Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d040408_T003
CDS Infomation	cds chromosome:B73_RefGen_v4:3:41714129:41721654:1 gene:Zm00001d040408 gene_biotype:protein_coding transcript_biotype:protein_coding description:Rab escort protein 1
Sequence	ATGGCGGAGGCGGCTGCCGATTCCTCCAACTCGGCCGTCGATGGCGGCGGCAGTAACGTC CAAAACGACTATCCCACCATTGACCCCACCTCGTTCGACGTGGTGCTCTGCGGCACGGGC CTCCCGGAATCTGTCCTCGCCGCCGCCTGCGCCGCCGTTGGGAAGACGGTCCTCCACGTT GATCCCAGCCCGTTCTACGGCTCCCTCTACTCTTCCATCCCCCTCTCCTCCCTCACCTCC TTCCTATCCCCTGAGGCCTCCCCTCCCACCTCGTCCGCGGCGGCCGCCGCCTCTGATTCG CGCACCGTCGTCGATCTCCACCGACGGAGCGTGTACTCCGATGTTGAGACTTCGGGGACG GTGCCAGAGCCGGCTAGGCGGTTCACCGTTGACATGGTGGGACCTCGTGTGCTGTACTGC GCCGATGAGGCAGTGGACCTCCTCCTGCGGTCAGGGGGCAGCCACCATGTGGAGTTCAAG AGCGTGGAGGGGGGCAGTCTCCTCTACTGGGAGGGCTGCCTCTACCCGGTGCCAGACTCG AGGCAGGCCATCTTCAAGGACACCACACTCAAGCTCAAGGAGAAGAACATCCTCTTCAGG TTCTTCAAGCTTGTGCAGGCACACATTGCTGCAGCATCAGCTTCATCTGATGAGACGGGA CAGGGGGATGCATCTACCAAGATACCCGAGGAGGACCTAGATCTCCCCTTTGTTGAGTTC CTCAAGAAACAAGGGCTTCCTCCCAAGATGAGAGCGGTTGTGCTGTATGCAATTGCCATG GTGGATTATGATCAAGATGGTGCTGACCCTTGTGACAAACTGACTACAACAAGGGAGGGA ATTCAGACCATTGCTTTGTACTCCTCGTCCATTGGAAGGTTTGCTAATGCAGAAGGCGCT TTCATTTATCCTATGTATGGGCATGCTGAGCTGCCTCAAGCTTTTTGTCGCTGTGCTGCG GTTAAGGGTGCCCTATATGTGTTGCGGATGCCAGTGGTTGCACTTCTTATGGATGAGGAA AAGAAGCATTTCTTAGGTGCCAGATTGGCATCTGGTCAGGATATTTTGTGCCAGCAATTG ATAATTGACGCGTCTTATAAGATTCCTACCTTGGATGTCCCATTTGATGGTTCAGATTCT TGGAAAGTTGTGAGGGGGGTATGCATAATTAGCAAGTCCGTGAAACAGGGATCATCAAAT GTTCTGGTTATTTTCCCTCCAAAATCGCTAGAAGAACAGCAGGTTGCAGCGGTTCGGCTT CTTCAGTTGAGCAGCAATCTCGCAGTATGCCCTCCTGGGATGTTTATATCATATCTGTCT ACTCCCTGTACCGATGTCTCAGCCGGAAAGCAATCCATAAAAAAAGCAATAGACACTCTT TTCAGTCCTCAGGCTTCAGATGGTTCAGAAGGCCATTTTGAAACCACCAATGAAAGCACT GAGGATGTGAAGCCAACACTAATCTGGAGCTGTTTGTATGTTCAGGAGATCACACAGGGA ACATCTGGTTCTTTATTGTCATGCCCCATGCCTGATGAATACCTGGACTACAGAAACGTA CTGGGATCAACAAAAAAGTTATTTGCAAGTATCTATCCTGATGAAGAGTTCTTGCCTAAA AAGTCAGCTCCTGTATATGCTGATGATGCCTCTGATTCTGCAGAGTAA

