Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d040965_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:3:85292411:85294313:-1 gene:Zm00001d040965 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectin lyase-like superfamily protein
Sequence	ATGGCTGCTTCCACAAACAACACTCTCAGGGTGCTGTTCACCCTAATGGTTGTATGCGCC GCAGTATGCACAGCGAAAAGGACTGTAGCAAAGGCAGGAGACTTGGCGCCAGCCCCTGCT CCGTTAGGAGCAGGAGGCGCCACCGCAGCCCCAGAAGGTGCGGCTAGAGCCAGCAGGACG TTCGACATATCGAAGTTCGGCGCGACCAGCGACGGCAAGACGGACTCGACACAGGCAGTC CAGGACACGTGGACGTCAGCGTGCGGAGCGATGGGAGACGCAACGATGCTCATCCCCAAG GGCGACTACCTGGTGGGCCCTCTCTACTTCAGTGGCCCGTGCATGGGGGACATCACCATC CAGCTCGATGGCATCCTGCTGGGATCCAACGACCTGGCCAAGTACACGGCGAGTTGGATC CAGGTGTCGCACGTTAACAACATCGTCATCAACGGCTCCGGCACGCTCGATGGCCAGGGC ACCGCAGTATATACCAAGAGCAAGACCGACGTCGTCAAGGCGATGCCCAACACACTAGTG TTGTTCTACGTGACCAACGGCACTGTTTCCGGAATTAAACTACTCAACTCCAAATTCTTC CACATCAACATCGACACTTCTAAGGACATCACCGTGAAGGATGTGAACATCACGGCGCCC GCGGACGTCGAGAACACGGACGGCGTCCATGTCGGCGGGTCCTCCAATGTACGCATCACC AACTCGACCATTGGCACCGGCGACGACTGCGTCTCCATCGGCCCCGGGAGCGACGGTGTC ATGGTGAACAACATCACCTGTGGCCCCGGGCAGGGCATCAGTGTGGGCTGCCTAGGCCGC TACAAGGATGAGAAGGACGTGAGCGACGTGACGGTGCGGGATTGCGTGCTTAGGAACACC ACCAACGGCGTGCGCATCAAGTCGTACGAGGATGCCGAGTCTGTGCTCACGGCGTCCCAT CTCACCTTCGAGAACATCAGGATGGAGGAGGTGGCCAACCCCATCATCATCGACCAGTAC TTCTGCCCCCAGAAGGTCTGCCCCGGCAAGCGAAGCAACTCCTCGCATGTCTCCATCAAG AACGTCACCTTCCGCAACATCTCCGGCACGTCGTCCACGCCCGAAGCCGTCAGCCTGCTC TGCTCCGAGACGCAGCCGTGCAGCGGCGTCTCGCTCATCGATGTCAACGTCGAGTACGCC GGCAAGAACAACAAGACCATGGCTGTGTGCAGCAACGCCAAGGGAACCGCCAAGGGAAGC CTCCAGGCCCTGGATTGCCTCGTCTGA

Peptide Sequence

PEP ID	Zm00001d040965_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:3:85292411:85294313:-1 gene:Zm00001d040965 transcript:Zm00001d040965_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectin lyase-like superfamily protein
Sequence	MAASTNNTLRVLFTLMVVCAAVCTAKRTVAKAGDLAPAPAPLGAGGATAAPEGAARASRT FDISKFGATSDGKTDSTQAVQDTWTSACGAMGDATMLIPKGDYLVGPLYFSGPCMGDITI QLDGILLGSNDLAKYTASWIQVSHVNNIVINGSGTLDGQGTAVYTKSKTDVVKAMPNTLV LFYVTNGTVSGIKLLNSKFFHINIDTSKDITVKDVNITAPADVENTDGVHVGGSSNVRIT NSTIGTGDDCVSIGPGSDGVMVNNITCGPGQGISVGCLGRYKDEKDVSDVTVRDCVLRNT TNGVRIKSYEDAESVLTASHLTFENIRMEEVANPIIIDQYFCPQKVCPGKRSNSSHVSIK NVTFRNISGTSSTPEAVSLLCSETQPCSGVSLIDVNVEYAGKNNKTMAVCSNAKGTAKGS LQALDCLV

