Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d040694_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:3:58714535:58717748:1 gene:Zm00001d040694 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATCGAAACGAACCAAACCAACCAACTCGCCACCCTCCCAAGCCGCGCGCAGCCCCA
ACCCCACCGCCGGCGCCGACTAGGCAGGCAGAGCGAACCACGCCAGCCATGTCGTCGTCG
TCGTCGTTCAAAGCGGGGGAGTCGTCTCGCGCCCGCGAGGAACTGAATCGCAAATACGAG
GTCAAGTTCCAGCCCGGCCCGTGGGCGGCACTCTCTTCCATCGCCGTCGTCCTCGACGAC
TCCGCCGGAAACGAGGAGCGAGCAAAGCTGCTCGCGCCCGGCGCCTCCGACTTCCTTCTC
GACCTCCGGCCCCCGCTGGACGGCGCCTCCTACCTGGTCCTGCCCAAGCGCCTGGTCCAG
GACTCGAAGTGGTTCAGCTTTCCCTGCGTCATCTCCGCCTGCTCCGACCGCCTCCTCTTC
CTCGTTAGCCGCGGCGACCAAGACAGGAACTACGCCTACTTCCTCGGTGACGCCCACGCC
GGCACTGCCGCCCTCCTCCCCGACGTCCCCGCCCACCTCGGCGTCGAAACTAATTTCCCG
CGACGCAGCATCGGCCTCATCGCCGACCCGCGACACGGTGGCCACTACATGGTGGCCCAT
CTGTATCCCACCTCCACGACCCGCCACCAGACCCTGCTCTGCTACTCCACCGTCACCGAC
CAGTGGACCGCCAGGCCGCTGGTCTCCGCCCCGGACCACCCGCCTTGGGGCGCTCACGGC
GTCCTCGCCCACGGCGGCCTCCTCTGGTGGATCGACGTCGCCTACGGCATGCTCGTCTGC
AACCCTTTCGCTGCCGACGACGGCCTGCGCCTGCGCTTCATCCCGCTCCCGCTTGGCTGC
CAGATGAAGGCCCTCACCGGGCGCGCCCGCCTCTTCCTCGAAGACATGATGGACCGCCGA
CGCATCATCAGGCTCAGCCAGGGCAAGCTGCGCTACGTCGCGATCCAGGTCCAGCGAATC
CCCAAGGATCAGGCCACGGTCTGCATGTTCACGCTTGTCCTCAGGCAGGGGGGCCAGCAT
TCCTGGGAACACGAGTACACGGTGACCTTCGCCGACATATGGAGCCACCGCAGCTATGCC
GATGCCAGACTGCCGTCGGGCGTGGTGCCCTCGCTCGCCTTCGTCGACCCCAACAACCCC
AACATCCTCTACTTCTTCCTGGACAAGACGCTCTTCGCACTGGACGCACAAGCCAGGCAG
GTCCTGCACCACATGGAGTACTCGTTAGACCCCGATTATTACGGGCAACTCAGGGTCCGG
TACTCCTGCTTCGTTGATGCCTGGGTGCTGCCGCCAACGCTTCTCCGCAAGGGTGACAGC
CGGTGGACTTATGACGACGACGAAGGAACGGATGGATCTGATTTCGACCAAACAACATCT
CTGTTGTCCCTGATGGAAATCAAGAGCCAGTTAGACGACGAAGGAACGGATGGATCTGAT
TTCGACCAAACAACATCTCTGTTGTCCCTGATGGAAATCAAGAGCCAGTTAGACGACGAA
GGAACGGATGGATCTGATTTCGACCAAACAACATCTCTGTTGTCCCAGATGGAAATCAAG
AGCCAGTCAGACAGGGAGCAGACGACGGCTGCCGATGTGGCAGCTGCCGACTCCGATGTG
GCAGCTGCCGACTCCGATGAACAAGCTAACAGGGAGCAGACGAAGGCTGCCGATGTCCCA
GCTGCCGACTCCGGTGAACAAGCTAACAGGGAGCAGATGACGGCTGCCGATGTACCAACT
GCCGACTCCGATGAACAAGATGACCAAGCTGCCGACTGCGATGAACAAGCTAACAGGGAG
CAGACGACGGCTGCCGACTCCGGTGAACAAGATGTCCCAGCTGCCGACTCCGGTGAACAA
GATATCCCAGCTGCCGACTCCGGTGATCAAGATGTCCCAGCTGCCGATTCCGGTGAACAA
GCTAATAGGGAGCAGACCACGGCTGCCGTTGTACCAGCTGCCGACTCCGGTGAACAAGAT
GTCCCAGCTGCAGACTCCGGTGAACAAGATCTCCCAGCTGCCGACTCTGGTGAACAAGAT
ATCCCTGCTGCCGACTCTGGTGAACAAGATGTCCCAGCTCCCGATTCCGGTGAACAAGCT
AAGAGGGAGCAGACCACGGCTGCCGATGTCCCAGATGTCGACTCCGGTGAACATGATGTC
CCAGCTGCCGACTCCGGTGAACAAGCTAACATGGAGCAAACCACGGCTGCCGATGTCCCA
GCTGCCGACTCCGGTGAACAAGATATCCCAGGCTTCCCAGCTGCCGTCTCCGGTGAACAA
GCTAACAGGGAGCAGACCACGGCTGCCGATATCCCAGCTGCCGACTCCGGTGAACAAGAT
ATCCTAGCTGCCGACTCCGGTGAACAAGCTAACAGGGAGCAGACCACGACTGTCGATGTC
CCACCTGCCGACTCCGGTGAACAAGATGTCCTAGCTGCCTACTCCGATGAACAAGATATC
CGAGCTGCCGATTTCGGTGAACAAGCTAACAGAGAGCAGACGATGGCTGTCGATGTCCCA
GCTGCCGACTCTGGTGAACAAGCTAACAGGGAGCAGACGACGGCTGCCGATGTCCTAGCC
GCCGACTCCGATGAAGAAGCTGATGTTGAACCATAG

