Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d040468_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:3:45120037:45134869:-1 gene:Zm00001d040468 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:major facilitator superfamily defense1 description: major facilitator superfamily defense1
Sequence

ATGTCCGGCGGCGAGAGTGGTCCGGCAGCGGCGGCGGCGGCCGTTCCGTTGCTGCAGGCG
CCGGAGGGGAGGACGACGAAGTACTACGAGGGATGCCCCGGGTGCCGGCTGGACGAGGCC
AACAAGACTAGGACCGGCGTCCCCTACCTCAATTTCTTCTACATCTGGGTCGTCTGCCTC
GCCGCCGCACTGCCGGTCCAGTCACTGTTCCCTTATCTATACTTCATGATCAGGGACTTG
AAAGTGGCGAAAGAGGAGCAAGACATTGGGTTTTATGCTGGTTTTGTTGGGGCTACCTAT
TTCCTTGGAAGGGCCATCAGCGCCGTGCCATGGGGCATGTTCGCTGACAAGTATGGAAGG
AAGCCATGCATTGTGATCAGCATCCTCTCAGTGATTGTGTTCAACACACTGTTTGGACTT
AGCACAACTTACTGGATGGCAATTGTGACTAGGGGATTACTTGGGTTGCTATGTGGCATA
CTTGGACCCATCAAGGCCTATGCTTCAGAAGTCTGCAGGAAAGAGCACCAAGCTCTGGGA
ATCTCTCTTGTTACATCTTCACGAGCCATAGCTCTTGTTATTGGGCCTGCTATTGGAGGC
TTCCTTGCACAGCCTGCACAGAAGTACCCAAATCTTTTCTCTGAAGAGTCCATATTTGGA
AGGTTTCCATACTTCCTTCCTTGCTTTGTAATATCGTTGCTAGCAGCAGGATCATGTATT
GCATGCATTTGGCTTCCGGAAACGCTACACTTTCATGGTGATGACAAAGTAGAAGCTATT
GAAGAACTGGAGGCACAAGTTCGTGGCTCCGAATCTACAAAAGATCTGCATAAGAATTGG
CAATTGATGTCAGCAATAATCCTCTACTGTGTCTTTTCTATGCATGACACAGCTTATCTT
GAGGTATTTTCACTGTGGGCTGTGAGCAGTAGAAAATTTCGGGGGCTTAGTTTGACATCC
CAGGATGTTGGTACTGTGCTAGCCATCTCAGGTTTTGGTGTACTTGTATACCAACTCGCT
ATTTATCCTTTTCTTGCGAAGTATTTTGGACCAATCAAGACATTTCGGCCTGCCGCGATC
CTGTCGATCATTCTCCTCACTACGTACCCCTTCATGGCCAATTTACATGGCCTGGAGCTT
AAAATACTCATCAACATTGCATCTGTTTTGAAGAACATGTTTGCGACGCAAGAGCAGAGA
GGCGTTGCTAATGGCATCTCTGTTACCCTGATGTCCGTGTTCAAATCTGTAGCTCCAGCA
GCAGCAGGAATTCTGTTCTCGTGGGCTCAGAAGCACATCAGCGGACTGTTCTTACCAGGG
GATCAGATCTTGTTCCTAGCGATAAACATGGTGTCGGTGATTGGCCTGGTGCTGACGTTC
AAGCCATTTTTCTCCCTACCGAATCCAACGAGGCATTCATAA

Peptide Sequence

PEP ID

Zm00001d040468_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:3:45120037:45134869:-1 gene:Zm00001d040468 transcript:Zm00001d040468_T001 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:major facilitator superfamily defense1 description: major facilitator superfamily defense1
Sequence

MSGGESGPAAAAAAVPLLQAPEGRTTKYYEGCPGCRLDEANKTRTGVPYLNFFYIWVVCL
AAALPVQSLFPYLYFMIRDLKVAKEEQDIGFYAGFVGATYFLGRAISAVPWGMFADKYGR
KPCIVISILSVIVFNTLFGLSTTYWMAIVTRGLLGLLCGILGPIKAYASEVCRKEHQALG
ISLVTSSRAIALVIGPAIGGFLAQPAQKYPNLFSEESIFGRFPYFLPCFVISLLAAGSCI
ACIWLPETLHFHGDDKVEAIEELEAQVRGSESTKDLHKNWQLMSAIILYCVFSMHDTAYL
EVFSLWAVSSRKFRGLSLTSQDVGTVLAISGFGVLVYQLAIYPFLAKYFGPIKTFRPAAI
LSIILLTTYPFMANLHGLELKILINIASVLKNMFATQEQRGVANGISVTLMSVFKSVAPA
AAGILFSWAQKHISGLFLPGDQILFLAINMVSVIGLVLTFKPFFSLPNPTRHS