Peptide Sequence

PEP ID	Zm00001d040408_P003
PEP Infomation	pep chromosome:B73_RefGen_v4:3:41714129:41721654:1 gene:Zm00001d040408 transcript:Zm00001d040408_T003 gene_biotype:protein_coding transcript_biotype:protein_coding description:Rab escort protein 1
Sequence	MAEAAADSSNSAVDGGGSNVQNDYPTIDPTSFDVVLCGTGLPESVLAAACAAVGKTVLHV DPSPFYGSLYSSIPLSSLTSFLSPEASPPTSSAAAAASDSRTVVDLHRRSVYSDVETSGT VPEPARRFTVDMVGPRVLYCADEAVDLLLRSGGSHHVEFKSVEGGSLLYWEGCLYPVPDS RQAIFKDTTLKLKEKNILFRFFKLVQAHIAAASASSDETGQGDASTKIPEEDLDLPFVEF LKKQGLPPKMRAVVLYAIAMVDYDQDGADPCDKLTTTREGIQTIALYSSSIGRFANAEGA FIYPMYGHAELPQAFCRCAAVKGALYVLRMPVVALLMDEEKKHFLGARLASGQDILCQQL IIDASYKIPTLDVPFDGSDSWKVVRGVCIISKSVKQGSSNVLVIFPPKSLEEQQVAAVRL LQLSSNLAVCPPGMFISYLSTPCTDVSAGKQSIKKAIDTLFSPQASDGSEGHFETTNEST EDVKPTLIWSCLYVQEITQGTSGSLLSCPMPDEYLDYRNVLGSTKKLFASIYPDEEFLPK KSAPVYADDASDSAE

Transcript Sequence

Transcript ID	Zm00001d040408_T003
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:41714129:41721654:1 gene:Zm00001d040408 gene_biotype:protein_coding transcript_biotype:protein_coding description:Rab escort protein 1
Sequence	AATGTTCGAGATGAAGATAGTCTAACTAGTCTACAAACAGGCGTTCCTCAGCGCGCTCTT GCAGGCCGATAGTGGCACGGGTTCGCGATTGGGCGGCAGCGTGCTGCGACGACGGGAGGT AGTGTGCCGCCAGCACGGTGAACTGCCGCTCGTTGTTGCGGTACTCTATTGATCCCTAGA TTTCACAACGAACATGGCGGAGGCGGCTGCCGATTCCTCCAACTCGGCCGTCGATGGCGG CGGCAGTAACGTCCAAAACGACTATCCCACCATTGACCCCACCTCGTTCGACGTGGTGCT CTGCGGCACGGGCCTCCCGGAATCTGTCCTCGCCGCCGCCTGCGCCGCCGTTGGGAAGAC GGTCCTCCACGTTGATCCCAGCCCGTTCTACGGCTCCCTCTACTCTTCCATCCCCCTCTC CTCCCTCACCTCCTTCCTATCCCCTGAGGCCTCCCCTCCCACCTCGTCCGCGGCGGCCGC CGCCTCTGATTCGCGCACCGTCGTCGATCTCCACCGACGGAGCGTGTACTCCGATGTTGA GACTTCGGGGACGGTGCCAGAGCCGGCTAGGCGGTTCACCGTTGACATGGTGGGACCTCG TGTGCTGTACTGCGCCGATGAGGCAGTGGACCTCCTCCTGCGGTCAGGGGGCAGCCACCA TGTGGAGTTCAAGAGCGTGGAGGGGGGCAGTCTCCTCTACTGGGAGGGCTGCCTCTACCC