAGGTGCTGCACGGCTCGCTGGACTTCGACTCCGACCCCTGGCCGA GCGTGTCGGGGGACGCCAAGGACCTGCTTCGGAAGGTGCTCGTCAGGGACCCCAAGAAGC GCCTCACCGCGCACCAAGTGCTATGCCACCCGTGGCTGCAGACCATCGCCTCTGCGCCTG ATAAGCCGCTGGACTCTGCGGTGTTGTCCCGGCTGAAGCAGTTCTCGGCGATGAACAAGC TCAAGAAGATGGCGTTGAGGGTGATCGCGGAGAACCTGTCGGAGGAGGAGATCGCGGGGC TCAAGGAGATGTTCAAGATGATGGACACCGACAACAGTGGGCAGATCAATTTCGAGGAGC TCAAGGCCGGACTTGAGAAAGTCGGTGCTAACATGAAGGAGTCCGAGATATATCAGCTCA TGCAAGCTGCGGATATCGACAACAGTGGCACCATAGATTATGGAGAGTTCATAGCTGCCA CACTGCATCTCAACAAAATTGAAAGGGAAGACCATCTCTTTGCCGCCTTCCAATACTTTG ATAAAGACGGCAGTGGATACATCACAGCTGATGAGCTGCAGCAAGCATGTGACGAGTTCG GAATAGAGGATATCAGACTCGAAGACATGATTGGCGAAGTGGATCAAGACAATGATGGGC GCATAGATTACAACGAGTTCGTCGCCATGATGCAAAAACCAACAGCCGGATATGGCAAGA AAGGTCATCGGTATAACCTTAGCATTGGTTTTAGGGATGCTTTGAAGGCAAATAGCTGAC AATGTTGCCCATCATACTAAGTGACGTGGTGTTGTGCATACGTGTTGTAATTGTAAACGG AACTCGGGTTCTGATTAATTCATAGGATCTTTTTTTG