Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d040829_T005
CDS Infomation	cds chromosome:B73_RefGen_v4:3:68286133:68295100:1 gene:Zm00001d040829 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transposon protein [Source:UniProtKB/TrEMBL;Acc:B6UFJ9]
Sequence	ATGGGCTGCGTCTTCGGCCGGGCGGCTGCGTCGTCCTCTGCAGCGCCGAAGAAGAAGTGG GGCCGCAGGGCGTCGGGACCCAGGCAGGGTTGCGTCCCCGCTGCTGCCGCGGCGGAGCAG CTCGCCGCCGGTTGGCCACCGTGGCTCGTCGCAGTCGCCGGGGAGGCCCTCCGCGGCTGG GCGCCGCGCCGCGCCGACACGTTCGAGAAGCTTAATAAGATAGGATCGGGCACGTACAGC AACGTGTACCGGGCGAGGGACACCGTCTCTGGCCGGATCGTCGCTCTTAAAAAGGTCCGC TTCGATAACCTCGAGCCAGAAAGCGTCAAGTTTATGGCCCGGGAAATACTGATCCTAAGG AGACTCGACCACCCCAACATCATCAAATTAGAGGGCTTGGTCACCTCCAGGATGTCATGC AGCCTTTACCTTGTCTTCGAGTACATGGAGCATGATCTTGCTGGTCTTGCGGCAAGTTGT GATGTCAAGTTCACGTTGCCTCAGATAAAATGTTACATACAGCAGCTGTTGTCAGGGCTT GAGCATTGTCATGACAATAATGTATTGCACCGGGATATCAAGGGGTCAAACTTGTTGTTG GATAATAATGGGATTCTTAAGATTGCGGATTTTGGGCTGGCAACATTCTTTGATCCACGA CATAAACGACCAATGACGAGCCGAGTGGTCACGCTATGGTACCGTCCACCAGAATTGTTA CTTGGTGCCACTGAGTATAGTGTAGGTGTTGATTTGTGGAGTGCTGGATGCATTCTTGCA GAGCTCCTGTATGGAAAGCCCATAATGCCTGGGCGCACTGAGGTGGAACAGTTGCACAAG ATTTTCAAGCTATGTGGTTCCCCTTCTGAGGAGTACTGGAAGAAGTCTAAATTGCCACAC GCAACAATATTCAAACCTCAACAACCCTATAAACGTTGCATCAGGGAGACATTTAAAGAT TTTCCTACATCGGCTCTGCCATTGGTTGAAACTCTGCTTGCAATTGATCCAGCTGAGCGA CAAACTGCCTCAGCTGCATTACACAGTGATTTTTTTTCAACCGAGCCTTATGCTTGTAAC CCTTCAAGTCTGCCAACATATCCACCAAGCAAGGAGATGGATGCCAAGTTAAGAGACGAG GAGGCTAGAAGACTACGAGCGGCTGCAAAGGCCAAGGGAGAACAGAAAAGGACTCGACCA CGTGATCGATCTCGGAGGGCTGGACCAGCACCAGAAGCTAATGCAGAGATTCAAGCAAAC TTAGACCAGAGGCGACGAATGATAACTCATGCAAATGCAAAGAGTAAAAGTGAGAAGTTT CCTCCTCCGCATCAGGATGGAGGTACGGGTAATCCGCTTGGATCCTATCATCATATGGAG CCTATGTTCGAGCACCAGGATGCTTCCTTCAGTACAGTAGTCCCCATAGAGAAGGGGACC TCACAAACATGGTCCGGGCCGTTGTTTGATCCAGCAGCTCTCGGGCAGTCGAGGCGGAAG AAGCAAACTACCCTAGATGCTAAGGCTGCTGCTTACTCAAAGCAGCTCCAAAAGGAAAAG GGAGGGATACGAGCCCGATAA

Peptide Sequence

PEP ID	Zm00001d040829_P005
PEP Infomation	pep chromosome:B73_RefGen_v4:3:68286133:68295100:1 gene:Zm00001d040829 transcript:Zm00001d040829_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transposon protein [Source:UniProtKB/TrEMBL;Acc:B6UFJ9]
Sequence	MGCVFGRAAASSSAAPKKKWGRRASGPRQGCVPAAAAAEQLAAGWPPWLVAVAGEALRGW APRRADTFEKLNKIGSGTYSNVYRARDTVSGRIVALKKVRFDNLEPESVKFMAREILILR RLDHPNIIKLEGLVTSRMSCSLYLVFEYMEHDLAGLAASCDVKFTLPQIKCYIQQLLSGL EHCHDNNVLHRDIKGSNLLLDNNGILKIADFGLATFFDPRHKRPMTSRVVTLWYRPPELL LGATEYSVGVDLWSAGCILAELLYGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPH ATIFKPQQPYKRCIRETFKDFPTSALPLVETLLAIDPAERQTASAALHSDFFSTEPYACN PSSLPTYPPSKEMDAKLRDEEARRLRAAAKAKGEQKRTRPRDRSRRAGPAPEANAEIQAN LDQRRRMITHANAKSKSEKFPPPHQDGGTGNPLGSYHHMEPMFEHQDASFSTVVPIEKGT SQTWSGPLFDPAALGQSRRKKQTTLDAKAAAYSKQLQKEKGGIRAR