GGTGCCAGACTCGAGGCAGGCCATCTTCAAGGACACCACACTCAAGCTCAAGGAGAAGAA CATCCTCTTCAGGTTCTTCAAGCTTGTGCAGGCACACATTGCTGCAGCATCAGCTTCATC TGATGAGACGGGACAGGGGGATGCATCTACCAAGATACCCGAGGAGGACCTAGATCTCCC CTTTGTTGAGTTCCTCAAGAAACAAGGGCTTCCTCCCAAGATGAGAGCGGTTGTGCTGTA TGCAATTGCCATGGTGGATTATGATCAAGATGGTGCTGACCCTTGTGACAAACTGACTAC AACAAGGGAGGGAATTCAGACCATTGCTTTGTACTCCTCGTCCATTGGAAGGTTTGCTAA TGCAGAAGGCGCTTTCATTTATCCTATGTATGGGCATGCTGAGCTGCCTCAAGCTTTTTG TCGCTGTGCTGCGGTTAAGGGTGCCCTATATGTGTTGCGGATGCCAGTGGTTGCACTTCT TATGGATGAGGAAAAGAAGCATTTCTTAGGTGCCAGATTGGCATCTGGTCAGGATATTTT GTGCCAGCAATTGATAATTGACGCGTCTTATAAGATTCCTACCTTGGATGTCCCATTTGA TGGTTCAGATTCTTGGAAAGTTGTGAGGGGGGTATGCATAATTAGCAAGTCCGTGAAACA GGGATCATCAAATGTTCTGGTTATTTTCCCTCCAAAATCGCTAGAAGAACAGCAGGTTGC AGCGGTTCGGCTTCTTCAGTTGAGCAGCAATCTCGCAGTATGCCCTCCTGGGATGTTTAT ATCATATCTGTCTACTCCCTGTACCGATGTCTCAGCCGGAAAGCAATCCATAAAAAAAGC AATAGACACTCTTTTCAGTCCTCAGGCTTCAGATGGTTCAGAAGGCCATTTTGAAACCAC CAATGAAAGCACTGAGGATGTGAAGCCAACACTAATCTGGAGCTGTTTGTATGTTCAGGA GATCACACAGGGAACATCTGGTTCTTTATTGTCATGCCCCATGCCTGATGAATACCTGGA CTACAGAAACGTACTGGGATCAACAAAAAAGTTATTTGCAAGTATCTATCCTGATGAAGA GTTCTTGCCTAAAAAGTCAGCTCCTGTATATGCTGATGATGCCTCTGATTCTGCAGAGTA AAACCATCTTTCTAAAGGGCTTTATCATTTGGTTGAAGAACGCCGTCATTCGAAGATGCA GGAAGGCATCGTTCTCTTTCTCGTGGTGTTCCTTGAAGATCAGAGGGCAAATGAGCGTCG CAAGGGGGAGCCTTTGGGTTTGATGAGCAGATGTGCTGGATTTCCAATGTACAGGTGGCC ACTGGCTGGTCATATTGCATTTGTGGGGAACAGTTGGAGGGAGGGATGTGCACATGTGGT ATTCACGAAATGCTATGTGGACACATTCTGGCGATGCTCGCAAATGACCTTGTATTGGCT GCCTGGCTGGCAAACCTTGTTGTACACAGGATCACAGCAAATACGGGATACATGCTGAAC GCTCGATATGATTCCCTAGTTAAGACATTTGAATGAGACAGGGTAGAAGGGTATTCAATT GACTTCTTTCTCTGACTTCAGTCCAGCTCGATACATGTGGATTAAGATGAATACTAGAAT ACCTAAACAAAGCCTGGAGGTAATTAAACTGTTGCGTGTATTTTTGGTAGACTAAAGCGG TGAGATTTTGGTCTTCACCTTGCAGAATTGGGTACCCTTGCACGAGCCTATGTAATGTGT TTTTTTATGGATTAGTCTTTTTTCGCAACAGTTTTTTTATTTGTTGATGATTTATGAAAC ATCGGTGTTGCAT