Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d040850_T006
CDS Infomation	cds chromosome:B73_RefGen_v4:3:71572023:71601456:1 gene:Zm00001d040850 gene_biotype:protein_coding transcript_biotype:protein_coding description:Shikimate biosynthesis protein aroDE
Sequence	ATGACGCTGTTGTGCGTGCCGCTGGTGGGGCGGACGGTGGAGGAGATGATTACAGACGCG GCGGCGGCCGCCGCCACCGGCGGCGACATGGTCGAGATCCGGCTTGACTTCATCCAGGGG TTCCGCCCGCGTGAGCACCTACCGCCCCTGCTCCGCGGCTGCCCACTCCCGGCCCTCGTC ACCTATCGACCTGTCTGGGAAGGAGGCCAATATGAAGGTGATGACACCACAAGATTTGAG ACACTACGTTTAGCAATGGAATTAGGTGTAGACTATGTTGATATTGAATTGAAGGTTGCA GACAAATTTATGAGCTTTATTGCTGGCCATAAGCCAGAGAAATGTAAACTTATTGTTTCT TCACATAATTATGAATATACTCCATCATGTGAGGAAATTACAAATCTTGTCGCTAGTATA CAAGCAGTTGGAGCTGATATAGTGAAAGTTGCAACAACCGCCAAGGACATTGTCGATGTA TCACGGATGTTCCAAGTGATGGTACACTGCCAAGTGCCTATGATTGGACTCGTAATGAGT GAAAAAGGTTTAATGTCAAGAGTGTTAGCGCCCAAGTTTGGTGGATATCTTACATTTGGG ATACTGAATGCTACAAAGACATCAGCTTCTGGACAACCAACAGTTGAGGACTTACTGGAC ATTTACAACATAAAGTGTATTGGGCCTGATACAAAGATTCTTGGTCTTATAGCCAACCCA GTAAAACAGAGCAAGAGCCCAATTTTACACAATAAATGTCTTCAGTCCATTGGATATAAT GCTGTTTATCTTCCACTTCTTGGAGATAATCTTGCTAGTTTTCTGGAGACATACTCATCT CCTGACTTTTCAGGATTTAGTTGCTCACTTCCTTTCAAAGTAGATGCTGTACAGTGTTGT GATGAACATGATCCAGTTGCTAAGTCAATAGGAGCCATAAACACTATAATTAGAAGACCA GATGGCAAATTAGTGGGGTACAATACGGACTACATTGGAGCTATATCTGCTATTGAGGAT GGCATTGGAGGTCCAGGGTCAAAGGATGCTGTCATCTCACCATTGGCTGGTAGGCTTATT GTTGTTGTAGGAGCTGGGGGTGCTGGTAAGGCAATTGCTTATGGGGCAAAGGAGAAGGGT GCGAGGGTAGTTATAGCAAATCGCACCTATGAGAAGGCTGTACGTCTTGCCAATGCAATT GGTGGTCAGGCCCTGAGATTAGAAGACCTGGAAACTTTCAGACCTGAAGAAGGGATGATC CTTGCTAATGCAACATCATTGGGGATGTACCCAAATGTTGATGGTACTCCTATTCCAAAG GTGTCCACACACCTTTCCTTCTCTTTCACACATACATAA

Peptide Sequence

PEP ID	Zm00001d040850_P006
PEP Infomation	pep chromosome:B73_RefGen_v4:3:71572023:71601456:1 gene:Zm00001d040850 transcript:Zm00001d040850_T006 gene_biotype:protein_coding transcript_biotype:protein_coding description:Shikimate biosynthesis protein aroDE
