Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d040748_T090
CDS Infomation	cds chromosome:B73_RefGen_v4:3:62645607:62666049:-1 gene:Zm00001d040748 gene_biotype:protein_coding transcript_biotype:protein_coding description:binding
Sequence	ATGGCCGAGCAGGAGGGGAGGGACGCGGAAGCGGGGGGCGATGCCGCGGCCGCAGCGGTG GCGTCGCACACCAGCAGCATGCAGCGTGTCAAAGTATACCGTTTGGCTGATGGTGGGAAG TGGGACGATCAAGGAACAGGTTATGTTTCTATTGATTACATTGAGGGTTCAAAAGAACTA GGTTTGACTGTTTTAGATGAAGATGACAATGATACACTACTTATGCACAACATCACATCT GACGATATTTACAGAAAACAAGAAGAAACAATCATTTCATGGAGAGATCGTGAAGCAGCA ACAGACTTAGCGTTAAGCTTTCAGGAAGCTGCTGGATGCTCCTACATATGGGAACACATA TGCGATATTCAGAGAAACCTTCAGTTCAGTAACCTTGGTGCTCTGGAAGTTGGTCCTCGT CAATCATCAGAATCTCTAGAAGCCTCTAGAATAATGCATTCTAATGATGATTCATTCCGC TCTGCCAACGGCGGCGAATTCAGGGAGAAGTTTTTGGTTGTAGCAGCTGTTAGATTTATG CGTACTATTATATCCAGAAATGATGACCATCTCATTCGCCATGTTGTGAAGTTCAACTTG CTGAAACCAATAATTGATGTCTTTGTTGACAATGGGGAGAGATATAACATGCTACATTCA GGAGTACTCGAATTGTTGGAATACATACGGAAGGAAAATATAAAAACTCTCATTATCTAT GCTATTGAGTCTTTCTGGGATGAACTTGCCATCTTTGAACACTTTGGAAGTATTCAGGCC TTCAAACTCAAGTATCAACAGTACCTGGAGAGCGCTGAACCAAGGTTGAATGCTAGTGTG CCTGACATGAGAAAGAAGGCAGAACAAAGAGGTCTTGAGAAGGAAGAGGAAGACTACTTC AATGAGGACAGTGATGAAGAAGATTCAGGCTCCGGCCGGCGGGCTAAACATGCACAGAAC CAAAATAACAAGCCTAAGTCCAAGGTCCCCAATGGAAGTGAAGCTGATGACACTGATGGC GCCTCTAGGCCTAAATCTGCTGGACTTGTGGACTATGACGATGATGACGATGAGGACTTC AATCCACCACCAAAGGAGCCTTCTAGGCCTGCAGAGGATGATGTGCCCTTAAACATATCC CCGTTGAAGCGGAAGCCAGTGAATGCAGTGGATGGGAAACATTCAGACGGAGAGGGTCGC AGGAGGCAAAAAATAGAAACTAGAATTAGTTGTGCTAAAATTGCTGCTGTTACTAGTACA GCTATTAAGCACACAGATCTACAAAACAAGTATGCTTCCCACTTGCTTACGTCAGCCACA CCAAGTACTGAAGCCAATGGTATTTTTAGTGAACATGGTACTAACTATGAGGAGCAACAA CATCCTATGGAGAACACAGAAACTTCACGACAAACTGGTGGTGATTGTATAAAAGATGTG GGCAGTATGTCTCCCGAGAAGGCCGTAAATACTACCAATACAAGCGATTCGGAGCCTTAT TCAGTAAGATGA

Peptide Sequence

PEP ID	Zm00001d040748_P090
PEP Infomation	pep chromosome:B73_RefGen_v4:3:62645607:62666049:-1 gene:Zm00001d040748 transcript:Zm00001d040748_T090 gene_biotype:protein_coding transcript_biotype:protein_coding description:binding
Sequence	MAEQEGRDAEAGGDAAAAAVASHTSSMQRVKVYRLADGGKWDDQGTGYVSIDYIEGSKEL GLTVLDEDDNDTLLMHNITSDDIYRKQEETIISWRDREAATDLALSFQEAAGCSYIWEHI CDIQRNLQFSNLGALEVGPRQSSESLEASRIMHSNDDSFRSANGGEFREKFLVVAAVRFM RTIISRNDDHLIRHVVKFNLLKPIIDVFVDNGERYNMLHSGVLELLEYIRKENIKTLIIY AIESFWDELAIFEHFGSIQAFKLKYQQYLESAEPRLNASVPDMRKKAEQRGLEKEEEDYF NEDSDEEDSGSGRRAKHAQNQNNKPKSKVPNGSEADDTDGASRPKSAGLVDYDDDDDEDF NPPPKEPSRPAEDDVPLNISPLKRKPVNAVDGKHSDGEGRRRQKIETRISCAKIAAVTST AIKHTDLQNKYASHLLTSATPSTEANGIFSEHGTNYEEQQHPMENTETSRQTGGDCIKDV GSMSPEKAVNTTNTSDSEPYSVR

