Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d040638_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:3:55395451:55396215:1 gene:Zm00001d040638 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-H2 finger protein ATL3
Sequence

ATGGGCGTCAGCGACGGCGACGGCAACGGCAACGGCCCCAAGGCGAGCGAGGAGGCGGTC
TCGTGCGAAGGGAGTCCCGAGTATAGGTTGCCGTTCTCCAAGCCGCACGTCCCCAGCCCA
CCGCAGGTGACCGACCCGACGAACTACGCCATGACTGGCAAGATCCTGCTCGCCGCGGCG
GGGGCGTTCGCGGGCGTGCTCCTGGCGCTCGTCGCGCTGCACCTCTACAACAGCACACGG
CGGCGGCGCCTCGGCGGCAACCAGCGGCGGCTGTTCCGGAGCCTGGCCATCGCCGGTGGC
GACGAGGACCGCCGCGACGGTGACGGAGAGGGAGCGCCTCCCCCCCATCGCGGCCTCGAT
TCCGCTGTGCTCGCCGCGATACCGGTCGTGCTGATCGAAGCGGGCGCGGATGCGGGGGGC
GGGGACTGCGCGGTCTGCCTCGCGGAGCTCGAGCCCGGGGAGAAGGCCCGCGCGCTGCCG
CGGTGCGGCCACCGCTTCCACATCGAGTGCATTGGCGCCTGGTTCCGGGGGAACGCCACG
TGCCCGCTCTGCCGCGCCGACGTCGTCGTCGTGGCGCCGGGCGCTATCGTGCCAGCCGAG
GGCGGGGCGCTGTCGGAGGAGGTGCGGATAGACGTGGCCGGGGACGCCGTCGCCGCGACG
CCCAATGGATCCACGGTAGTGCCGGTGATGGGGAGGTTGCATAGCGGCCGGGATCTTGAG
AAAGCCAGGCGGGTCTTTGCTTCCACCCGATTCTCTTCCTTCTGA

Peptide Sequence

PEP ID

Zm00001d040638_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:3:55395451:55396215:1 gene:Zm00001d040638 transcript:Zm00001d040638_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-H2 finger protein ATL3
Sequence

MGVSDGDGNGNGPKASEEAVSCEGSPEYRLPFSKPHVPSPPQVTDPTNYAMTGKILLAAA
GAFAGVLLALVALHLYNSTRRRRLGGNQRRLFRSLAIAGGDEDRRDGDGEGAPPPHRGLD
SAVLAAIPVVLIEAGADAGGGDCAVCLAELEPGEKARALPRCGHRFHIECIGAWFRGNAT
CPLCRADVVVVAPGAIVPAEGGALSEEVRIDVAGDAVAATPNGSTVVPVMGRLHSGRDLE
KARRVFASTRFSSF

Transcript Sequence

Transcript ID

Zm00001d040638_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:55395451:55396215:1 gene:Zm00001d040638 gene_biotype:protein_coding transcript_biotype:protein_coding description:RING-H2 finger protein ATL3
Sequence

ATGGGCGTCAGCGACGGCGACGGCAACGGCAACGGCCCCAAGGCGAGCGAGGAGGCGGTC
TCGTGCGAAGGGAGTCCCGAGTATAGGTTGCCGTTCTCCAAGCCGCACGTCCCCAGCCCA
CCGCAGGTGACCGACCCGACGAACTACGCCATGACTGGCAAGATCCTGCTCGCCGCGGCG
GGGGCGTTCGCGGGCGTGCTCCTGGCGCTCGTCGCGCTGCACCTCTACAACAGCACACGG
CGGCGGCGCCTCGGCGGCAACCAGCGGCGGCTGTTCCGGAGCCTGGCCATCGCCGGTGGC
GACGAGGACCGCCGCGACGGTGACGGAGAGGGAGCGCCTCCCCCCCATCGCGGCCTCGAT
TCCGCTGTGCTCGCCGCGATACCGGTCGTGCTGATCGAAGCGGGCGCGGATGCGGGGGGC
GGGGACTGCGCGGTCTGCCTCGCGGAGCTCGAGCCCGGGGAGAAGGCCCGCGCGCTGCCG
CGGTGCGGCCACCGCTTCCACATCGAGTGCATTGGCGCCTGGTTCCGGGGGAACGCCACG
TGCCCGCTCTGCCGCGCCGACGTCGTCGTCGTGGCGCCGGGCGCTATCGTGCCAGCCGAG
GGCGGGGCGCTGTCGGAGGAGGTGCGGATAGACGTGGCCGGGGACGCCGTCGCCGCGACG
CCCAATGGATCCACGGTAGTGCCGGTGATGGGGAGGTTGCATAGCGGCCGGGATCTTGAG
AAAGCCAGGCGGGTCTTTGCTTCCACCCGATTCTCTTCCTTCTGA