Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d040629_T003
CDS Infomation

cds chromosome:B73_RefGen_v4:3:55076674:55088155:-1 gene:Zm00001d040629 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lysophospholipid acyltransferase LPEAT1
Sequence

ATGGCCCTCGACACCGCCGACGCCGACGCGCCGCGCTTGCGCCTCGATGCCAGCGCCGCC
GTGCACCCGCTCCTCTCCGACGACGGCTCCACGGCCGCGGGGGAGACAGCGGAGCAGCTG
GACGCCAGGTACGCGCCCTACGCGCGCCGGGACGCGTACGGAACCATGGGCCGCGGCCCG
CTGCCCGCGGCGCAGGCGGTGCGGCTGGCGCTGGCCGCCGCCGTGCTCCTCCCGCTCCGC
TTCGTCGCGGGGATGCTCGTGCTCCTGCTCTACTACTTGGTGTGCCGCGCGTGCACGCTG
TTCGTGGATGCAGATGGGGGGCGGCCGAGGTTGGCGGGGTGGAGGAGGAAGGCCGTGCTG
CGATCGGGGTGCGCGCTCTCACGGGCGATGCTCTTCGTCTTCGGGTTCTACTGGATCCGC
GAGACCCGCAGGAGGTCCCCTAATGCTAAGGACCAATTTGAAGAATCACAAAGGCCAGGG
GCAATTGTATCTAATCATGTCTCTTATGTGGATATTCTTTATCACATGTCAGCATCCTTT
CCAAGTTTTGTTGCTAAGGAGTCAGTGTCCAGGTTGCCACTTATTGGTCTCATAAGCAAT
TGTCTTGGATGCATTTTTGTTCAACGAGAATCAAAGTCTTCAGAAGCTAAAGGTGTCTCA
GGTGCTGTAGCTGAAAGGATCCAAGAGGTTTGTCAAGATAAGAATACCCCAATGATGTTG
TTGTTTCCCGAGGGAACTACTACAAATGGGGATTACCTTCTTCCATTTAAGACTGGAGCC
TTTCTTGCAGGTGCACCAGTGCAGCCAGTCATTTTGAAATACCCTTACAGGAGATTTAGT
CCAGCATGGGATTCAATGGATGGAGCACGTCATGTGTTATTGCTGCTCTGTCAATTTATA
AATCACATGGAGGTGGTCCGGTTGCCTGTATACTATCCTTCTCAACTAGAAAAGGAAGAT
CCGAAGCTCTACGCAAATAATGTCAGAAAACTAATAGCAATGGAGGTAGGCTAA

Peptide Sequence

PEP ID

Zm00001d040629_P003
PEP Infomation

pep chromosome:B73_RefGen_v4:3:55076674:55088155:-1 gene:Zm00001d040629 transcript:Zm00001d040629_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lysophospholipid acyltransferase LPEAT1
Sequence

MALDTADADAPRLRLDASAAVHPLLSDDGSTAAGETAEQLDARYAPYARRDAYGTMGRGP
LPAAQAVRLALAAAVLLPLRFVAGMLVLLLYYLVCRACTLFVDADGGRPRLAGWRRKAVL
RSGCALSRAMLFVFGFYWIRETRRRSPNAKDQFEESQRPGAIVSNHVSYVDILYHMSASF
PSFVAKESVSRLPLIGLISNCLGCIFVQRESKSSEAKGVSGAVAERIQEVCQDKNTPMML
LFPEGTTTNGDYLLPFKTGAFLAGAPVQPVILKYPYRRFSPAWDSMDGARHVLLLLCQFI
NHMEVVRLPVYYPSQLEKEDPKLYANNVRKLIAMEVG

Transcript Sequence

Transcript ID

Zm00001d040629_T003
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:55076674:55088155:-1 gene:Zm00001d040629 gene_biotype:protein_coding transcript_biotype:protein_coding description:Lysophospholipid acyltransferase LPEAT1
Sequence

GCCGACCAAACAGGGTCCTCGTCACAGAACACGCGCCCCACCCGTCTCGTCGCGCCGATC
CAGCCCGGCGCTCGGCCCCGCGGCGTGTGCAATGGCCCTCGACACCGCCGACGCCGACGC
GCCGCGCTTGCGCCTCGATGCCAGCGCCGCCGTGCACCCGCTCCTCTCCGACGACGGCTC
CACGGCCGCGGGGGAGACAGCGGAGCAGCTGGACGCCAGGTACGCGCCCTACGCGCGCCG
GGACGCGTACGGAACCATGGGCCGCGGCCCGCTGCCCGCGGCGCAGGCGGTGCGGCTGGC
GCTGGCCGCCGCCGTGCTCCTCCCGCTCCGCTTCGTCGCGGGGATGCTCGTGCTCCTGCT
CTACTACTTGGTGTGCCGCGCGTGCACGCTGTTCGTGGATGCAGATGGGGGGCGGCCGAG
GTTGGCGGGGTGGAGGAGGAAGGCCGTGCTGCGATCGGGGTGCGCGCTCTCACGGGCGAT
GCTCTTCGTCTTCGGGTTCTACTGGATCCGCGAGACCCGCAGGAGGTCCCCTAATGCTAA
GGACCAATTTGAAGAATCACAAAGGCCAGGGGCAATTGTATCTAATCATGTCTCTTATGT
GGATATTCTTTATCACATGTCAGCATCCTTTCCAAGTTTTGTTGCTAAGGAGTCAGTGTC
CAGGTTGCCACTTATTGGTCTCATAAGCAATTGTCTTGGATGCATTTTTGTTCAACGAGA
ATCAAAGTCTTCAGAAGCTAAAGGTGTCTCAGGTGCTGTAGCTGAAAGGATCCAAGAGGT
TTGTCAAGATAAGAATACCCCAATGATGTTGTTGTTTCCCGAGGGAACTACTACAAATGG
GGATTACCTTCTTCCATTTAAGACTGGAGCCTTTCTTGCAGGTGCACCAGTGCAGCCAGT
CATTTTGAAATACCCTTACAGGAGATTTAGTCCAGCATGGGATTCAATGGATGGAGCACG
TCATGTGTTATTGCTGCTCTGTCAATTTATAAATCACATGGAGGTGGTCCGGTTGCCTGT
ATACTATCCTTCTCAACTAGAAAAGGAAGATCCGAAGCTCTACGCAAATAATGTCAGAAA
ACTAATAGCAATGGAGGTAGGCTAAACCCAAAACTGAGTCAAACAACCATGCAAAGATCA
AACAACCTCTTCGTAATATATGTATCCACCGAGGGTTGGAGAGTATGATTGGCCTCCCAC
CTGTAAAGGCCCCAAGAGCTCGAGAAGGCTCGATTCTAATCC