Sequence	MTLLCVPLVGRTVEEMITDAAAAAATGGDMVEIRLDFIQGFRPREHLPPLLRGCPLPALV TYRPVWEGGQYEGDDTTRFETLRLAMELGVDYVDIELKVADKFMSFIAGHKPEKCKLIVS SHNYEYTPSCEEITNLVASIQAVGADIVKVATTAKDIVDVSRMFQVMVHCQVPMIGLVMS EKGLMSRVLAPKFGGYLTFGILNATKTSASGQPTVEDLLDIYNIKCIGPDTKILGLIANP VKQSKSPILHNKCLQSIGYNAVYLPLLGDNLASFLETYSSPDFSGFSCSLPFKVDAVQCC DEHDPVAKSIGAINTIIRRPDGKLVGYNTDYIGAISAIEDGIGGPGSKDAVISPLAGRLI VVVGAGGAGKAIAYGAKEKGARVVIANRTYEKAVRLANAIGGQALRLEDLETFRPEEGMI LANATSLGMYPNVDGTPIPKVSTHLSFSFTHT

Transcript Sequence

Transcript ID	Zm00001d040850_T006
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:71572023:71601456:1 gene:Zm00001d040850 gene_biotype:protein_coding transcript_biotype:protein_coding description:Shikimate biosynthesis protein aroDE
Sequence	TCCTCCACTTGCCCTTCTCCGCCAACAGACTGTCCCCGGCCGCTGCCATTGCCGATTGCT CACATCCGCGTTCGTGTTCGCATCCGCATCAGGGTCACCTGCGCCGGCGAGCCATTTGAA AGGGAGGAGTAGCAGACTCTCAGAGGTGGACATGACGCTGTTGTGCGTGCCGCTGGTGGG GCGGACGGTGGAGGAGATGATTACAGACGCGGCGGCGGCCGCCGCCACCGGCGGCGACAT GGTCGAGATCCGGCTTGACTTCATCCAGGGGTTCCGCCCGCGTGAGCACCTACCGCCCCT GCTCCGCGGCTGCCCACTCCCGGCCCTCGTCACCTATCGACCTGTCTGGGAAGGAGGCCA ATATGAAGGTGATGACACCACAAGATTTGAGACACTACGTTTAGCAATGGAATTAGGTGT AGACTATGTTGATATTGAATTGAAGGTTGCAGACAAATTTATGAGCTTTATTGCTGGCCA TAAGCCAGAGAAATGTAAACTTATTGTTTCTTCACATAATTATGAATATACTCCATCATG TGAGGAAATTACAAATCTTGTCGCTAGTATACAAGCAGTTGGAGCTGATATAGTGAAAGT TGCAACAACCGCCAAGGACATTGTCGATGTATCACGGATGTTCCAAGTGATGGTACACTG CCAAGTGCCTATGATTGGACTCGTAATGAGTGAAAAAGGTTTAATGTCAAGAGTGTTAGC GCCCAAGTTTGGTGGATATCTTACATTTGGGATACTGAATGCTACAAAGACATCAGCTTC TGGACAACCAACAGTTGAGGACTTACTGGACATTTACAACATAAAGTGTATTGGGCCTGA TACAAAGATTCTTGGTCTTATAGCCAACCCAGTAAAACAGAGCAAGAGCCCAATTTTACA CAATAAATGTCTTCAGTCCATTGGATATAATGCTGTTTATCTTCCACTTCTTGGAGATAA TCTTGCTAGTTTTCTGGAGACATACTCATCTCCTGACTTTTCAGGATTTAGTTGCTCACT TCCTTTCAAAGTAGATGCTGTACAGTGTTGTGATGAACATGATCCAGTTGCTAAGTCAAT AGGAGCCATAAACACTATAATTAGAAGACCAGATGGCAAATTAGTGGGGTACAATACGGA CTACATTGGAGCTATATCTGCTATTGAGGATGGCATTGGAGGTCCAGGGTCAAAGGATGC TGTCATCTCACCATTGGCTGGTAGGCTTATTGTTGTTGTAGGAGCTGGGGGTGCTGGTAA GGCAATTGCTTATGGGGCAAAGGAGAAGGGTGCGAGGGTAGTTATAGCAAATCGCACCTA TGAGAAGGCTGTACGTCTTGCCAATGCAATTGGTGGTCAGGCCCTGAGATTAGAAGACCT GGAAACTTTCAGACCTGAAGAAGGGATGATCCTTGCTAATGCAACATCATTGGGGATGTA CCCAAATGTTGATGGTACTCCTATTCCAAAGGTGTCCACACACCTTTCCTTCTCTTTCAC ACATACATAATTGGAGACTGTTTTTTTAATCTAAAAATGGTTGATCTTTGAGATCTGATG TTTTTCTTGTCCGTGTTTGTCTTACAAGAATAAATAGTAATAGCCTTCCATTATAAATAG