Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d040555_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:3:49418717:49420159:-1 gene:Zm00001d040555 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Zea CEFD homolog1 description: Zea CEFD homolog1
Sequence

ATGGCGTCGGACCCGGCCCCTGACGACGCGGCCGCGGCCGTGAATGGGCACGGCAACGAC
AACGGACACGGTAACGGCCCGTCCCCGTCGAAGCGCCCCCGGGCGGTGATCTCGGAAGCC
GAGATCCGCGTCGAGTTCGCACACCACGACGCAGCCGTGGCGCGCGTCAACAACGGCAGC
TTCGGCTGCTGCCCGGCCTCGGTCCTCGCCGCGCAGGCCCACTGGCAGCGCCTCTTCCTC
GCGCAGCCCGACGCCTTCTACTTCCACGTTCTCCAGCAGGGCCTTCTCCGCTCGCGCGCC
GCCGTCGCCGAGGTGGTGGGCGCTGGCGACGTCTCCGAGGTCTCCCTCGTCGATAACGCC
ACCACGGCCGCCGCCATCGTCCTGCAGCACGCAGCCTGGAGCTTCGCCGAGGGTCACTTC
GCGCGCGGGGATGCGGTGCTGATGCTCCACTACGCCTATGGTGCGGTCAAGAAGTCCATC
CACGCGTACGTCGCGCGTGCGGGGGCCACCGTCGTCGAGGTGCCCCTCCCATTCCCCGTC
GCGTCCGCCGACGCAATCATTGCCGAGTTCCGTGCTGCGCTCGCGGTCGCCAAGGAAGGA
GGGCGTAGGGTCAGGCTCGCAGTCATCGACCACATTACCTCCATGCCCAGTGTCGTCATC
CCAGTCAAGGAGCTCGTCGCCATCTGTCGAGAAGAGGGCGTTGACAAGGTATTTGTTGAC
GCTGCCCACTCTATTGGGCAGGTGCCTGTGGACGTGCGCGACATTGGAGCCGATTTCTAT
ACAAGCAACCTTCATAAGTGGTTCTTTTGCCCCCCTGCTGTGGCCTTTTTGCATACTCGC
AAGGATGACCCGATAGCCTCCCAACTCCATCACCCTGTTGTTTCCCATGAGTATGGGAAT
GGGCTGCCTATGGAGAGCGGATGGATTGGAACACGGGATTACAGTGCCCAGCTTGTTGTG
TCCGAGGCTATAGATTTTGTGAATCGATTTGAGGGTGGAATTGAGGCTATACGAAACCGG
AATCATGAGAAAGTTATTGAGATGGGTAGGATGCTTGCTGAGGCATGGGGGACTTTTCTT
GGCTCACCTCCGGAACTGTGTGGTAGCATGGTTATGGTGGGGATGCCTGGTTGCCTTGGT
GTTGAGAGTGATGATGATGCAATGAGAGTGAGGACAATGTTGAGAAAGGATTTCCAGGTG
GAGGTGCCGGTATACTACAACTCAAGAAGGGTGGAAGGACAGGAGATGACAAAGGATAAA
AATGGTGATCCAGTGACAGGGTATGTGAGGATCTCACACCAGGTTTACAATGTCACAGAG
GACTATGAGAGACTGAGGGATGTTGTCAATAAACTTGTTTCTGAAGGGTTCACCAGCAGC
AAGTTGCGGCCTTCTGAGAAGGTACACTCTCAGCTGAAAATACTTGCATATTTAGTCCCT
TAA

Peptide Sequence

PEP ID

Zm00001d040555_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:3:49418717:49420159:-1 gene:Zm00001d040555 transcript:Zm00001d040555_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Zea CEFD homolog1 description: Zea CEFD homolog1
Sequence

