Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d040536_T004
CDS Infomation	cds chromosome:B73_RefGen_v4:3:48598935:48602106:-1 gene:Zm00001d040536 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:bHLH-transcription factor 68 description:Transcription factor PIF4
Sequence	ATGTCCGACAGCAACGACTTCGTCGAGCTGCTATGGGAGAACGGCCAGGCGGTGGTGCAC GGGAGGAGGAAGCAGCATCCCCAGGCCGCCTTCCCGCCCTTCACCTGCGGCGCGGCCAGC AGCAGTAGAGCTCAAGAAAACCAGCCGGGTACTACCGACCCGGTCTCGCTGTTCAAGACG GGAGGCCTCTTCGCCGACTTCTCGTCCGGCCTAGACGCCGCCCGTGGCAACGGTGACCTT GACGACACCGTGCCCTGGATCCACTGCCCCATCGTCGAGGAAGACAGCGCCGCACCCGCA CCTGCCCTCGCGGAGGGCTACAGCCCAGATTTCTTCTCGGAGCTCCATGCAGCGGCGTTA GCAGCGGCGGCGGCAGAGACGAACCTCAGCCCTCTGCCACCACCGGTCCAGCACAACAGA AGCACCCCGGTTGCCACCACCAGCAGAGGACCAGAACCCTCGAAGGAAGCCCCGCGCATA CCAGTACCAGGTCCAGGCAGCAGGCCCGAGCCACAATCTGAGTTCGCGGCCACCAGGAAA CCTCGGCCGGAGAGCGGTGGAGAGGGATTGATGAACTTCTCCCTCTTCTCTAGGCCTGCA GCCTTGGTCCGGGCAAGCCTACAGAGGCCACCGCCACCGCAGACAGGCACTGACAAGGTG TCCAATGTCACCACGAGCACCCGCGTGGAGTCGACGGTTCTACAGTCGGCTAGTGGGCCA AGAATCGCCCCTGTGTTCACGGACCAGAGGACGGCGTGGTCACAATCCAAGGAGGTGCGG TTTTCATGCGCACCAGCGCTGGCGGCTGGTAACCTGCACCAGGATATGCCTCTGGGAAGA CCTGGCAACAACATGACTCCCCAGGGGAAAATGGAGACCAAAAAGGCTTGTGAGGTTGCA GTCGCTACTCCATCGCTCTGCTCCGGCAATGGCGAGTCCTGGCGCGAACAAAAGAGGAAG AGTCAGGCCGAATGTTCTGCAAGTCAAGACGATGATCTTGATGATGAGTCCGGTGGGATG CGAGGATCAGGCGGCAGAGGTACGAAGCGCAGCCGCACCGCGGAGGTGCACAATTTGTCC GAAAGGAGGAGAAGGGACAGGATCAATGAGAAAATGCGCGCCCTGCAAGAGCTCATCCCC AACTGCAACAAGGTACGACGATCCATTTCTACCATCTTTTAA

Peptide Sequence

PEP ID	Zm00001d040536_P004
PEP Infomation	pep chromosome:B73_RefGen_v4:3:48598935:48602106:-1 gene:Zm00001d040536 transcript:Zm00001d040536_T004 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:bHLH-transcription factor 68 description:Transcription factor PIF4
Sequence	MSDSNDFVELLWENGQAVVHGRRKQHPQAAFPPFTCGAASSSRAQENQPGTTDPVSLFKT GGLFADFSSGLDAARGNGDLDDTVPWIHCPIVEEDSAAPAPALAEGYSPDFFSELHAAAL AAAAAETNLSPLPPPVQHNRSTPVATTSRGPEPSKEAPRIPVPGPGSRPEPQSEFAATRK PRPESGGEGLMNFSLFSRPAALVRASLQRPPPPQTGTDKVSNVTTSTRVESTVLQSASGP RIAPVFTDQRTAWSQSKEVRFSCAPALAAGNLHQDMPLGRPGNNMTPQGKMETKKACEVA VATPSLCSGNGESWREQKRKSQAECSASQDDDLDDESGGMRGSGGRGTKRSRTAEVHNLS ERRRRDRINEKMRALQELIPNCNKVRRSISTIF

