Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d040831_T041
CDS Infomation	cds chromosome:B73_RefGen_v4:3:68534880:68545191:-1 gene:Zm00001d040831 gene_biotype:protein_coding transcript_biotype:protein_coding description:ISWI chromatin-remodeling complex ATPase CHR11
Sequence	ATGGCGAAGCCGGTGAAGTATGACGACGAGGAGGAGATCTCCTCCTCCTCCGCCGAGGAG GACGATGACCAGTCCGCCGCCGCCGCCTCCGGATCTGGTGAGGAAGGGGATGACGATGAG GAGGATGCTGCGGCGCTGCCCACGGAGGAGGAGGAAGCTGAGGGCGAGGGGCAGCAAGAG GAGGAGGTCGACGAGGAAGAGATCGAAGCCGTCACTACCGGCGCTGGAGCTGAGGACGGA GAGGACGCCAGTGCCGCTACCGCCGCTGAAGGCGAAGAGGAGTCCCAGTCCACCGAGGAC GACGAATCCGTCGCAAGGGACAAGGACAACGGCGACGAGACTGATGCAGTGGTTGGGAAG CGTGAGAAAACAAGGCTAAAAGAACTCCAGAAGATGAAGAAGCAGAAAATCCAGGAAATA CTGGATACTCAAAACGCTGCCATTGATGCTGACATGAACAATAAAGGGAAGGGACGGTTG AAATACCTTCTTCAGCAGACAGAAATATTTGCTCACTTTGCAAAAGGAAGTCAGTCGAAT GAGAAAAAGCCTCGTGGGAGGGGACGTCATGCATCAAAGATGACTGAAGAAGAGGAAGAC GAAGAATACCTCAAAGAGGAAGAAGATGCCCTTGCTGGTGCAGGGGGTACACGTTTAGTT TCACAGCCTTCATGCATCAAGGGAAAGATGCGTGATTACCAGTTGGCTGGACTTAATTGG CTTATACGATTGTATGAGAATGGTATCAATGGGATATTAGCTGATGAGATGGGTCTTGGG AAAACACTTCAAACTATTTCATTGCTGGGCTATCTGCATGAGTTCAGAGGTATAGCTGGT CCTCACATGGTTGTTGCGCCAAAGTCCACTCTTGGCAACTGGATGAAGGAAATCCAACGT TTTTGCCCTATCTTACGTGCCGTGAAGTTTTTGGGGAACCCAGAAGAGCGGAACCATATA AGGGACAATTTGCTGCAACCTGGGAAATTTGATGTGTGTGTGACTAGTTTTGAAATGGCA ATCAAAGAAAAATCTGCGTTGAGGCGCTTCAGCTGGCGCTACATAATCATTGATGAAGCT CACCGGATAAAAAATGAAAATTCTCTTCTATCAAAGACTATGAGGATTTACAACACTAAT TATCGTCTCCTCATCACAGGCACTCCACTCCAGAATAATCTCCATGAGCTCTGGGCTCTC CTCAATTTCTTGCTACCTGAAATATTTAGCTCTGCGGAGACCTTTGATGAATGGTTTCAA ATATCTGGGGAAAATGATCAACAGGAGGTGGTGCAGCAGCTTCATAAGGTTCTTCGCCCA TTCCTTCTTAGGAGGCTCAAGTCTGATGTAGAAAAGGGCCTACCTCCAAAGAAAGAAACA ATTCTTAAAGTTGGAATGTCTCAGATGCAAAAGCAGTACTATCGTGCTCTGCTTCAGAAG GATTTGGAGGTTATTAATGCTGGTGGTGAACGCAAGCGATTGCTTAACATTGCCATGCAG TTGCGCAAGTGCTGCAACCATCCATATTTATTCCAAGGAGCTGAACCTGGGCCACCCTAC ACAACTGGTGAACATCTAATTGAGAATGCAGGAAAAATGGTTCTACTTGATAAATTGCTG CCCAAGCTAAAGGAGCGTGATTCCAGAGTCCTTATTTTTTCACAGATGACCAGGCTTTTG GATATCTTGGAAGATTATCTTATGTATAGGGGATATCAGTATTGTCGAATTGATGGAAAT ACAGGTGGAGAAGATCGTGATGCATCCATTGAAGCCTTCAATAGTCCAGGAAGTGAGAAG TTTGTTTTCTTACTTTCAACTAGGGCAGGTGGCCTTGGTATCAACTTGGCCACTGCTGAT GTTGTGGTTCTCTATGACAGCGATTGGAATCCCCAAGCTGATCTGCAAGCTCAGGACCGT