Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d040717_T005
CDS Infomation	cds chromosome:B73_RefGen_v4:3:59836393:59845793:1 gene:Zm00001d040717 gene_biotype:protein_coding transcript_biotype:protein_coding description:CONTAINS InterPro DOMAIN/s: Craniofacial development protein 1/Bucentaur (InterPro:IPR011421); Has 333 Blast hits to 324 proteins in 149 species: Archae - 0; Bacteria - 18; Metazoa - 117; Fungi - 96; Plants - 49; Viruses - 0; Other Eukaryotes - 53 ( /.../: NCBI BLink).
Sequence	ATGGCGTCAACTAGCTCCGCCGGGGACGTGGGAGACTCAGGGTCAAAAGGTGCGGTTGCA GATAAAACACTTACTGCTTCTGCAAACACTAGTAGCTCACATCAAGAATCTCATGATGTT GATGCAAAATCACGTGTGGAGGACATTTGGAAGAAAATGAACAGTGGTTTTCCTAATAAG ATGCCCAAACCTGCAATGACAAAGCTCAGTACAACAGAAAAACAAAAGAAAAATAAACCA ACAAATAATTGGATGACTGTTCTAGGCCTTTCACCAAGCAAGGCACATAGTGTCGATCAA GGATCCAAAAATGGGCTACAACAGACACAACATGAAATGAGCGAGGATGCTAAAAAACTT GCAGCCAAGGCCCTTGCAGCTGCCAAAAATGCTGCTGCTGTGGCATCTGGACGAGGGAAA GTGGAGATCACTGAGGTAAGGGACTTTGCTGGGAAGGACATCGAAATCAAGAAACTGGTT GATGCTAATTCAAAGGAGGCAATCGAGAAGGCCAGGGCAGGTGGTGCCGCCCCATCAGCT GTCGATAACATCCTAGAGCAAATACGGAAGAAGCAGAAGCTGAGCGTCCTGGACAAGACG AAGAAAGACTGGGGAGAGTACAAGGAAGAGAACCGGGGCTTGGGGGAAGAGCTGGACGCC TACAAGAAGAGCTCGAACCAGTACCTTGACAAGCAATCATTTCTGCAGCGAACCGATTAC CGCGAGTTTGAGCGCGAGCGGGATGCCCGGCTGTCAATGATGGCCAAGCGGAGGACAGAT ACGCGGGAGGACTGA

Peptide Sequence

PEP ID	Zm00001d040717_P005
PEP Infomation	pep chromosome:B73_RefGen_v4:3:59836393:59845793:1 gene:Zm00001d040717 transcript:Zm00001d040717_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:CONTAINS InterPro DOMAIN/s: Craniofacial development protein 1/Bucentaur (InterPro:IPR011421); Has 333 Blast hits to 324 proteins in 149 species: Archae - 0; Bacteria - 18; Metazoa - 117; Fungi - 96; Plants - 49; Viruses - 0; Other Eukaryotes - 53 ( /.../: NCBI BLink).
Sequence	MASTSSAGDVGDSGSKGAVADKTLTASANTSSSHQESHDVDAKSRVEDIWKKMNSGFPNK MPKPAMTKLSTTEKQKKNKPTNNWMTVLGLSPSKAHSVDQGSKNGLQQTQHEMSEDAKKL AAKALAAAKNAAAVASGRGKVEITEVRDFAGKDIEIKKLVDANSKEAIEKARAGGAAPSA VDNILEQIRKKQKLSVLDKTKKDWGEYKEENRGLGEELDAYKKSSNQYLDKQSFLQRTDY REFERERDARLSMMAKRRTDTRED

Transcript Sequence

Transcript ID	Zm00001d040717_T005
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:59836393:59845793:1 gene:Zm00001d040717 gene_biotype:protein_coding transcript_biotype:protein_coding description:CONTAINS InterPro DOMAIN/s: Craniofacial development protein 1/Bucentaur (InterPro:IPR011421); Has 333 Blast hits to 324 proteins in 149 species: Archae - 0; Bacteria - 18; Metazoa - 117; Fungi - 96; Plants - 49; Viruses - 0; Other Eukaryotes - 53 ( /.../: NCBI BLink).
Sequence	GCTGCCAAGCCTAGTTCTTTCCTCTCCTCTCTTTTTCAGCCCCCGGAGCCGCCTGCGTCA CCACATCGTCATCGTGCGTGTAGGAGTGTCCTCCAGATCCAGAGCCGGCGCGCCGCCCCT GCCTCTCCTGGCCTCTCCGCCCTCCGAGCGCGCGCCGACGCCGCCCCTAGCGCCGCCCGT AGCTCTAGCGTCGACGCCCTGCCGACGCCCAGAAAGCGTCCCGGCCTTCACGTAAGTTGC AGACTGCTTGCTCTTGGTCTGGTTCTCCTAGGCATTGCCAGTGAGCAGACGTTCGTGTAA AGAGCAGTAGCTGGAAGTCCCGAGTCTCGAGTGGAGGCGGATCCAAAGCCAAAGCCAAAG CCAACAACCGCCGCTGGGACGCGAGGGATCGATTCGGAGATGGCGTCAACTAGCTCCGCC GGGGACGTGGGAGACTCAGGGTCAAAAGGTGCGGTTGCAGATAAAACACTTACTGCTTCT GCAAACACTAGTAGCTCACATCAAGAATCTCATGATGTTGATGCAAAATCACGTGTGGAG GACATTTGGAAGAAAATGAACAGTGGTTTTCCTAATAAGATGCCCAAACCTGCAATGACA AAGCTCAGTACAACAGAAAAACAAAAGAAAAATAAACCAACAAATAATTGGATGACTGTT CTAGGCCTTTCACCAAGCAAGGCACATAGTGTCGATCAAGGATCCAAAAATGGGCTACAA CAGACACAACATGAAATGAGCGAGGATGCTAAAAAACTTGCAGCCAAGGCCCTTGCAGCT GCCAAAAATGCTGCTGCTGTGGCATCTGGACGAGGGAAAGTGGAGATCACTGAGGTAAGG GACTTTGCTGGGAAGGACATCGAAATCAAGAAACTGGTTGATGCTAATTCAAAGGAGGCA ATCGAGAAGGCCAGGGCAGGTGGTGCCGCCCCATCAGCTGTCGATAACATCCTAGAGCAA ATACGGAAGAAGCAGAAGCTGAGCGTCCTGGACAAGACGAAGAAAGACTGGGGAGAGTAC AAGGAAGAGAACCGGGGCTTGGGGGAAGAGCTGGACGCCTACAAGAAGAGCTCGAACCAG TACCTTGACAAGCAATCATTTCTGCAGCGAACCGATTACCGCGAGTTTGAGCGCGAGCGG GATGCCCGGCTGTCAATGATGGCCAAGCGGAGGACAGATACGCGGGAGGACTGAAATGTT TCCCTGTAACTCCGTTGTAGACATTCTTTCGAGATAATGGTAGACACTAAATTGTCAATG CCTTCCAGCCCCGTTAAATCTTCTTTTTTAGAATTATAATGTGCTGATTATAATTTACAA AGATGCACCGTGCATGTGCGTAAATTGCATCTGGTGGTTTTG