Transcript Sequence

Transcript ID

Zm00001d040468_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:45120037:45134869:-1 gene:Zm00001d040468 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:major facilitator superfamily defense1 description: major facilitator superfamily defense1
Sequence

GTTTTGCATCTCTCTATTCATTCATCCGGCCACCACCGCTCTAACTACTCTTCAAGAGAC
GACGACCAACAGGCACGTCGATCGTCTTCCGGCGAGGGCGACGGAAGGATGTCCGGCGGC
GAGAGTGGTCCGGCAGCGGCGGCGGCGGCCGTTCCGTTGCTGCAGGCGCCGGAGGGGAGG
ACGACGAAGTACTACGAGGGATGCCCCGGGTGCCGGCTGGACGAGGCCAACAAGACTAGG
ACCGGCGTCCCCTACCTCAATTTCTTCTACATCTGGGTCGTCTGCCTCGCCGCCGCACTG
CCGGTCCAGTCACTGTTCCCTTATCTATACTTCATGATCAGGGACTTGAAAGTGGCGAAA
GAGGAGCAAGACATTGGGTTTTATGCTGGTTTTGTTGGGGCTACCTATTTCCTTGGAAGG
GCCATCAGCGCCGTGCCATGGGGCATGTTCGCTGACAAGTATGGAAGGAAGCCATGCATT
GTGATCAGCATCCTCTCAGTGATTGTGTTCAACACACTGTTTGGACTTAGCACAACTTAC
TGGATGGCAATTGTGACTAGGGGATTACTTGGGTTGCTATGTGGCATACTTGGACCCATC
AAGGCCTATGCTTCAGAAGTCTGCAGGAAAGAGCACCAAGCTCTGGGAATCTCTCTTGTT
ACATCTTCACGAGCCATAGCTCTTGTTATTGGGCCTGCTATTGGAGGCTTCCTTGCACAG
CCTGCACAGAAGTACCCAAATCTTTTCTCTGAAGAGTCCATATTTGGAAGGTTTCCATAC
TTCCTTCCTTGCTTTGTAATATCGTTGCTAGCAGCAGGATCATGTATTGCATGCATTTGG
CTTCCGGAAACGCTACACTTTCATGGTGATGACAAAGTAGAAGCTATTGAAGAACTGGAG
GCACAAGTTCGTGGCTCCGAATCTACAAAAGATCTGCATAAGAATTGGCAATTGATGTCA
GCAATAATCCTCTACTGTGTCTTTTCTATGCATGACACAGCTTATCTTGAGGTATTTTCA
CTGTGGGCTGTGAGCAGTAGAAAATTTCGGGGGCTTAGTTTGACATCCCAGGATGTTGGT
ACTGTGCTAGCCATCTCAGGTTTTGGTGTACTTGTATACCAACTCGCTATTTATCCTTTT
CTTGCGAAGTATTTTGGACCAATCAAGACATTTCGGCCTGCCGCGATCCTGTCGATCATT
CTCCTCACTACGTACCCCTTCATGGCCAATTTACATGGCCTGGAGCTTAAAATACTCATC
AACATTGCATCTGTTTTGAAGAACATGTTTGCGACGCAAGAGCAGAGAGGCGTTGCTAAT
GGCATCTCTGTTACCCTGATGTCCGTGTTCAAATCTGTAGCTCCAGCAGCAGCAGGAATT
CTGTTCTCGTGGGCTCAGAAGCACATCAGCGGACTGTTCTTACCAGGGGATCAGATCTTG
TTCCTAGCGATAAACATGGTGTCGGTGATTGGCCTGGTGCTGACGTTCAAGCCATTTTTC
TCCCTACCGAATCCAACGAGGCATTCATAAATCTGTGTAGATGAAGCCCGTTCCTGTGAA
TTGTATCGATGCACTGCCTGATTACAGTTGGGTTTCAAACTGCAAGAATTCATGACTTCA
TGTATTGTTGTGTGGTCCATACTTTTAGTCTTATGATGATGAATTAGGTAATATAATAAT
AATATATGAAGGGTTTGAGCTCTTTCGT