Peptide Sequence

PEP ID

Zm00001d040694_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:3:58714535:58717748:1 gene:Zm00001d040694 transcript:Zm00001d040694_T001 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDRNEPNQPTRHPPKPRAAPTPPPAPTRQAERTTPAMSSSSSFKAGESSRAREELNRKYE
VKFQPGPWAALSSIAVVLDDSAGNEERAKLLAPGASDFLLDLRPPLDGASYLVLPKRLVQ
DSKWFSFPCVISACSDRLLFLVSRGDQDRNYAYFLGDAHAGTAALLPDVPAHLGVETNFP
RRSIGLIADPRHGGHYMVAHLYPTSTTRHQTLLCYSTVTDQWTARPLVSAPDHPPWGAHG
VLAHGGLLWWIDVAYGMLVCNPFAADDGLRLRFIPLPLGCQMKALTGRARLFLEDMMDRR
RIIRLSQGKLRYVAIQVQRIPKDQATVCMFTLVLRQGGQHSWEHEYTVTFADIWSHRSYA
DARLPSGVVPSLAFVDPNNPNILYFFLDKTLFALDAQARQVLHHMEYSLDPDYYGQLRVR
YSCFVDAWVLPPTLLRKGDSRWTYDDDEGTDGSDFDQTTSLLSLMEIKSQLDDEGTDGSD
FDQTTSLLSLMEIKSQLDDEGTDGSDFDQTTSLLSQMEIKSQSDREQTTAADVAAADSDV
AAADSDEQANREQTKAADVPAADSGEQANREQMTAADVPTADSDEQDDQAADCDEQANRE
QTTAADSGEQDVPAADSGEQDIPAADSGDQDVPAADSGEQANREQTTAAVVPAADSGEQD
VPAADSGEQDLPAADSGEQDIPAADSGEQDVPAPDSGEQAKREQTTAADVPDVDSGEHDV
PAADSGEQANMEQTTAADVPAADSGEQDIPGFPAAVSGEQANREQTTAADIPAADSGEQD
ILAADSGEQANREQTTTVDVPPADSGEQDVLAAYSDEQDIRAADFGEQANREQTMAVDVP
AADSGEQANREQTTAADVLAADSDEEADVEP