MASDPAPDDAAAAVNGHGNDNGHGNGPSPSKRPRAVISEAEIRVEFAHHDAAVARVNNGS
FGCCPASVLAAQAHWQRLFLAQPDAFYFHVLQQGLLRSRAAVAEVVGAGDVSEVSLVDNA
TTAAAIVLQHAAWSFAEGHFARGDAVLMLHYAYGAVKKSIHAYVARAGATVVEVPLPFPV
ASADAIIAEFRAALAVAKEGGRRVRLAVIDHITSMPSVVIPVKELVAICREEGVDKVFVD
AAHSIGQVPVDVRDIGADFYTSNLHKWFFCPPAVAFLHTRKDDPIASQLHHPVVSHEYGN
GLPMESGWIGTRDYSAQLVVSEAIDFVNRFEGGIEAIRNRNHEKVIEMGRMLAEAWGTFL
GSPPELCGSMVMVGMPGCLGVESDDDAMRVRTMLRKDFQVEVPVYYNSRRVEGQEMTKDK
NGDPVTGYVRISHQVYNVTEDYERLRDVVNKLVSEGFTSSKLRPSEKVHSQLKILAYLVP

Transcript Sequence

Transcript ID

Zm00001d040555_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:49418717:49420159:-1 gene:Zm00001d040555 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Zea CEFD homolog1 description: Zea CEFD homolog1
Sequence

ATGGCGTCGGACCCGGCCCCTGACGACGCGGCCGCGGCCGTGAATGGGCACGGCAACGAC
AACGGACACGGTAACGGCCCGTCCCCGTCGAAGCGCCCCCGGGCGGTGATCTCGGAAGCC
GAGATCCGCGTCGAGTTCGCACACCACGACGCAGCCGTGGCGCGCGTCAACAACGGCAGC
TTCGGCTGCTGCCCGGCCTCGGTCCTCGCCGCGCAGGCCCACTGGCAGCGCCTCTTCCTC
GCGCAGCCCGACGCCTTCTACTTCCACGTTCTCCAGCAGGGCCTTCTCCGCTCGCGCGCC
GCCGTCGCCGAGGTGGTGGGCGCTGGCGACGTCTCCGAGGTCTCCCTCGTCGATAACGCC
ACCACGGCCGCCGCCATCGTCCTGCAGCACGCAGCCTGGAGCTTCGCCGAGGGTCACTTC
GCGCGCGGGGATGCGGTGCTGATGCTCCACTACGCCTATGGTGCGGTCAAGAAGTCCATC
CACGCGTACGTCGCGCGTGCGGGGGCCACCGTCGTCGAGGTGCCCCTCCCATTCCCCGTC
GCGTCCGCCGACGCAATCATTGCCGAGTTCCGTGCTGCGCTCGCGGTCGCCAAGGAAGGA
GGGCGTAGGGTCAGGCTCGCAGTCATCGACCACATTACCTCCATGCCCAGTGTCGTCATC
CCAGTCAAGGAGCTCGTCGCCATCTGTCGAGAAGAGGGCGTTGACAAGGTATTTGTTGAC
GCTGCCCACTCTATTGGGCAGGTGCCTGTGGACGTGCGCGACATTGGAGCCGATTTCTAT
ACAAGCAACCTTCATAAGTGGTTCTTTTGCCCCCCTGCTGTGGCCTTTTTGCATACTCGC
AAGGATGACCCGATAGCCTCCCAACTCCATCACCCTGTTGTTTCCCATGAGTATGGGAAT
GGGCTGCCTATGGAGAGCGGATGGATTGGAACACGGGATTACAGTGCCCAGCTTGTTGTG
TCCGAGGCTATAGATTTTGTGAATCGATTTGAGGGTGGAATTGAGGCTATACGAAACCGG
AATCATGAGAAAGTTATTGAGATGGGTAGGATGCTTGCTGAGGCATGGGGGACTTTTCTT
GGCTCACCTCCGGAACTGTGTGGTAGCATGGTTATGGTGGGGATGCCTGGTTGCCTTGGT
GTTGAGAGTGATGATGATGCAATGAGAGTGAGGACAATGTTGAGAAAGGATTTCCAGGTG
GAGGTGCCGGTATACTACAACTCAAGAAGGGTGGAAGGACAGGAGATGACAAAGGATAAA
AATGGTGATCCAGTGACAGGGTATGTGAGGATCTCACACCAGGTTTACAATGTCACAGAG
GACTATGAGAGACTGAGGGATGTTGTCAATAAACTTGTTTCTGAAGGGTTCACCAGCAGC
AAGTTGCGGCCTTCTGAGAAGGTACACTCTCAGCTGAAAATACTTGCATATTTAGTCCCT
TAA