Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d040880_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:3:74906493:74908019:1 gene:Zm00001d040880 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ATPA description:ATP synthase subunit 1
Sequence	ATGGAATTCTCACCAAGAGCTGCGGAACTCACGACTCTATTAGAAAGTAGAATGATCAAC TTTTACACGAATTTGAAAGTGGATGAGATCGGTCGAGTGGTCTCAGTTGGAGATGGGATT GCACGAGTTTACGGATTGAACGAGATTCAAGCAGGAGAAATGGTGGAATTTGCCAGCGGT GTGAAAGGAATAGCCTTGAATCTTGAGAATGAGAATGTAGGTATTGTTGTCTTTGGTAGT GATACCGCTATTAAAGAAGGAGATCTTGTCAAGCGCACTGGATCTATTGTGGATGTTCCT GCGGGAAAGGCCATGTTAGGCCGTGTGGTCGACGCCTTGGGAGTACCTATTGATGGAAAA GGGGCTCTAAGCGATCACGAACGAAGACGTGTCGAAGTGAAAGCCCCAGGGATTATTGAA CGTAAATCTGTCCACGAACCTATGCAAACAGGCTTAAAAGCAGTGGATAGCCTGGTTCCT ATAGGCCGTGGTCAACGAGAACTTATAATCGGGGACAGACAAACTGGAAAAACAGCAATA GCTATCGATACTATATTAAACCAAAAGCAAATGAACTCAAGGGGCACAAATGAGAGTGAG ACATTGTATTGTGTCTATGTTGCGATTGGACAAAAACGCTCGACTGTGGCACAATTAGTT CAAATTCTGTCAGAAGCGAATGCTTTGGAATATTCCATGCTTGTAGCAGCCACCGCTTCG GATCCAGCTCCTCTGCAATTTCTGGCCCCATATTCTGGGTGTGCCATGGGGGAATATTTC CGCGATAATGGAATGCATGCATTAATTATATATGATGATCTAAGTAAACAGGCGGTGGCA TATCGACAAATGTCATTATTGTTACGCCGACCACCAGGCCGTGAGGCTTTCCCCGGGGAT GTTTTCTATTTACATTCCCGTCTCTTAGAAAGAGCCGCTAAACGATCGGACCAGACAGGT GCAGGTAGCTTGACTGCGTTACCCGTGATTGAAACACAAGCTGGAGACGTATCGGCCTAT ATCCCCACCAATGTGATCTCCATTACAGATGGACAAATCTGTTTGGAAACAGAGCTCTTT TATCGCGGAATTAGACCAGCTATTAACGTTGGCTTATCCGTCAGTCGCGTCGGGTCCGCC GCTCAGTTGAAAGCTATGAAACAAGTCTGCGGTAGTTCAAAACTGGAATTGGCACAATAT CGCGAAGTGGCCGCCTTCGCTCAATTTGGGTCAGACCTTGATGCTGCGACTCAGGCATTA CTCAATAGAGGTGCAAGGCTTACAGAAGTGCCCAAACAACCACAATATGAGCCACTTCCA ATTGAAAAACAAATTGTTGTTATTTATGCTGCTGTCAACGGCTTCTGTGATCGAATGCCA CTAGACAGAATTTCTCAATATGAAAAAAACATTCTAAGTACTATTAATCCTGAATTACTA AAATCCTTCTTAGAAAAAGGTGGCTTAACTAACGAAAGAAAGATGGAACCTGATGCTTCT TTAAAAGAAAGCGCTTTAAATTTATGA

Peptide Sequence

PEP ID	Zm00001d040880_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:3:74906493:74908019:1 gene:Zm00001d040880 transcript:Zm00001d040880_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ATPA description:ATP synthase subunit 1
Sequence	MEFSPRAAELTTLLESRMINFYTNLKVDEIGRVVSVGDGIARVYGLNEIQAGEMVEFASG VKGIALNLENENVGIVVFGSDTAIKEGDLVKRTGSIVDVPAGKAMLGRVVDALGVPIDGK GALSDHERRRVEVKAPGIIERKSVHEPMQTGLKAVDSLVPIGRGQRELIIGDRQTGKTAI AIDTILNQKQMNSRGTNESETLYCVYVAIGQKRSTVAQLVQILSEANALEYSMLVAATAS DPAPLQFLAPYSGCAMGEYFRDNGMHALIIYDDLSKQAVAYRQMSLLLRRPPGREAFPGD VFYLHSRLLERAAKRSDQTGAGSLTALPVIETQAGDVSAYIPTNVISITDGQICLETELF YRGIRPAINVGLSVSRVGSAAQLKAMKQVCGSSKLELAQYREVAAFAQFGSDLDAATQAL LNRGARLTEVPKQPQYEPLPIEKQIVVIYAAVNGFCDRMPLDRISQYEKNILSTINPELL KSFLEKGGLTNERKMEPDASLKESALNL