Transcript Sequence

Transcript ID	Zm00001d040829_T005
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:68286133:68295100:1 gene:Zm00001d040829 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transposon protein [Source:UniProtKB/TrEMBL;Acc:B6UFJ9]
Sequence	GCCCTGGCGAGGAGGGCAGCAGAAACCCTAGCGGCTCAGGCCGGGCGGGGGTTAGATGCT CCAAGGTTCGAGAGGGAAGGGTAGGTTAGTGGTGCGCCATCGACTATGGGCTGCGTCTTC GGCCGGGCGGCTGCGTCGTCCTCTGCAGCGCCGAAGAAGAAGTGGGGCCGCAGGGCGTCG GGACCCAGGCAGGGTTGCGTCCCCGCTGCTGCCGCGGCGGAGCAGCTCGCCGCCGGTTGG CCACCGTGGCTCGTCGCAGTCGCCGGGGAGGCCCTCCGCGGCTGGGCGCCGCGCCGCGCC GACACGTTCGAGAAGCTTAATAAGATAGGATCGGGCACGTACAGCAACGTGTACCGGGCG AGGGACACCGTCTCTGGCCGGATCGTCGCTCTTAAAAAGGTCCGCTTCGATAACCTCGAG CCAGAAAGCGTCAAGTTTATGGCCCGGGAAATACTGATCCTAAGGAGACTCGACCACCCC AACATCATCAAATTAGAGGGCTTGGTCACCTCCAGGATGTCATGCAGCCTTTACCTTGTC TTCGAGTACATGGAGCATGATCTTGCTGGTCTTGCGGCAAGTTGTGATGTCAAGTTCACG TTGCCTCAGATAAAATGTTACATACAGCAGCTGTTGTCAGGGCTTGAGCATTGTCATGAC AATAATGTATTGCACCGGGATATCAAGGGGTCAAACTTGTTGTTGGATAATAATGGGATT CTTAAGATTGCGGATTTTGGGCTGGCAACATTCTTTGATCCACGACATAAACGACCAATG ACGAGCCGAGTGGTCACGCTATGGTACCGTCCACCAGAATTGTTACTTGGTGCCACTGAG TATAGTGTAGGTGTTGATTTGTGGAGTGCTGGATGCATTCTTGCAGAGCTCCTGTATGGA AAGCCCATAATGCCTGGGCGCACTGAGGTGGAACAGTTGCACAAGATTTTCAAGCTATGT GGTTCCCCTTCTGAGGAGTACTGGAAGAAGTCTAAATTGCCACACGCAACAATATTCAAA CCTCAACAACCCTATAAACGTTGCATCAGGGAGACATTTAAAGATTTTCCTACATCGGCT CTGCCATTGGTTGAAACTCTGCTTGCAATTGATCCAGCTGAGCGACAAACTGCCTCAGCT GCATTACACAGTGATTTTTTTTCAACCGAGCCTTATGCTTGTAACCCTTCAAGTCTGCCA ACATATCCACCAAGCAAGGAGATGGATGCCAAGTTAAGAGACGAGGAGGCTAGAAGACTA CGAGCGGCTGCAAAGGCCAAGGGAGAACAGAAAAGGACTCGACCACGTGATCGATCTCGG AGGGCTGGACCAGCACCAGAAGCTAATGCAGAGATTCAAGCAAACTTAGACCAGAGGCGA CGAATGATAACTCATGCAAATGCAAAGAGTAAAAGTGAGAAGTTTCCTCCTCCGCATCAG GATGGAGGTACGGGTAATCCGCTTGGATCCTATCATCATATGGAGCCTATGTTCGAGCAC CAGGATGCTTCCTTCAGTACAGTAGTCCCCATAGAGAAGGGGACCTCACAAACATGGTCC GGGCCGTTGTTTGATCCAGCAGCTCTCGGGCAGTCGAGGCGGAAGAAGCAAACTACCCTA GATGCTAAGGCTGCTGCTTACTCAAAGCAGCTCCAAAAGGAAAAGGGAGGGATACGAGCC CGATAACAAAATGTCGTTTTCCTGGTGAGCATGTGGAGGGACCGTGGGAAAGGTTCATCG CCTACGGATGAATTTTCTTGTTTTGTTCCTCTGGTGGTTGGAAACAGGCAACAATGCGCT GCTGTAGGGTGAAGTCTTCCGGATTGTGTACATGTCATGTGGTAGCGTTTCCAAGTACTG TTTAGATGCTTCTGAACAAGCTGCCGTCACCCGGACGGGACTTTAGGGGTTTGAGACTCG TATTTGTGCTCTTTATGGCAATTCAGTTGCCCATGTGTATATATGGAGCAATTCTTTCTT GTGTATGTACAGAGACGGCGGTAGCTTTGATTTCTTAATAATGAATCAAGTGTGATGGCG ACCTTCC