Transcript Sequence

Transcript ID

Zm00001d040694_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:58714535:58717748:1 gene:Zm00001d040694 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GCGATATGGATCGAAACGAACCAAACCAACCAACTCGCCACCCTCCCAAGCCGCGCGCAG
CCCCAACCCCACCGCCGGCGCCGACTAGGCAGGCAGAGCGAACCACGCCAGCCATGTCGT
CGTCGTCGTCGTTCAAAGCGGGGGAGTCGTCTCGCGCCCGCGAGGAACTGAATCGCAAAT
ACGAGGTCAAGTTCCAGCCCGGCCCGTGGGCGGCACTCTCTTCCATCGCCGTCGTCCTCG
ACGACTCCGCCGGAAACGAGGAGCGAGCAAAGCTGCTCGCGCCCGGCGCCTCCGACTTCC
TTCTCGACCTCCGGCCCCCGCTGGACGGCGCCTCCTACCTGGTCCTGCCCAAGCGCCTGG
TCCAGGACTCGAAGTGGTTCAGCTTTCCCTGCGTCATCTCCGCCTGCTCCGACCGCCTCC
TCTTCCTCGTTAGCCGCGGCGACCAAGACAGGAACTACGCCTACTTCCTCGGTGACGCCC
ACGCCGGCACTGCCGCCCTCCTCCCCGACGTCCCCGCCCACCTCGGCGTCGAAACTAATT
TCCCGCGACGCAGCATCGGCCTCATCGCCGACCCGCGACACGGTGGCCACTACATGGTGG
CCCATCTGTATCCCACCTCCACGACCCGCCACCAGACCCTGCTCTGCTACTCCACCGTCA
CCGACCAGTGGACCGCCAGGCCGCTGGTCTCCGCCCCGGACCACCCGCCTTGGGGCGCTC
ACGGCGTCCTCGCCCACGGCGGCCTCCTCTGGTGGATCGACGTCGCCTACGGCATGCTCG
TCTGCAACCCTTTCGCTGCCGACGACGGCCTGCGCCTGCGCTTCATCCCGCTCCCGCTTG
GCTGCCAGATGAAGGCCCTCACCGGGCGCGCCCGCCTCTTCCTCGAAGACATGATGGACC
GCCGACGCATCATCAGGCTCAGCCAGGGCAAGCTGCGCTACGTCGCGATCCAGGTCCAGC
GAATCCCCAAGGATCAGGCCACGGTCTGCATGTTCACGCTTGTCCTCAGGCAGGGGGGCC
AGCATTCCTGGGAACACGAGTACACGGTGACCTTCGCCGACATATGGAGCCACCGCAGCT
ATGCCGATGCCAGACTGCCGTCGGGCGTGGTGCCCTCGCTCGCCTTCGTCGACCCCAACA
ACCCCAACATCCTCTACTTCTTCCTGGACAAGACGCTCTTCGCACTGGACGCACAAGCCA
GGCAGGTCCTGCACCACATGGAGTACTCGTTAGACCCCGATTATTACGGGCAACTCAGGG
TCCGGTACTCCTGCTTCGTTGATGCCTGGGTGCTGCCGCCAACGCTTCTCCGCAAGGGTG
ACAGCCGGTGGACTTATGACGACGACGAAGGAACGGATGGATCTGATTTCGACCAAACAA
CATCTCTGTTGTCCCTGATGGAAATCAAGAGCCAGTTAGACGACGAAGGAACGGATGGAT
CTGATTTCGACCAAACAACATCTCTGTTGTCCCTGATGGAAATCAAGAGCCAGTTAGACG
ACGAAGGAACGGATGGATCTGATTTCGACCAAACAACATCTCTGTTGTCCCAGATGGAAA
TCAAGAGCCAGTCAGACAGGGAGCAGACGACGGCTGCCGATGTGGCAGCTGCCGACTCCG
ATGTGGCAGCTGCCGACTCCGATGAACAAGCTAACAGGGAGCAGACGAAGGCTGCCGATG
TCCCAGCTGCCGACTCCGGTGAACAAGCTAACAGGGAGCAGATGACGGCTGCCGATGTAC
CAACTGCCGACTCCGATGAACAAGATGACCAAGCTGCCGACTGCGATGAACAAGCTAACA
GGGAGCAGACGACGGCTGCCGACTCCGGTGAACAAGATGTCCCAGCTGCCGACTCCGGTG
AACAAGATATCCCAGCTGCCGACTCCGGTGATCAAGATGTCCCAGCTGCCGATTCCGGTG
AACAAGCTAATAGGGAGCAGACCACGGCTGCCGTTGTACCAGCTGCCGACTCCGGTGAAC
AAGATGTCCCAGCTGCAGACTCCGGTGAACAAGATCTCCCAGCTGCCGACTCTGGTGAAC
AAGATATCCCTGCTGCCGACTCTGGTGAACAAGATGTCCCAGCTCCCGATTCCGGTGAAC
AAGCTAAGAGGGAGCAGACCACGGCTGCCGATGTCCCAGATGTCGACTCCGGTGAACATG
ATGTCCCAGCTGCCGACTCCGGTGAACAAGCTAACATGGAGCAAACCACGGCTGCCGATG
TCCCAGCTGCCGACTCCGGTGAACAAGATATCCCAGGCTTCCCAGCTGCCGTCTCCGGTG
AACAAGCTAACAGGGAGCAGACCACGGCTGCCGATATCCCAGCTGCCGACTCCGGTGAAC
AAGATATCCTAGCTGCCGACTCCGGTGAACAAGCTAACAGGGAGCAGACCACGACTGTCG
ATGTCCCACCTGCCGACTCCGGTGAACAAGATGTCCTAGCTGCCTACTCCGATGAACAAG
ATATCCGAGCTGCCGATTTCGGTGAACAAGCTAACAGAGAGCAGACGATGGCTGTCGATG
TCCCAGCTGCCGACTCTGGTGAACAAGCTAACAGGGAGCAGACGACGGCTGCCGATGTCC
TAGCCGCCGACTCCGATGAAGAAGCTGATGTTGAACCATAGATATGCAGCTTCCCTAGTT
GGAGATCGAGGTGCTGCGCTCGTCTCGTGGCTGCTGTCTGAGAAAACATTTTGAACCATA
GATACGCTAGCTAGCTAATAATCGAAATAGAATTCAATTTTGGTTCAA