Transcript Sequence

Transcript ID	Zm00001d040536_T004
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:48598935:48602106:-1 gene:Zm00001d040536 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:bHLH-transcription factor 68 description:Transcription factor PIF4
Sequence	AGAGGCAAAGCCGTTAGCCAATCTGCTGTTGCGTGTTGCACCGATCAACGTCGGTTCCCA GCGCTTGCTCGTCAAGCGTGTCCTGCTGCTGTTCTCTGCTCCTGCTTGCCGCGAGAGCTC CTCTCGCTCATCTACCCAAGGTCCTCTCGGCGCCGAGATGTCCGACAGCAACGACTTCGT CGAGCTGCTATGGGAGAACGGCCAGGCGGTGGTGCACGGGAGGAGGAAGCAGCATCCCCA GGCCGCCTTCCCGCCCTTCACCTGCGGCGCGGCCAGCAGCAGTAGAGCTCAAGAAAACCA GCCGGGTACTACCGACCCGGTCTCGCTGTTCAAGACGGGAGGCCTCTTCGCCGACTTCTC GTCCGGCCTAGACGCCGCCCGTGGCAACGGTGACCTTGACGACACCGTGCCCTGGATCCA CTGCCCCATCGTCGAGGAAGACAGCGCCGCACCCGCACCTGCCCTCGCGGAGGGCTACAG CCCAGATTTCTTCTCGGAGCTCCATGCAGCGGCGTTAGCAGCGGCGGCGGCAGAGACGAA CCTCAGCCCTCTGCCACCACCGGTCCAGCACAACAGAAGCACCCCGGTTGCCACCACCAG CAGAGGACCAGAACCCTCGAAGGAAGCCCCGCGCATACCAGTACCAGGTCCAGGCAGCAG GCCCGAGCCACAATCTGAGTTCGCGGCCACCAGGAAACCTCGGCCGGAGAGCGGTGGAGA GGGATTGATGAACTTCTCCCTCTTCTCTAGGCCTGCAGCCTTGGTCCGGGCAAGCCTACA GAGGCCACCGCCACCGCAGACAGGCACTGACAAGGTGTCCAATGTCACCACGAGCACCCG CGTGGAGTCGACGGTTCTACAGTCGGCTAGTGGGCCAAGAATCGCCCCTGTGTTCACGGA CCAGAGGACGGCGTGGTCACAATCCAAGGAGGTGCGGTTTTCATGCGCACCAGCGCTGGC GGCTGGTAACCTGCACCAGGATATGCCTCTGGGAAGACCTGGCAACAACATGACTCCCCA GGGGAAAATGGAGACCAAAAAGGCTTGTGAGGTTGCAGTCGCTACTCCATCGCTCTGCTC CGGCAATGGCGAGTCCTGGCGCGAACAAAAGAGGAAGAGTCAGGCCGAATGTTCTGCAAG TCAAGACGATGATCTTGATGATGAGTCCGGTGGGATGCGAGGATCAGGCGGCAGAGGTAC GAAGCGCAGCCGCACCGCGGAGGTGCACAATTTGTCCGAAAGGAGGAGAAGGGACAGGAT CAATGAGAAAATGCGCGCCCTGCAAGAGCTCATCCCCAACTGCAACAAGGTACGACGATC CATTTCTACCATCTTTTAATTAGGCCCCGTTTGATCTGATTAGTCCCTCTATTTTAGTCA CATTTAGTCCATAAATTACCAAATGGTAGGACTTAAACAGAGACTAAATTGTTCTAGTCT CTTAAGAGGTGACTAAAAAAACTAAACCATATAAATTCTACCTTTTGCCCTTCCTTTATT TCAGTTGCACTAACGACGGGCGAATGCTACGAGGTATTTTGGTTCTCTTATGATTCATTT AATCTGTTTTAAATACTTTTAGTTACTAAAACTAAACAGTGTTGTTTTAAATACTTTTAG TTACTAAAACTAAACAGTGTAGAGACTAAAAATTTAGTCTCCTAACTAAACTTTAGTCCC TGTACTAAAGTAACCAAACAACCCCTTACTTATCCGACACTTTTGAATCCCTAGGCATTT GGTAAATCGGTAGCAACAGATGCATCACCTTTCTTGCAGATTGACAAAGCCTCCATGCTG GATGAAGCGATCGAGTACCTCAAAACCCTCCAGCTTCAAGTTCAGATGATGGCCATGGGA AGTGGACTGTGCATTCCTCCCATGCTGCTGCCGCGAGCCATGCAGCTGCAAATTCCTTCA ATTGCTCATTTCCATCATCTCGGCATGGGATTGGGTTATGGGATGGGTGTCCTCGATATG AACAGCACAGCGGCAGTTCCATTTCAGCCCATCCCTGGTGCTCACTATACTTGTCCGATG ATCCCAGGCACGCCACCACAAGGTCTTGGAATTGGAATGCCTGGCACAAACACGATGCCA GTGTTTGGACTCCCTGGGCAAGCAATCCATCCCTCAGCGTCTAGCGTACAGCCATTCCCA TCGTTGGCGGGTCTTCCTGTTAGGCCAAACCTGGCACCTCAAGTCCCAGCCGTCATGGCT AACATGGTGCAGGAGCAACAGCAAGGCGTAGCGACTCAGCAGCAGCAGAGTCTGAATAAT GAAGCTCAACAGAAAGCAAATACCGGAGATCCACAAATACTACAAAAATAGATGAAGAGA TCTTCGCCAGTAATCAGTTTCTGGATGGTGGTGGCAACAGGACTAATACTATAGGGAGAA ATGAGGCTGAAACATAAAAACGGTCAGCAAGTGCCAGTGTGTAACCTGACTCGAGCTAAA CTTGACACAAATCATGGAACTTGGCAGAGCGTTATTATCCTAATAGATAACATGGCTGAT GATTTTCAGGTCTCGACTAACAAGCTGCAGGTGTGAATATCAGCACCAACTCATCATGGA AGAGCTTAACGAGTTTCATGATTCACGAAGCAGATCTATCACTTGAAAAAGGTCCAATCA ATCAAGATGGATTTGGTGGCGGGATGTCTAGCTTAGCGAGCTAAGATGCTCCAAAGTTTT GTGTAAAATGTAGATGGAACCTTGTTACAAGTAACATTTCTTGGCAGCGATGCCGTTTTC AGGTGTTTTTTTTTTTTGTTGCTTCACTGAAGTTTTCTTGAGTCAATATATCTTATTTTC C