GCACATAGAATAGGTCAAAAGAAAGAAGTTCAAGTGTTCCGCTTTTGCACTGAGTACACT ATTGAGGAAAAGGTGATTGAGAGAGCATATAAGAAGCTAGCATTGGATGCTTTGGTTATT CAGCAAGGACGATTGGCAGAGCAGAAAACTGTCAATAAGGATGATCTTCTGCAAATGGTG CGGTTTGGTGCTGAAATGGTTTTCAGTTCTAAGGACAGCACAATAACTGATGAGGACATT GACCGTATTATAGCTAAAGGAGAGGAGACAACAGCAGAACTTGATGCGAAAATGAAAAAG TTCACTGAGGATGCCATCAAATTTAAGATGGATGATAATGCTGAATTGTATGACTTCGAT GATGAGAAGGATGAAAACAAGGTTGATTTCAAGAAACTTGTTAGTGATAACTGGATTGAG CCACCTAGAAGAGAAAGGAAGAGAAACTACTCTGAGTCTGACTACTTTAAGCAAGCACTT CGCCAAGGTGCACCAGCAAAGCCTAGGGAACCAAGGATTCCAAGAATGCCGCACTTACAT GATTTCCAGTTTTTCAATAACCAAAGGCTAAATGAATTGTATGAAAAGGAAGTGCGGTAC CTTATGCAAGCGAACCAGAAGAAAGATACCATTGATGGTGAAGACGAAGATCAGTTGGAG CCTTTGACAGCAGAGGAGCAGGAAGAGAAGGAACAATTATTAGAGGAGGGTTTTGCGTCA TGGACAAGGAGAGACTTCAACACATTTATTCGTGCATGTGAGAAATATGGTCGCAATGAT ATTAAAAGTATATCATCTGAAATGGAGGGTAAGACAGAAGAGGAAGTTCAACGTTATGCT AGAGTTTTCAAGGAGAGATACAAGGAACTGAGTGATTATGATAGAATTATAAAAAATATT GAAAGGGGGGAAGCAAGGATATCCCGCAAGGATGAGATTATGAAGGCTATTGGGAAGAAG CTAGACCGCTACAAGAACCCATGGTTAGAGTTGAAAATTCAGTACGGCCAAAATAAAGGG AAGTTCTATAACGAGGAATGTGACCGCTTTATGCTTTGCATGGTGCACAAACTTGGATAT GGAAACTGGGATGAACTGAAAGCTGCCTTCCGTATGTCTCCCTTGTTTCGATTTGATTGG TTTGTGAAGTCCAGAACTACCCAAGAGTTGGCTAGGCGGTGTGATACCCTTATCCGACTG GTTGAGAAAGAAAATCAAGAATATGATGAGCAAGAGAGGCAAGCAAGGAAGGAGAAAAGG CTTGCTAAGAACATGACTCCAACAAAGCGAGCTGCACTAAAGAATTCAGAGGGTGAGAAT ACTCCACCGAGTTCATTCAAGAGACGACGGCAGTCCCTTATGGACGACTATGTGGGCTCG GTA

Peptide Sequence

PEP ID	Zm00001d040831_P041
PEP Infomation	pep chromosome:B73_RefGen_v4:3:68534880:68545191:-1 gene:Zm00001d040831 transcript:Zm00001d040831_T041 gene_biotype:protein_coding transcript_biotype:protein_coding description:ISWI chromatin-remodeling complex ATPase CHR11
Sequence	MAKPVKYDDEEEISSSSAEEDDDQSAAAASGSGEEGDDDEEDAAALPTEEEEAEGEGQQE EEVDEEEIEAVTTGAGAEDGEDASAATAAEGEEESQSTEDDESVARDKDNGDETDAVVGK REKTRLKELQKMKKQKIQEILDTQNAAIDADMNNKGKGRLKYLLQQTEIFAHFAKGSQSN EKKPRGRGRHASKMTEEEEDEEYLKEEEDALAGAGGTRLVSQPSCIKGKMRDYQLAGLNW LIRLYENGINGILADEMGLGKTLQTISLLGYLHEFRGIAGPHMVVAPKSTLGNWMKEIQR FCPILRAVKFLGNPEERNHIRDNLLQPGKFDVCVTSFEMAIKEKSALRRFSWRYIIIDEA HRIKNENSLLSKTMRIYNTNYRLLITGTPLQNNLHELWALLNFLLPEIFSSAETFDEWFQ ISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYRALLQK DLEVINAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGEHLIENAGKMVLLDKLL PKLKERDSRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGEDRDASIEAFNSPGSEK FVFLLSTRAGGLGINLATADVVVLYDSDWNPQADLQAQDRAHRIGQKKEVQVFRFCTEYT IEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDDLLQMVRFGAEMVFSSKDSTITDEDI DRIIAKGEETTAELDAKMKKFTEDAIKFKMDDNAELYDFDDEKDENKVDFKKLVSDNWIE PPRRERKRNYSESDYFKQALRQGAPAKPREPRIPRMPHLHDFQFFNNQRLNELYEKEVRY LMQANQKKDTIDGEDEDQLEPLTAEEQEEKEQLLEEGFASWTRRDFNTFIRACEKYGRND IKSISSEMEGKTEEEVQRYARVFKERYKELSDYDRIIKNIERGEARISRKDEIMKAIGKK LDRYKNPWLELKIQYGQNKGKFYNEECDRFMLCMVHKLGYGNWDELKAAFRMSPLFRFDW FVKSRTTQELARRCDTLIRLVEKENQEYDEQERQARKEKRLAKNMTPTKRAALKNSEGEN TPPSSFKRRRQSLMDDYVGSV

Transcript Sequence

Transcript ID	Zm00001d040831_T041
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:68534880:68545191:-1 gene:Zm00001d040831 gene_biotype:protein_coding transcript_biotype:protein_coding description:ISWI chromatin-remodeling complex ATPase CHR11
Sequence	CTCCGCACTCGAAATCCAAAGCGCCCCGCCCCGACCCGAACCCTAATCCTGCATTTCCTT TCCCGCCACCGCCCGCCCCAATGGCGAAGCCGGTGAAGTATGACGACGAGGAGGAGATCT CCTCCTCCTCCGCCGAGGAGGACGATGACCAGTCCGCCGCCGCCGCCTCCGGATCTGGTG AGGAAGGGGATGACGATGAGGAGGATGCTGCGGCGCTGCCCACGGAGGAGGAGGAAGCTG AGGGCGAGGGGCAGCAAGAGGAGGAGGTCGACGAGGAAGAGATCGAAGCCGTCACTACCG GCGCTGGAGCTGAGGACGGAGAGGACGCCAGTGCCGCTACCGCCGCTGAAGGCGAAGAGG AGTCCCAGTCCACCGAGGACGACGAATCCGTCGCAAGGGACAAGGACAACGGCGACGAGA CTGATGCAGTGGTTGGGAAGCGTGAGAAAACAAGGCTAAAAGAACTCCAGAAGATGAAGA AGCAGAAAATCCAGGAAATACTGGATACTCAAAACGCTGCCATTGATGCTGACATGAACA ATAAAGGGAAGGGACGGTTGAAATACCTTCTTCAGCAGACAGAAATATTTGCTCACTTTG CAAAAGGAAGTCAGTCGAATGAGAAAAAGCCTCGTGGGAGGGGACGTCATGCATCAAAGA TGACTGAAGAAGAGGAAGACGAAGAATACCTCAAAGAGGAAGAAGATGCCCTTGCTGGTG CAGGGGGTACACGTTTAGTTTCACAGCCTTCATGCATCAAGGGAAAGATGCGTGATTACC AGTTGGCTGGACTTAATTGGCTTATACGATTGTATGAGAATGGTATCAATGGGATATTAG CTGATGAGATGGGTCTTGGGAAAACACTTCAAACTATTTCATTGCTGGGCTATCTGCATG AGTTCAGAGGTATAGCTGGTCCTCACATGGTTGTTGCGCCAAAGTCCACTCTTGGCAACT GGATGAAGGAAATCCAACGTTTTTGCCCTATCTTACGTGCCGTGAAGTTTTTGGGGAACC CAGAAGAGCGGAACCATATAAGGGACAATTTGCTGCAACCTGGGAAATTTGATGTGTGTG TGACTAGTTTTGAAATGGCAATCAAAGAAAAATCTGCGTTGAGGCGCTTCAGCTGGCGCT ACATAATCATTGATGAAGCTCACCGGATAAAAAATGAAAATTCTCTTCTATCAAAGACTA