Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d040804_T005
CDS Infomation	cds chromosome:B73_RefGen_v4:3:66959572:66964277:-1 gene:Zm00001d040804 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein LOW PSII ACCUMULATION 1 chloroplastic
Sequence	ATGGCGGCCGTAGCGGCGGCTCCACGGCCGCAGCTCCCCATGCTATCTGGCGGCGGCGGC GCGGCACTTTCCAGTCTCACCCTCCAAACACTGGCCTTCATTTCCCCCCTCCCCATCAGC CGCTGTCACCGCTGTGTGCTCCGCTCCAACGCCTCGTCGTCCCCGTCTCCGCCGCCATCG CAGGAGGAGGCAGCGGCGGCTGAGGTGGTTCCAACAGCTGAGTCCTGCGTCAATCTCGGT CTCCAGCTCTTCTCCAAAGGCAGGGTGAAGGATGCTCTTGAACAATTTGAGAATGCATTA GAGCTGAATCCAACATCTATTGAGGCCCAGGCAGCGCTATATAACAAGGCATGCTGCCAT GCGTATAGAGAAGAAAGCAAAAAGGCTGCAGAATGTTTAAGGGAAGCTTTGAGAGACTAC AATCTCAAATTTGGTACCATACTTAATGATCCAGACTTGGCGCCATTCAGAGCATCACCA GAATTCAAGGAACTTCAAGAAGAGGCTTTGCGTGGTGGAGAAGATATTGGTTCTGGTTTC CGAAGAGACCTGAAACTCATTAGTGAAGTACAAGCACCATTCCGTGGTGTTCGAAGATTC TTCTATGTAGCTTTGACAGCAGCAGCTGGAATTTCAACATTCTTTACCATTCCCCGACTT GTACTAGCAGTTCGAGGGGGTGATGGCGCCCCTGATCTTCTGGAAACTGCTGGAAATGCT GCCATCAATATTGGAGGTATTGTTGTTCTGGTAGCTTTGTATTTCTGGGAAAACAAGAAA GAAGAGAAGCAGATCACACAAATTTCTCGTAATGAAACCCTTTCAAGATTACCTGTGCGC CTGTCAACCAATCGCATTATTGAACTTGTTCAACTCCGGGACATCACTAGGCCTGTTAGT ATAACTTTCTCTATCTTTAATGTCCACTGTATGTTTGCTGAAATTAATTGTTTTTCTCAT TTATTTCTGAAACCTTTATTCAGCCACTTGTCATTTGAGGTGTATTTTAGGTGA

Peptide Sequence

PEP ID	Zm00001d040804_P005
PEP Infomation	pep chromosome:B73_RefGen_v4:3:66959572:66964277:-1 gene:Zm00001d040804 transcript:Zm00001d040804_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein LOW PSII ACCUMULATION 1 chloroplastic
Sequence	MAAVAAAPRPQLPMLSGGGGAALSSLTLQTLAFISPLPISRCHRCVLRSNASSSPSPPPS QEEAAAAEVVPTAESCVNLGLQLFSKGRVKDALEQFENALELNPTSIEAQAALYNKACCH AYREESKKAAECLREALRDYNLKFGTILNDPDLAPFRASPEFKELQEEALRGGEDIGSGF RRDLKLISEVQAPFRGVRRFFYVALTAAAGISTFFTIPRLVLAVRGGDGAPDLLETAGNA AINIGGIVVLVALYFWENKKEEKQITQISRNETLSRLPVRLSTNRIIELVQLRDITRPVS ITFSIFNVHCMFAEINCFSHLFLKPLFSHLSFEVYFR

