Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d040475_T001
CDS Infomation	cds chromosome:B73_RefGen_v4:3:45714344:45718276:1 gene:Zm00001d040475 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein mitochondrial
Sequence	ATGTGGGCTCTCCGCCGAGCTGGTAACCCCCTCAGGTTCCATGCCCAAAAAGTTGTGAGT CCCCGTGGTTGTGCGAGCCTTGAGGTGCTGCTAACTGCTGATGCAAAAAATGTTGAAGAA CACCATGAGGCAGACTGTCAGAAAGTGTGCTACTGTCATAAGCCAAAGCCACCATCCTTC TTATTGTCATTTTCATCTGGCCAATTTGCTTGGAGTAGGGGTTTCTCCTCTCAGCCAGGT GCAAATTCTAGTGACAAGGATGATGAGTTAGAGGATGTATTTTCTGATCTCAATGTTCCA CCAGAAGCTGGTAAAAAGGATGCTGGGTTGACATCTGAAGATACTTCTGATGAGGATGCC ACTGATGAAATTGGCTTGCCTAGTATGGATGCTGATGCAAAACCTGAGACGGAGCACATT AAAAGGACTTTTGGTTCCACCCTTCTCAAGACTGTGTTGGAAGCTCCAAGGCATCAAGTC ACTTCAGCGCTTGAGAAATGGGCAAAGGATGGCAATGCACTTGATAGGGGCGAACTCTAT TATGTGCTCCTTAATCTTCGAAAGCGGAAGTGGTACCACAAAGCCTTGGAGCTTGTTGAA TATGTTCAAAATTCACAACTGCTCGAACTCGGAGAGCGTGATTATGCTGCACGCGTTGAT TTAACAGCTAAGGTTTATGGTCTACATAAAGCAGAACAGTATATCGAGAAAATTCCTGCA TCTCATAGGAGTGAGGTTGTGTATAGAACACTTCTGGCGAATTGTGTTGCTGAAGGCAAT GTAAAAAAATCGGAGCAAGTTTTTAATAGGATGAAGGATCTTGGATTCCCAGTTACAACA TTTTCTTCCAATCAGCTTCTGCTACTCTACAAAAGATTGGACAAGAAAAAGATTGCTGAT GTTCTCACAATGATGGAAAAGGAGGATGTGAAACCATCTATCTTTACTTACAAGGTCCTT GTAGACGCCAAGGGAATGGTTGGAGATGTAGAAGCTATGGAGAAAGTGGTTGAATCAATG GTGAAAGATGGCATTGAGCCAGATCTCACGTTTAATGCTACAATTGCCAGACAGTACATA TTTAATGGTCAGCGTGATAAAGCAGAGACACTTTTGGAGTCAATGGAGGGTGATGATATC CAGAAAAACCGTGCTGCTTGCAAGTTTCTATTACCTTTATATGCTTTTCTGGGCAATGGT GATGCTGTGGAAAGAATTTGGAAGGTGTGTGAGGATAATACTCGTATAGATGAGTGCTTG TCTGCTATAGATGCCTTCGGTAAGCTTGGTAATGTTGAAAAGGCAGAGAAGGTTTTTGAG GATATGTTTGTGAAATGGAAAAACCTCTCTTCCAAATACTACACCGCTTTGCTAAAGGTG TATGCTAATCAGAACCTCTTAGACAAGGGTGAGGAACTAGCAAAGCGGATGGATGAGGAG GGTGCCAAGTTTGGGACCCCAACTTTGAATGCACTTGTGAAGCTATATGCTGACGCTGGA GAGGTGGAGAAAGCTGAGTCCCTATTGCACAAGCTATCTCTGAAGAACAACGTCAAGCCC AGTTACAGCTCATACATGACACTGCTTGATAGCTACTCGAAGAAAGGAGACGTCCACAAC TCGGAGAAAGTGTTCAACAAGTTGAGACAGATAGGCTACACTGGGAGGATCAGGATGTAC CAGTTTCTGCTCCATTCTTATCTACATGCTAAGGCCCCTGCGTATGGATTCAAAGAGAGG ATGAAGGCTGACAACATTTTCCCCAACAGTGCCGTGGCAACTCTGATTGCCGCTACTGAT CCGTTCGTCAAGAAGAAATCAGTATCGGACTTGCTCGATTAG

Peptide Sequence

PEP ID	Zm00001d040475_P001
PEP Infomation	pep chromosome:B73_RefGen_v4:3:45714344:45718276:1 gene:Zm00001d040475 transcript:Zm00001d040475_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein mitochondrial
Sequence	MWALRRAGNPLRFHAQKVVSPRGCASLEVLLTADAKNVEEHHEADCQKVCYCHKPKPPSF LLSFSSGQFAWSRGFSSQPGANSSDKDDELEDVFSDLNVPPEAGKKDAGLTSEDTSDEDA TDEIGLPSMDADAKPETEHIKRTFGSTLLKTVLEAPRHQVTSALEKWAKDGNALDRGELY YVLLNLRKRKWYHKALELVEYVQNSQLLELGERDYAARVDLTAKVYGLHKAEQYIEKIPA SHRSEVVYRTLLANCVAEGNVKKSEQVFNRMKDLGFPVTTFSSNQLLLLYKRLDKKKIAD VLTMMEKEDVKPSIFTYKVLVDAKGMVGDVEAMEKVVESMVKDGIEPDLTFNATIARQYI FNGQRDKAETLLESMEGDDIQKNRAACKFLLPLYAFLGNGDAVERIWKVCEDNTRIDECL SAIDAFGKLGNVEKAEKVFEDMFVKWKNLSSKYYTALLKVYANQNLLDKGEELAKRMDEE GAKFGTPTLNALVKLYADAGEVEKAESLLHKLSLKNNVKPSYSSYMTLLDSYSKKGDVHN SEKVFNKLRQIGYTGRIRMYQFLLHSYLHAKAPAYGFKERMKADNIFPNSAVATLIAATD PFVKKKSVSDLLD

