Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d040807_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:3:67151874:67157763:-1 gene:Zm00001d040807 gene_biotype:protein_coding transcript_biotype:protein_coding description:CASP-like protein 4

Sequence

ATGGAGACGCCGACGCCGCGGGTGAAGCCCGGGTTCAACGGCGTCGGCGTGGGCATGGGG
TCGTCCGTGAACGGCAGCAGCCGCCGCGCCGGCTACTACATGGGCCCGGCCGGCGCAGTG
GCCGTGGCGGGCGGCGGCAGGGCGGCAGCAGCAGCGCCGGTAGACGGGTGCAGCGTGGCG
CTGCGCGTGTTTGTGCTGGCGGCGACGCTGGTTTCCGCAGTGGTGATGGGCGTGGACCGG
CAGACGAGCACCATCCGAATCACCGTCACCGACGCGCTGCCGCCGCTGGAGGTGCCCCTC
ACCGCCAACTGGTCCTACTCCTCCGCCTTCGTCTACTTCGTGGTGGCGAACGCCATGGTG
TGCCTGTTCTCGGCGGCGGCGCTGGCGGCCTGCCGGAGCCGCGCCGCCATGGTGCCCGTG
ATGGTGGGCGACCTGCTGGCGCTGGCCCTGCTCTACTCGGCCGTGGGAGCCGCCGCGGAG
TTCGGCATCCTGGGCGAGCGCGGCAACTCGCACGTCCGCTGGCCTAAGGTCTGCAACGTC
TACGGCCGCTTCTGCGAGCGCGCCATGGCGGCCGTCATCGTCTCCCTCATCGCCGCATTC
GCCAACCTCGTCCTCCTCATGCTCAACATCCTCACCATCCACAAGAGCTCTTCCTACTAC
TAA

Peptide Sequence

PEP ID

Zm00001d040807_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:3:67151874:67157763:-1 gene:Zm00001d040807 transcript:Zm00001d040807_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:CASP-like protein 4

Sequence

METPTPRVKPGFNGVGVGMGSSVNGSSRRAGYYMGPAGAVAVAGGGRAAAAAPVDGCSVA
LRVFVLAATLVSAVVMGVDRQTSTIRITVTDALPPLEVPLTANWSYSSAFVYFVVANAMV
CLFSAAALAACRSRAAMVPVMVGDLLALALLYSAVGAAAEFGILGERGNSHVRWPKVCNV
YGRFCERAMAAVIVSLIAAFANLVLLMLNILTIHKSSSYY

Transcript Sequence

Transcript ID

Zm00001d040807_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:67151874:67157763:-1 gene:Zm00001d040807 gene_biotype:protein_coding transcript_biotype:protein_coding description:CASP-like protein 4

Sequence

ACACAAACACAACACATTACATACATCCCACGCTCTCTGCCGCACAGGCCACACACGCCC
CGCTCCGCCCGTCTACCCTTCACCCAAGAACCGCCCGCCGCGCCGCGCCGCTCCCATGGA
GACGCCGACGCCGCGGGTGAAGCCCGGGTTCAACGGCGTCGGCGTGGGCATGGGGTCGTC
CGTGAACGGCAGCAGCCGCCGCGCCGGCTACTACATGGGCCCGGCCGGCGCAGTGGCCGT
GGCGGGCGGCGGCAGGGCGGCAGCAGCAGCGCCGGTAGACGGGTGCAGCGTGGCGCTGCG
CGTGTTTGTGCTGGCGGCGACGCTGGTTTCCGCAGTGGTGATGGGCGTGGACCGGCAGAC
GAGCACCATCCGAATCACCGTCACCGACGCGCTGCCGCCGCTGGAGGTGCCCCTCACCGC
CAACTGGTCCTACTCCTCCGCCTTCGTCTACTTCGTGGTGGCGAACGCCATGGTGTGCCT
GTTCTCGGCGGCGGCGCTGGCGGCCTGCCGGAGCCGCGCCGCCATGGTGCCCGTGATGGT
GGGCGACCTGCTGGCGCTGGCCCTGCTCTACTCGGCCGTGGGAGCCGCCGCGGAGTTCGG
CATCCTGGGCGAGCGCGGCAACTCGCACGTCCGCTGGCCTAAGGTCTGCAACGTCTACGG
CCGCTTCTGCGAGCGCGCCATGGCGGCCGTCATCGTCTCCCTCATCGCCGCATTCGCCAA
CCTCGTCCTCCTCATGCTCAACATCCTCACCATCCACAAGAGCTCTTCCTACTACTAAGC
TAGCTACTATAGTATAGAGAAAAGAACCATATACAATGTGAGCTAGCTACTCATATATAG
CTGTTGCTGTTTGCAATTGCATGCATGGGGATTAACTAAAGATCGACCCCAACTTGTTGA
AAGAGTCCA