Transcript Sequence

Transcript ID	Zm00001d040880_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:74906493:74908019:1 gene:Zm00001d040880 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ATPA description:ATP synthase subunit 1
Sequence	ATGGAATTCTCACCAAGAGCTGCGGAACTCACGACTCTATTAGAAAGTAGAATGATCAAC TTTTACACGAATTTGAAAGTGGATGAGATCGGTCGAGTGGTCTCAGTTGGAGATGGGATT GCACGAGTTTACGGATTGAACGAGATTCAAGCAGGAGAAATGGTGGAATTTGCCAGCGGT GTGAAAGGAATAGCCTTGAATCTTGAGAATGAGAATGTAGGTATTGTTGTCTTTGGTAGT GATACCGCTATTAAAGAAGGAGATCTTGTCAAGCGCACTGGATCTATTGTGGATGTTCCT GCGGGAAAGGCCATGTTAGGCCGTGTGGTCGACGCCTTGGGAGTACCTATTGATGGAAAA GGGGCTCTAAGCGATCACGAACGAAGACGTGTCGAAGTGAAAGCCCCAGGGATTATTGAA CGTAAATCTGTCCACGAACCTATGCAAACAGGCTTAAAAGCAGTGGATAGCCTGGTTCCT ATAGGCCGTGGTCAACGAGAACTTATAATCGGGGACAGACAAACTGGAAAAACAGCAATA GCTATCGATACTATATTAAACCAAAAGCAAATGAACTCAAGGGGCACAAATGAGAGTGAG ACATTGTATTGTGTCTATGTTGCGATTGGACAAAAACGCTCGACTGTGGCACAATTAGTT CAAATTCTGTCAGAAGCGAATGCTTTGGAATATTCCATGCTTGTAGCAGCCACCGCTTCG GATCCAGCTCCTCTGCAATTTCTGGCCCCATATTCTGGGTGTGCCATGGGGGAATATTTC CGCGATAATGGAATGCATGCATTAATTATATATGATGATCTAAGTAAACAGGCGGTGGCA TATCGACAAATGTCATTATTGTTACGCCGACCACCAGGCCGTGAGGCTTTCCCCGGGGAT GTTTTCTATTTACATTCCCGTCTCTTAGAAAGAGCCGCTAAACGATCGGACCAGACAGGT GCAGGTAGCTTGACTGCGTTACCCGTGATTGAAACACAAGCTGGAGACGTATCGGCCTAT ATCCCCACCAATGTGATCTCCATTACAGATGGACAAATCTGTTTGGAAACAGAGCTCTTT TATCGCGGAATTAGACCAGCTATTAACGTTGGCTTATCCGTCAGTCGCGTCGGGTCCGCC GCTCAGTTGAAAGCTATGAAACAAGTCTGCGGTAGTTCAAAACTGGAATTGGCACAATAT CGCGAAGTGGCCGCCTTCGCTCAATTTGGGTCAGACCTTGATGCTGCGACTCAGGCATTA CTCAATAGAGGTGCAAGGCTTACAGAAGTGCCCAAACAACCACAATATGAGCCACTTCCA ATTGAAAAACAAATTGTTGTTATTTATGCTGCTGTCAACGGCTTCTGTGATCGAATGCCA CTAGACAGAATTTCTCAATATGAAAAAAACATTCTAAGTACTATTAATCCTGAATTACTA AAATCCTTCTTAGAAAAAGGTGGCTTAACTAACGAAAGAAAGATGGAACCTGATGCTTCT TTAAAAGAAAGCGCTTTAAATTTATGA