Transcript Sequence

Transcript ID	Zm00001d040804_T005
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:66959572:66964277:-1 gene:Zm00001d040804 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein LOW PSII ACCUMULATION 1 chloroplastic
Sequence	GCGGATAGCCTTAGGATAACGAGAAAGACGATAACCTCACACTTTCCTTCTCCCACGGCA ATGGCGGCCGTAGCGGCGGCTCCACGGCCGCAGCTCCCCATGCTATCTGGCGGCGGCGGC GCGGCACTTTCCAGTCTCACCCTCCAAACACTGGCCTTCATTTCCCCCCTCCCCATCAGC CGCTGTCACCGCTGTGTGCTCCGCTCCAACGCCTCGTCGTCCCCGTCTCCGCCGCCATCG CAGGAGGAGGCAGCGGCGGCTGAGGTGGTTCCAACAGCTGAGTCCTGCGTCAATCTCGGT CTCCAGCTCTTCTCCAAAGGCAGGGTGAAGGATGCTCTTGAACAATTTGAGAATGCATTA GAGCTGAATCCAACATCTATTGAGGCCCAGGCAGCGCTATATAACAAGGCATGCTGCCAT GCGTATAGAGAAGAAAGCAAAAAGGCTGCAGAATGTTTAAGGGAAGCTTTGAGAGACTAC AATCTCAAATTTGGTACCATACTTAATGATCCAGACTTGGCGCCATTCAGAGCATCACCA GAATTCAAGGAACTTCAAGAAGAGGCTTTGCGTGGTGGAGAAGATATTGGTTCTGGTTTC CGAAGAGACCTGAAACTCATTAGTGAAGTACAAGCACCATTCCGTGGTGTTCGAAGATTC TTCTATGTAGCTTTGACAGCAGCAGCTGGAATTTCAACATTCTTTACCATTCCCCGACTT GTACTAGCAGTTCGAGGGGGTGATGGCGCCCCTGATCTTCTGGAAACTGCTGGAAATGCT GCCATCAATATTGGAGGTATTGTTGTTCTGGTAGCTTTGTATTTCTGGGAAAACAAGAAA GAAGAGAAGCAGATCACACAAATTTCTCGTAATGAAACCCTTTCAAGATTACCTGTGCGC CTGTCAACCAATCGCATTATTGAACTTGTTCAACTCCGGGACATCACTAGGCCTGTTAGT ATAACTTTCTCTATCTTTAATGTCCACTGTATGTTTGCTGAAATTAATTGTTTTTCTCAT TTATTTCTGAAACCTTTATTCAGCCACTTGTCATTTGAGGTGTATTTTAGGTGATATTGG CAGGTTCAAAAGCATCTGTTACTCGGGCATTGCAAAGAGCTGAGAGGTATCGGACTGAAC TGCTCAAACGAGGCGTTCTTCTAATTCCTGTGATCTTTGGTGCTTCTCAGAAAGACCAAA CCAAACCAAGGGGTTTTGGTGCAAGAAGAGCTGCTGCATCAGTTCCTTCTGTTGGGGTTA GACCAACCTTACATATTGGCTAAATACCAAAAACCTCACCTGCCTCTTAGTTTGTGTGTT TTGCACCAAAAACTTGGTCCCTTTCTTTGATAATTTAATGCAATGTTGATTTTGACAGGG TGACTTTGAAAAGCGTACTGAATCTATTGCAGCAAAATCACGGTTGAAGACTGAGGTTCG GTTTAAGGCTGATATTGTTTCCCCAGAACAATGGGAAAGGTGCATTTCCTTTGATGTATA TGCATTTTGTCCTATACTCTATATCTAACTTCAATAAGTAGCAAGACTGTTTTTCACAAG TACATATTTTTTTCTAACATAGCACAATAAGTCAATAACATAATTAAGGTACATAGATTG TGTAGCAGCACAGAAGGGAAATTATTAGAAAGATATATAAACTTACAATCCACCCTAAAG TAAAGGATTATGATCTTCCCCTCTATAGCACACACCATACTTGAAACTTGAAAGCCATAT TGCTCACTCAGGTAAAGAAGTAGGGTTTTTTTTGGGGCCAATGCAGCATTATAATGGAAA TGTTATCTGTAAAACCACAGAATATTGAAAAGATACAGTGTCCTTTGATTCTTCTCCTCC CATAGGCCATAGGTATGATTGCAGAAAAAACATATCCATATGTTTAGGTTCTGATATGGC ATCTATCCCTTTTACTGCATCCACATATTGATAGGACCTGAGGTATGAAATAATCTGTCT CAAGTCTAAATTTCAAGATATCTTTACTTGTTTTGCTCCCATTTCTAGTCTGTGCCTTTA CATTACTTCTCTTTTCTAAGGACCGCTACAGAAATACTACAAGTGCAGTCAGTCCTGTTC CTTTTCTGTTATTATTAGCATGGTTCTACATGCTTGAATGTGGTAATTTACTATCCTGGG TTTTGATATCTACCTGTTCTCATTATGGTTCAGTTGGATACGAGACCAGCAAGTGTCTGA AGGTGTCACTCCTGGTGAGGATGTCTACATAATCCTTCGTCTCGATGGACGTGTCAGAAG ATCTGGAATAGGCATGCCAAACTGGAATGACATATTACAGGAACTGCCACGACTTGAAGA TCTGATGAGCAAACTTGAACGGTGAAAAAGGTGTGGGAGCAGCTAAAGTTTTACCATTAC TCTTTTTCCCCCATTCCATTCGCCTTGCCCTTATCTGCTGAAACTTGAAGCTGGACCATC GTAGTTCTTGTATAATATAGTGAAATTCTG