Transcript Sequence

Transcript ID	Zm00001d040475_T001
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:45714344:45718276:1 gene:Zm00001d040475 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat-containing protein mitochondrial
Sequence	GCCCGCTAGGGTTTTAGTGTTTTAGCCTCCTGCGTCCCTCCCCTGTTCCCTCAACGCTTC TCTCCTCCACCTCTTCTCGACAGCCGCTGCCACCCGGAACCTTCTCGCAGCGACGCTATG TGGGCTCTCCGCCGAGCTGGTAACCCCCTCAGGTTCCATGCCCAAAAAGTTGTGAGTCCC CGTGGTTGTGCGAGCCTTGAGGTGCTGCTAACTGCTGATGCAAAAAATGTTGAAGAACAC CATGAGGCAGACTGTCAGAAAGTGTGCTACTGTCATAAGCCAAAGCCACCATCCTTCTTA TTGTCATTTTCATCTGGCCAATTTGCTTGGAGTAGGGGTTTCTCCTCTCAGCCAGGTGCA AATTCTAGTGACAAGGATGATGAGTTAGAGGATGTATTTTCTGATCTCAATGTTCCACCA GAAGCTGGTAAAAAGGATGCTGGGTTGACATCTGAAGATACTTCTGATGAGGATGCCACT GATGAAATTGGCTTGCCTAGTATGGATGCTGATGCAAAACCTGAGACGGAGCACATTAAA AGGACTTTTGGTTCCACCCTTCTCAAGACTGTGTTGGAAGCTCCAAGGCATCAAGTCACT TCAGCGCTTGAGAAATGGGCAAAGGATGGCAATGCACTTGATAGGGGCGAACTCTATTAT GTGCTCCTTAATCTTCGAAAGCGGAAGTGGTACCACAAAGCCTTGGAGCTTGTTGAATAT GTTCAAAATTCACAACTGCTCGAACTCGGAGAGCGTGATTATGCTGCACGCGTTGATTTA ACAGCTAAGGTTTATGGTCTACATAAAGCAGAACAGTATATCGAGAAAATTCCTGCATCT CATAGGAGTGAGGTTGTGTATAGAACACTTCTGGCGAATTGTGTTGCTGAAGGCAATGTA AAAAAATCGGAGCAAGTTTTTAATAGGATGAAGGATCTTGGATTCCCAGTTACAACATTT TCTTCCAATCAGCTTCTGCTACTCTACAAAAGATTGGACAAGAAAAAGATTGCTGATGTT CTCACAATGATGGAAAAGGAGGATGTGAAACCATCTATCTTTACTTACAAGGTCCTTGTA GACGCCAAGGGAATGGTTGGAGATGTAGAAGCTATGGAGAAAGTGGTTGAATCAATGGTG AAAGATGGCATTGAGCCAGATCTCACGTTTAATGCTACAATTGCCAGACAGTACATATTT AATGGTCAGCGTGATAAAGCAGAGACACTTTTGGAGTCAATGGAGGGTGATGATATCCAG AAAAACCGTGCTGCTTGCAAGTTTCTATTACCTTTATATGCTTTTCTGGGCAATGGTGAT GCTGTGGAAAGAATTTGGAAGGTGTGTGAGGATAATACTCGTATAGATGAGTGCTTGTCT GCTATAGATGCCTTCGGTAAGCTTGGTAATGTTGAAAAGGCAGAGAAGGTTTTTGAGGAT ATGTTTGTGAAATGGAAAAACCTCTCTTCCAAATACTACACCGCTTTGCTAAAGGTGTAT GCTAATCAGAACCTCTTAGACAAGGGTGAGGAACTAGCAAAGCGGATGGATGAGGAGGGT GCCAAGTTTGGGACCCCAACTTTGAATGCACTTGTGAAGCTATATGCTGACGCTGGAGAG GTGGAGAAAGCTGAGTCCCTATTGCACAAGCTATCTCTGAAGAACAACGTCAAGCCCAGT TACAGCTCATACATGACACTGCTTGATAGCTACTCGAAGAAAGGAGACGTCCACAACTCG GAGAAAGTGTTCAACAAGTTGAGACAGATAGGCTACACTGGGAGGATCAGGATGTACCAG TTTCTGCTCCATTCTTATCTACATGCTAAGGCCCCTGCGTATGGATTCAAAGAGAGGATG AAGGCTGACAACATTTTCCCCAACAGTGCCGTGGCAACTCTGATTGCCGCTACTGATCCG TTCGTCAAGAAGAAATCAGTATCGGACTTGCTCGATTAGATTATGGAGTAGTGTGAGGTA CTGAGGTCCATCATGTTGCTATGCGCATGTGCTGTTTCGATAAGACTGAGTAGTGTGAGA ATATATGGTGAGATAATAACGTCTTAGTCTTGTAATGAACTACCATTGACTTTGCATTTA GACTCATGCGCTTTGCTGAACTTGTGAGTCATAGAAACAGGATAAAGTGCACTAGAGAAC TTGTGCTAATTCTTGATATAATATTTTTTGTTATCCATTTCATTTATCCAGTAGAATCAA GATGAGCCTTCGCAAATCCTTTTGCGATTCCAAAT