Transcript Sequence

Transcript ID	Zm00001d040965_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:85292411:85294313:-1 gene:Zm00001d040965 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pectin lyase-like superfamily protein
Sequence	AGGATATCTTCGGGAACATCCATCCATCCCCAATCCCCAAAGGCGAGGAGAGAACTAGCA AAGGGGAAATGGCTGCTTCCACAAACAACACTCTCAGGGTGCTGTTCACCCTAATGGTTG TATGCGCCGCAGTATGCACAGCGAAAAGGACTGTAGCAAAGGCAGGAGACTTGGCGCCAG CCCCTGCTCCGTTAGGAGCAGGAGGCGCCACCGCAGCCCCAGAAGGTGCGGCTAGAGCCA GCAGGACGTTCGACATATCGAAGTTCGGCGCGACCAGCGACGGCAAGACGGACTCGACAC AGGCAGTCCAGGACACGTGGACGTCAGCGTGCGGAGCGATGGGAGACGCAACGATGCTCA TCCCCAAGGGCGACTACCTGGTGGGCCCTCTCTACTTCAGTGGCCCGTGCATGGGGGACA TCACCATCCAGCTCGATGGCATCCTGCTGGGATCCAACGACCTGGCCAAGTACACGGCGA GTTGGATCCAGGTGTCGCACGTTAACAACATCGTCATCAACGGCTCCGGCACGCTCGATG GCCAGGGCACCGCAGTATATACCAAGAGCAAGACCGACGTCGTCAAGGCGATGCCCAACA CACTAGTGTTGTTCTACGTGACCAACGGCACTGTTTCCGGAATTAAACTACTCAACTCCA AATTCTTCCACATCAACATCGACACTTCTAAGGACATCACCGTGAAGGATGTGAACATCA CGGCGCCCGCGGACGTCGAGAACACGGACGGCGTCCATGTCGGCGGGTCCTCCAATGTAC GCATCACCAACTCGACCATTGGCACCGGCGACGACTGCGTCTCCATCGGCCCCGGGAGCG ACGGTGTCATGGTGAACAACATCACCTGTGGCCCCGGGCAGGGCATCAGTGTGGGCTGCC TAGGCCGCTACAAGGATGAGAAGGACGTGAGCGACGTGACGGTGCGGGATTGCGTGCTTA GGAACACCACCAACGGCGTGCGCATCAAGTCGTACGAGGATGCCGAGTCTGTGCTCACGG CGTCCCATCTCACCTTCGAGAACATCAGGATGGAGGAGGTGGCCAACCCCATCATCATCG ACCAGTACTTCTGCCCCCAGAAGGTCTGCCCCGGCAAGCGAAGCAACTCCTCGCATGTCT CCATCAAGAACGTCACCTTCCGCAACATCTCCGGCACGTCGTCCACGCCCGAAGCCGTCA GCCTGCTCTGCTCCGAGACGCAGCCGTGCAGCGGCGTCTCGCTCATCGATGTCAACGTCG AGTACGCCGGCAAGAACAACAAGACCATGGCTGTGTGCAGCAACGCCAAGGGAACCGCCA AGGGAAGCCTCCAGGCCCTGGATTGCCTCGTCTGATCGATGACCTTGCATTTGCATGCAT TCTTCTTCCGTTTCACTTTTCCATATTCTATTGCGTTCCAGCCAAGCATCTTGTTTCTTT TATATATATATATATATATATATATATATATATATATATATATATATATATATATATATA TATATATATATATGCAGGCAATTATATTAATGGTGGAGACGACACATATATCTGGGCGTT TGTCTGCCTTCCCAGCTGGTTTAGAGCACTGTAATATTATTAGATATAACAGGGCGTTAT GTTGTATTTTTACATCACTATACCTTACCATGAGGTCCTTTCTCCTCTGTGAGGGGTCAG GCATTGTATTGGAACCTTGTACGGCGTTTGCCTTTTTAATGCAATGACATACACTACTCG CACC