TGAGGATTTACAACACTAATTATCGTCTCCTCATCACAGGCACTCCACTCCAGAATAATC TCCATGAGCTCTGGGCTCTCCTCAATTTCTTGCTACCTGAAATATTTAGCTCTGCGGAGA CCTTTGATGAATGGTTTCAAATATCTGGGGAAAATGATCAACAGGAGGTGGTGCAGCAGC TTCATAAGGTTCTTCGCCCATTCCTTCTTAGGAGGCTCAAGTCTGATGTAGAAAAGGGCC TACCTCCAAAGAAAGAAACAATTCTTAAAGTTGGAATGTCTCAGATGCAAAAGCAGTACT ATCGTGCTCTGCTTCAGAAGGATTTGGAGGTTATTAATGCTGGTGGTGAACGCAAGCGAT TGCTTAACATTGCCATGCAGTTGCGCAAGTGCTGCAACCATCCATATTTATTCCAAGGAG CTGAACCTGGGCCACCCTACACAACTGGTGAACATCTAATTGAGAATGCAGGAAAAATGG TTCTACTTGATAAATTGCTGCCCAAGCTAAAGGAGCGTGATTCCAGAGTCCTTATTTTTT CACAGATGACCAGGCTTTTGGATATCTTGGAAGATTATCTTATGTATAGGGGATATCAGT ATTGTCGAATTGATGGAAATACAGGTGGAGAAGATCGTGATGCATCCATTGAAGCCTTCA ATAGTCCAGGAAGTGAGAAGTTTGTTTTCTTACTTTCAACTAGGGCAGGTGGCCTTGGTA TCAACTTGGCCACTGCTGATGTTGTGGTTCTCTATGACAGCGATTGGAATCCCCAAGCTG ATCTGCAAGCTCAGGACCGTGCACATAGAATAGGTCAAAAGAAAGAAGTTCAAGTGTTCC GCTTTTGCACTGAGTACACTATTGAGGAAAAGGTGATTGAGAGAGCATATAAGAAGCTAG CATTGGATGCTTTGGTTATTCAGCAAGGACGATTGGCAGAGCAGAAAACTGTCAATAAGG ATGATCTTCTGCAAATGGTGCGGTTTGGTGCTGAAATGGTTTTCAGTTCTAAGGACAGCA CAATAACTGATGAGGACATTGACCGTATTATAGCTAAAGGAGAGGAGACAACAGCAGAAC TTGATGCGAAAATGAAAAAGTTCACTGAGGATGCCATCAAATTTAAGATGGATGATAATG CTGAATTGTATGACTTCGATGATGAGAAGGATGAAAACAAGGTTGATTTCAAGAAACTTG TTAGTGATAACTGGATTGAGCCACCTAGAAGAGAAAGGAAGAGAAACTACTCTGAGTCTG ACTACTTTAAGCAAGCACTTCGCCAAGGTGCACCAGCAAAGCCTAGGGAACCAAGGATTC CAAGAATGCCGCACTTACATGATTTCCAGTTTTTCAATAACCAAAGGCTAAATGAATTGT ATGAAAAGGAAGTGCGGTACCTTATGCAAGCGAACCAGAAGAAAGATACCATTGATGGTG AAGACGAAGATCAGTTGGAGCCTTTGACAGCAGAGGAGCAGGAAGAGAAGGAACAATTAT TAGAGGAGGGTTTTGCGTCATGGACAAGGAGAGACTTCAACACATTTATTCGTGCATGTG AGAAATATGGTCGCAATGATATTAAAAGTATATCATCTGAAATGGAGGGTAAGACAGAAG AGGAAGTTCAACGTTATGCTAGAGTTTTCAAGGAGAGATACAAGGAACTGAGTGATTATG ATAGAATTATAAAAAATATTGAAAGGGGGGAAGCAAGGATATCCCGCAAGGATGAGATTA TGAAGGCTATTGGGAAGAAGCTAGACCGCTACAAGAACCCATGGTTAGAGTTGAAAATTC AGTACGGCCAAAATAAAGGGAAGTTCTATAACGAGGAATGTGACCGCTTTATGCTTTGCA TGGTGCACAAACTTGGATATGGAAACTGGGATGAACTGAAAGCTGCCTTCCGTATGTCTC CCTTGTTTCGATTTGATTGGTTTGTGAAGTCCAGAACTACCCAAGAGTTGGCTAGGCGGT GTGATACCCTTATCCGACTGGTTGAGAAAGAAAATCAAGAATATGATGAGCAAGAGAGGC AAGCAAGGAAGGAGAAAAGGCTTGCTAAGAACATGACTCCAACAAAGCGAGCTGCACTAA AGAATTCAGAGGGTGAGAATACTCCACCGAGTTCATTCAAGAGACGACGGCAGTCCCTTA TGGACGACTATGTGGGCTCGGTAAG