Transcript Sequence

Transcript ID	Zm00001d040748_T090
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:62645607:62666049:-1 gene:Zm00001d040748 gene_biotype:protein_coding transcript_biotype:protein_coding description:binding
Sequence	CGAACACGCGCACAAAAAATATTGACAAAAACCGGAGGGGTAAAAGGGGAAAGGCCACGG CCGCCTGGAGGAGCGAGAGGGCGGAAGAGGGGAAGCGGCAGCCGCAGGCCCGCAGCTCGT CGATGGTGGTTAGGGTTTCGCCGCCCGCACCCTCGACCAGCTGAAGAATCGCCCGGTGGT TGAAGAGGCTCGCGCCTCGCCCTACAAGGCTCCAAGGGAAGAGGGGATAGACAGCGGCGG ACCGCGGCGTGCGGCTGATGGCCGAGCAGGAGGGGAGGGACGCGGAAGCGGGGGGCGATG CCGCGGCCGCAGCGGTGGCGTCGCACACCAGCAGCATGCAGCGTGTCAAAGTATACCGTT TGGCTGATGGTGGGAAGTGGGACGATCAAGGAACAGGTTATGTTTCTATTGATTACATTG AGGGTTCAAAAGAACTAGGTTTGACTGTTTTAGATGAAGATGACAATGATACACTACTTA TGCACAACATCACATCTGACGATATTTACAGAAAACAAGAAGAAACAATCATTTCATGGA GAGATCGTGAAGCAGCAACAGACTTAGCGTTAAGCTTTCAGGAAGCTGCTGGATGCTCCT ACATATGGGAACACATATGCGATATTCAGAGAAACCTTCAGTTCAGTAACCTTGGTGCTC TGGAAGTTGGTCCTCGTCAATCATCAGAATCTCTAGAAGCCTCTAGAATAATGCATTCTA ATGATGATTCATTCCGCTCTGCCAACGGCGGCGAATTCAGGGAGAAGTTTTTGGTTGTAG CAGCTGTTAGATTTATGCGTACTATTATATCCAGAAATGATGACCATCTCATTCGCCATG TTGTGAAGTTCAACTTGCTGAAACCAATAATTGATGTCTTTGTTGACAATGGGGAGAGAT ATAACATGCTACATTCAGGAGTACTCGAATTGTTGGAATACATACGGAAGGAAAATATAA AAACTCTCATTATCTATGCTATTGAGTCTTTCTGGGATGAACTTGCCATCTTTGAACACT TTGGAAGTATTCAGGCCTTCAAACTCAAGTATCAACAGTACCTGGAGAGCGCTGAACCAA GGTTGAATGCTAGTGTGCCTGACATGAGAAAGAAGGCAGAACAAAGAGGTCTTGAGAAGG AAGAGGAAGACTACTTCAATGAGGACAGTGATGAAGAAGATTCAGGCTCCGGCCGGCGGG CTAAACATGCACAGAACCAAAATAACAAGCCTAAGTCCAAGGTCCCCAATGGAAGTGAAG CTGATGACACTGATGGCGCCTCTAGGCCTAAATCTGCTGGACTTGTGGACTATGACGATG ATGACGATGAGGACTTCAATCCACCACCAAAGGAGCCTTCTAGGCCTGCAGAGGATGATG TGCCCTTAAACATATCCCCGTTGAAGCGGAAGCCAGTGAATGCAGTGGATGGGAAACATT CAGACGGAGAGGGTCGCAGGAGGCAAAAAATAGAAACTAGAATTAGTTGTGCTAAAATTG CTGCTGTTACTAGTACAGCTATTAAGCACACAGATCTACAAAACAAGTATGCTTCCCACT TGCTTACGTCAGCCACACCAAGTACTGAAGCCAATGGTATTTTTAGTGAACATGGTACTA ACTATGAGGAGCAACAACATCCTATGGAGAACACAGAAACTTCACGACAAACTGGTGGTG ATTGTATAAAAGATGTGGGCAGTATGTCTCCCGAGAAGGCCGTAAATACTACCAATACAA GCGATTCGGAGCCTTATTCAGTAAGATGACTACTACACAGCTGGTTGGTCCATGTACCCA TCCTGTGCTGTGGTCAACAGGAAGGAATCAGAATGTGTTTGGCTCCAAGCGCTGAATGCA TCGATATCATGCTGGAAACATGATTGGAGGTGACATAGATTGCAGCTACCTTTACATCTC AAGTAAAATTCCAGTTACCCCTTTTTGCGCCTGTAAAGTTAATTTTCCGCAAGGACAGAT CTGACAAACATGATAATAGGAATGACTGTAGATTCGAACATTGGATGGGCCTTGCTCCTG CTGCTGCGCTCGCTATTGTATCGGTTTATGAGCCAACGTAGTAGTGAATATGTGCCTTCA ACT