Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d040589_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:3:51740462:51742521:1 gene:Zm00001d040589 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polygalacturonase
Sequence	ATGGAGTTCACCGCCAGGACCGCCATTGCTCTGCTTCTCTCGCTCGCCGTCTCCTCCAGC TTCCTCTGTGGCAGCGTCCAGGGCGGCCGCCACCACCACCACGGGAAGCACGCAAAGCAT AGCTCCGCGCACCCGCCGTCCGCCCACGCTCCGGGCCCGGCGAGCGGGAGGCGGCACGCG CGGCCCGTCTCTCCCCCGGCCCCGCCGCCGTCGTCTGGGTCGGGCGGCTACCCGACGCCC GGCGGCGCGGCGCCGGAGCCAGCACCAGCCCCCGCGGCTGCAGCGGCGGGCGGCACCGTG TACGACGTCGTCAAGGACTTCGGCGCCGTCGGGGACGGCGTGACGGACGACACCGGCGCC ATCAAGACCGCGTGGGACACGGCGTGCCAGGACGACGGGGCCAGCGTCGTGCTGGCCGCC GCCGGGTACTCGTTCCTCGTGCACACCACCGTCTTCACCGGCCCGTGCCAGGGGAGCGTC ACGATTCAGCTCGACGGGACGATCGTGGCGCCGAGCGACCCCGACATGTGGCCGGCCAAC AGCAAGCGCAACTGGCTGCTGTTCTATCAGGCCCACGGCATGTCGCTGCGAGGTGCCGGC CTCATCGACGGCAAGGGCCAGAAGTGGTGGGATCTCCCCTGCAAGTCTCACAAGGGCCAG GGAGGATCAAGCGGCCACGGTGCATCCTGTGACAGCCCAGTGGCGCTGAGGTTTTTCATG ACCAACAACGTGACGGTGCAAGGGCTCAAGGTGCAGAACAGCCCCGAGTTCCACATCCGG TTCGACAGCTGCCGCGGCGTGGTGGCCAGCGGCCTCTCCATCAGCTCCCCGGCGCTGAGC CCCAACACGGACGGCATCCACGTCGAGAACACCCAGGACGTCCTCATCACCAACACCGCC GTCTCCAACGGCGACGACTGCGTCTCCATCGGCGCAGGCACCCTCAACATGCACGTCGAG AACGTCACCTGCGGGCCCGGCGGCCACGGCATCAGCATTGGGAGCCTGGGCAAGCAGGGC TCGCGGGCGTGCGTGGCCAACGTCACGGTGCGCAACGCCGTGATCCGCCACTCCGACAAC GGCGTCCGGATCAAGACGTGGCAGGGCGGCTCCGGCGCCGTCTCCTCCGTGTCCTTCCAG AACGTGCGCATGGACGCGGTGCGGAACCCCATCATCATCGACCAGTACTACTGCCTCTCC AAGAGCTGCGAGAACGCCACCTCGGCCGTCTTCGTCTCCGGCGTCTCCTACGCCGGCATC CGGGGCACCTACGACCCGCGCACCCCGCCCATCCACTTCGGGTGCAGCGACGCCGTGCCG TGCACCAACATCACGCTCTCCGACGTCGAGCTGCTCCCCGCGTCCGGCGAGACCATCGAC GACCCCTTCTGCTGGAACGTGTACGGCAGCACCGCCACGCCTACGGTGCCGCCGGTGCCG TGCCTCATAGAAGGCGTGCCCAGGAACCTCGACGATAACAGCAGCCTCAAATGCTACTAG

Peptide Sequence

PEP ID	Zm00001d040589_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:3:51740462:51742521:1 gene:Zm00001d040589 transcript:Zm00001d040589_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polygalacturonase
Sequence	MEFTARTAIALLLSLAVSSSFLCGSVQGGRHHHHGKHAKHSSAHPPSAHAPGPASGRRHA RPVSPPAPPPSSGSGGYPTPGGAAPEPAPAPAAAAAGGTVYDVVKDFGAVGDGVTDDTGA IKTAWDTACQDDGASVVLAAAGYSFLVHTTVFTGPCQGSVTIQLDGTIVAPSDPDMWPAN SKRNWLLFYQAHGMSLRGAGLIDGKGQKWWDLPCKSHKGQGGSSGHGASCDSPVALRFFM TNNVTVQGLKVQNSPEFHIRFDSCRGVVASGLSISSPALSPNTDGIHVENTQDVLITNTA VSNGDDCVSIGAGTLNMHVENVTCGPGGHGISIGSLGKQGSRACVANVTVRNAVIRHSDN GVRIKTWQGGSGAVSSVSFQNVRMDAVRNPIIIDQYYCLSKSCENATSAVFVSGVSYAGI RGTYDPRTPPIHFGCSDAVPCTNITLSDVELLPASGETIDDPFCWNVYGSTATPTVPPVP CLIEGVPRNLDDNSSLKCY

