Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d040757_T002
CDS Infomation

cds chromosome:B73_RefGen_v4:3:63809562:63812638:1 gene:Zm00001d040757 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcription initiation factor IID%2C 18kD subunit family protein

Sequence

ATGCAGAACCCTAGCGGCCACCACCCCGCGACGGCCGCCCCGACGTCGGCGCCGTCCAAG
GGCAAGTCGTCGGCGCCGAACCCTAGCGGCAACCACGCTGCGACGCCGGCGCCATCGGGG
ACGCCTTCCAAGGGCAAGTCGGCGGCAGCGCAGGCCGCGGCTTTGGGCCACGGTTCCTCC
TCCCACCACCACTCTGCCGGCGGTGGCGGTGGTGGCGCTGACGCGTCCGCCACCACCCTC
AAGCGCAAGCGCGGCGTCTTCCAGAAAGACCTGCAACACATGATGTATGGCTTTGGGGAT
GATCCAAATCCACTTCCAGAAACCGTTGCACTTGTGGAAGACATTGTTGTGGAATATGTC
ACTGACCTGGTGCACAAGGCGCAGAACGTTGCCTCAAAGAGGGGGAAGCTCCTGACAGAG
GATTTTCTTTATCTTATACGCAAGGATTTACGGAAACTGCACCGTGCTACTGAACTACTG
TCCATGAATGAAGAGCTCAAGCAAGCAAGGAAAGCTTTTGACGTGGATGAAGAGACGCTG
GCTACGACTAACATATGA

Peptide Sequence

PEP ID

Zm00001d040757_P002
PEP Infomation

pep chromosome:B73_RefGen_v4:3:63809562:63812638:1 gene:Zm00001d040757 transcript:Zm00001d040757_T002 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcription initiation factor IID%2C 18kD subunit family protein

Sequence

MQNPSGHHPATAAPTSAPSKGKSSAPNPSGNHAATPAPSGTPSKGKSAAAQAAALGHGSS
SHHHSAGGGGGGADASATTLKRKRGVFQKDLQHMMYGFGDDPNPLPETVALVEDIVVEYV
TDLVHKAQNVASKRGKLLTEDFLYLIRKDLRKLHRATELLSMNEELKQARKAFDVDEETL
ATTNI

Transcript Sequence

Transcript ID

Zm00001d040757_T002
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:63809562:63812638:1 gene:Zm00001d040757 gene_biotype:protein_coding transcript_biotype:protein_coding description:Transcription initiation factor IID%2C 18kD subunit family protein

Sequence

TGAATTACAGAATTAAGTCTATAGAAACTGACGCGCTTCGTGCGATTCCGCTCTTGTTCG
CGGAAATCGGCATCCTCCCGGCTACCCCGGGCCGGGAATCGAAAAGGCTGCCGTGTTCTC
CACTTCTCCGCCTTACCCTGCTCTCCTGGACCTCCGACGCACCCCAAACACCGCAGAGAT
GCAGAACCCTAGCGGCCACCACCCCGCGACGGCCGCCCCGACGTCGGCGCCGTCCAAGGG
CAAGTCGTCGGCGCCGAACCCTAGCGGCAACCACGCTGCGACGCCGGCGCCATCGGGGAC
GCCTTCCAAGGGCAAGTCGGCGGCAGCGCAGGCCGCGGCTTTGGGCCACGGTTCCTCCTC
CCACCACCACTCTGCCGGCGGTGGCGGTGGTGGCGCTGACGCGTCCGCCACCACCCTCAA
GCGCAAGCGCGGCGTCTTCCAGAAAGACCTGCAACACATGATGTATGGCTTTGGGGATGA
TCCAAATCCACTTCCAGAAACCGTTGCACTTGTGGAAGACATTGTTGTGGAATATGTCAC
TGACCTGGTGCACAAGGCGCAGAACGTTGCCTCAAAGAGGGGGAAGCTCCTGACAGAGGA
TTTTCTTTATCTTATACGCAAGGATTTACGGAAACTGCACCGTGCTACTGAACTACTGTC
CATGAATGAAGAGCTCAAGCAAGCAAGGAAAGCTTTTGACGTGGATGAAGAGACGCTGGC
TACGACTAACATATGATGTCTTCCTAGTCGGAGAATCTGCGTGTTACTGTAACCAGTTGT
ACAATGCACTGCATGTGTCTGACAATTGTTGGCGTCGACTTGTAACTGTTCCGCTACAGA
CTTTAGCTATTTTCTTGACAGTTACTGCGTTAATGTCTGTATGCCCTGCTCAGTGAAGAA
GTCCGCTGGTTCCACACATTCGCAATGTAAAAATGCACAGGTTTTTTTTTTGCTTGTTTT
GAATAGGACAATTCATGAAAATTACTGGTGGAGGAGATATTTGGAAGTAAAATTGCCAGA
CAATTTACAGATTT