TAATATCCTCTGAATGCATAAATCATGAATGGTAACTGCAAACATAAAATTCTTCTTGCT AATCTTATCAAGAACTCAAGATCATTTAAATTTAGTTGGAGGAATTTTTTAGAGAGAACC CGTGAGGAAAACATTGCAAATACATCTAATGAAGCAGGTGCAGTAACCTAGTAACAAATC TGAATAACAGATTGTTTTATCTAAAGGTCTGAGTTTGTGTAACATGCAATCTATGCTTAT ACTGTTTTCACATAAGTTAGGACCTTGTTTATTCTTCCTCCCTTACTCCAAAATTGACAC AAACATTACTACATTAGTACAACTTGATGCCGAAGTGTGTTTGATCATACAGAAAGCCTT GGGTTTCTATGATGTGGTATTTGATGCCGTATATGCCCCAAAAGTTACTCGGCTTCTTCG AGAAGCAGAAGAATGTGGAGTTAAAGTTGTTAGTGGTGTGGAAATGTTTATTAGACAAGC CATGGGTCAATTTGAGCATTTCACCGGTGGTATAGAAGCTCCTGAAAGCCTGATGCGTGA GATAGCAGCAAAATACACCTAGCAGGTTCATTTATCTGTTACCATTTCATTTAAATCTTG CAATTATTGCGGTATAAAACTTCACATGGAAGATGTCAATGTGTGATTTTAGTAGGAACA GGGTATATTTATCTACATTCTGTTAGTTCATTGTTCTCCTTGAAGTAAAGGTCACATTTC ATGTCACAAGTACACCATGCATACGTGCATACACTGAAACGTGACACTGACTCGAACTTA AATAGGTGTAATTGAAGACTCTCAAGGCTATGGACCAGTACTACTTAGAGGCTGTTTGTT TCCGCGTTTTAGCCATCCTTTCACAGCGTAAATAGATAACAATGTTTCCTGTTTGGTACG GCCAGAACGCACGCTATCTACTCCCTTCGCAGGCTGCACCGCTGACCAAACAAGTTTTTG GTATCTCTTGCACTGCAACTGTTGGCGCTGTAATTGATTCCATCACCATTGACGTTGCTA GTGCTGGACCAAACAGCACCTTAGGTGCCGTTTGGTTCACGAATGTAACGTAAATGGTAA CGGTAACGATTCACACTCGAATACCGGCGGTAACAAATTTGAATAAGGCGATATCTATTT GTAGTATGGTATCGATTACGGTTGAACTTAAACAAACATGATTTAACATTATTAGTTACT CATCAATACGTTACCAATATGTGAAACAAACGGCACCTTAGTGCCTTTTTTTTGCCTTTT GTTGAATGTGCTACTCCCTCTGTCCCAAAATAAAATTTGTTTTAGGGAAATAGTAAGATT CATGTAATAGTTAATGTATGTGTTTTATATATGTGTCTAGGTTCATCATCACCTATTTGA ATAGATATAAAAACCAAGAGCTAAAACAACTACTCCCTCTATTCTTTTTTTTGTCGTCGT TTAGTTAAAAATAAACTAGCGGACGACAGATATTCAAGAACGGAGGTAGTATTATTTTAG AATAGAGGAGGGAGTACATTATATGTGTTGTGCCATGACACTTCATTACGAACTCTGATC ATTTCATAAATTTCTGTATCGATATTTAGTTTGCCCCATTGAAAATAGTATGCGCAAGAT CAGTGGTAGCTTCGGGAAAAAAAATATTTCTTGTGTCCTAAATTCAGTATTGGTTATGAC AGTTGGATGTGACAGCGTTTTATTCTGTTTTCAGGCTAATGGCGAAAACCTATCTTTGAT GAATATTTGCCCAAAGATTTTCTCGGGCTGAGTGAATAAATGTTTTGCAGTTATCATGTT TGCTGTTATGTTAGATTTAGCCGACTTGTCACCTGCACACTGTAAGATTATGTTGCCATG CTATAGTGTTCTTGTACCTGCAATAGAAGAGTTGCAAGAATAAAGAGTCAGCTTAGAACC AACGTTATGATGACCAAGGGGGAAAATATGCATCAAACAATGATTCAGTTGGCAGTTGGT TCAGTGCTGATCATGGCGGTTATACTGTCCTGCATAATTTCATTGTACGGTTCCGATGGC ATATTTCTTTTTTTGGAAAAAGGAAAATTTATTGATAACTCAGAATAATATCAAGATTAT ACTGT