Transcript Sequence

Transcript ID	Zm00001d040589_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:51740462:51742521:1 gene:Zm00001d040589 gene_biotype:protein_coding transcript_biotype:protein_coding description:Polygalacturonase
Sequence	CGACCCAAGCAAGATTCACCATTCCGGGGCCTCCCATCATTTTGCCCGCAATCCAGAGTT TAGCTCCTCCTCAGCAGCTTAATTGAACGGCCTCTAGTAATACATACAATGGAGTTCACC GCCAGGACCGCCATTGCTCTGCTTCTCTCGCTCGCCGTCTCCTCCAGCTTCCTCTGTGGC AGCGTCCAGGGCGGCCGCCACCACCACCACGGGAAGCACGCAAAGCATAGCTCCGCGCAC CCGCCGTCCGCCCACGCTCCGGGCCCGGCGAGCGGGAGGCGGCACGCGCGGCCCGTCTCT CCCCCGGCCCCGCCGCCGTCGTCTGGGTCGGGCGGCTACCCGACGCCCGGCGGCGCGGCG CCGGAGCCAGCACCAGCCCCCGCGGCTGCAGCGGCGGGCGGCACCGTGTACGACGTCGTC AAGGACTTCGGCGCCGTCGGGGACGGCGTGACGGACGACACCGGCGCCATCAAGACCGCG TGGGACACGGCGTGCCAGGACGACGGGGCCAGCGTCGTGCTGGCCGCCGCCGGGTACTCG TTCCTCGTGCACACCACCGTCTTCACCGGCCCGTGCCAGGGGAGCGTCACGATTCAGCTC GACGGGACGATCGTGGCGCCGAGCGACCCCGACATGTGGCCGGCCAACAGCAAGCGCAAC TGGCTGCTGTTCTATCAGGCCCACGGCATGTCGCTGCGAGGTGCCGGCCTCATCGACGGC AAGGGCCAGAAGTGGTGGGATCTCCCCTGCAAGTCTCACAAGGGCCAGGGAGGATCAAGC GGCCACGGTGCATCCTGTGACAGCCCAGTGGCGCTGAGGTTTTTCATGACCAACAACGTG ACGGTGCAAGGGCTCAAGGTGCAGAACAGCCCCGAGTTCCACATCCGGTTCGACAGCTGC CGCGGCGTGGTGGCCAGCGGCCTCTCCATCAGCTCCCCGGCGCTGAGCCCCAACACGGAC GGCATCCACGTCGAGAACACCCAGGACGTCCTCATCACCAACACCGCCGTCTCCAACGGC GACGACTGCGTCTCCATCGGCGCAGGCACCCTCAACATGCACGTCGAGAACGTCACCTGC GGGCCCGGCGGCCACGGCATCAGCATTGGGAGCCTGGGCAAGCAGGGCTCGCGGGCGTGC GTGGCCAACGTCACGGTGCGCAACGCCGTGATCCGCCACTCCGACAACGGCGTCCGGATC AAGACGTGGCAGGGCGGCTCCGGCGCCGTCTCCTCCGTGTCCTTCCAGAACGTGCGCATG GACGCGGTGCGGAACCCCATCATCATCGACCAGTACTACTGCCTCTCCAAGAGCTGCGAG AACGCCACCTCGGCCGTCTTCGTCTCCGGCGTCTCCTACGCCGGCATCCGGGGCACCTAC GACCCGCGCACCCCGCCCATCCACTTCGGGTGCAGCGACGCCGTGCCGTGCACCAACATC ACGCTCTCCGACGTCGAGCTGCTCCCCGCGTCCGGCGAGACCATCGACGACCCCTTCTGC TGGAACGTGTACGGCAGCACCGCCACGCCTACGGTGCCGCCGGTGCCGTGCCTCATAGAA GGCGTGCCCAGGAACCTCGACGATAACAGCAGCCTCAAATGCTACTAGCAGCCTCAAATG CTACCTTCCTGCTACTTGTTCATTATATTAGAAGAAGGAAGAAGGCAAACCAACAGAGAA AAGTAATCAAGATTAGTGCAGATAAAACGGAGTTTAACGCGTGATTACTTATGTATATAT AGAAAAAGATGATAGTACTAGTAACAAGTGATTTGTGTGACAATTATACATATAGTATTA CCAGAATATATACATGGTTTTCAACTTTAAT