Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Zea mays ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d040383_T005
CDS Infomation	cds chromosome:B73_RefGen_v4:3:40873830:40877067:-1 gene:Zm00001d040383 gene_biotype:protein_coding transcript_biotype:protein_coding description:Whole genome shotgun sequence of line PN40024 scaffold_123.assembly12x (Fragment)
Sequence	ATGAACTGCGCGGTGGCGTGGTCTCCCCCCTCATCCGCTCTCGTCCACCGTCCCGGCCGT GTACGCAGGTGGCGCTCCTCCGTCCGGCCCTGCGCGGCGGCCGTGGAGCAGGAGGGCGGC GCCGCGGGGGAGGCCCCGCGGCTGGTGCTGCACGACTCCCTCGACTCCGTGGGGGTGGCC ACCGCGCACGCTAGGGCGGCGCGGGAGGGGTTCGTGGCGCAGGTGGGGCGGCTCACCCGG GTAAGTGCGGGGAGCAGCATCGCCATCAGCCGCGGCCCTGACCTCGCCCGCGCAGCGCTC TGCGTCGCTGCCGAGGACGACTCGCTCGTCTCCCACTCCTCGGTCCCGCTCCCCGTAGAT GCCTTCATCGCGCGCCTCGACGACCTCTCCACGGGCTTCTGCGCCGGCGGGAACTTCCCG CCCTCGGGTGCGCCGCCCGAGGTCTTCTTCGATTACCTTAACCGCTACCTCTACGTCCAT AAGGGGTTTCGGAGAACAAATGGAGTGTCAGATGTGCGGATTATGTACCTTCACTCGGTC TTGACATGCCGTTCTGGATCAGCTCTAATGCTTGCGTTAATATATTCAGAGATATTGAAG ACTGTACGAACATATGGCTTACTGGATTTTGATGCAGAGATTTTCTTTCCAAATGATCTC AATAGCCTCCCTAGGGGCTATGACAAACAAAAAAGCAAATTGGTCGATGAGCCACATATT ATGACTTCAAAGTCACTTTTGGTTGAGACTTTGAGAACTTTGAAGTGTGCATTTTGGCCA TTTCAATCTGATCAGTCTAGTAGCTTATTTCTAAATGCTGTTGCTGCAAACCAGCGTGGC CCTGGTACTTTAGGTGATAACCAAGCGAGGTCATATGGGAACACAAGTGCCATTGAGATG GCTGCTGCTAAAGCTGCTCAGCATAGATTGATGCGTGGAGTATGGACTAATGCTCGTTTT GGTGATATGCGTCGTGCTTTAGCAGCTTGTGAGCGACTGATACTACTGCATCACGATCCG CATGAACTGAGGGATTATGCAGCCCTTCTGTACCACTGTGGGTACTATGAAGACTGCCTA CACTACTTATCATTGTACCAAACTGCAAAGTCTGGGAAATCCCCAACCAATCGATTGGAG ATCTTGGAGGACGAAGCTGTGAATACTCTCAAAGCGCGGTTAATGCTTATTTTAGCAGAG GATGGCTGGAGCAGATGTAGACCTGTGGCAAGGTACTGGACCAAGAACTCTGAGCCGTGG TAA

Peptide Sequence

PEP ID	Zm00001d040383_P005
PEP Infomation	pep chromosome:B73_RefGen_v4:3:40873830:40877067:-1 gene:Zm00001d040383 transcript:Zm00001d040383_T005 gene_biotype:protein_coding transcript_biotype:protein_coding description:Whole genome shotgun sequence of line PN40024 scaffold_123.assembly12x (Fragment)
Sequence	MNCAVAWSPPSSALVHRPGRVRRWRSSVRPCAAAVEQEGGAAGEAPRLVLHDSLDSVGVA TAHARAAREGFVAQVGRLTRVSAGSSIAISRGPDLARAALCVAAEDDSLVSHSSVPLPVD AFIARLDDLSTGFCAGGNFPPSGAPPEVFFDYLNRYLYVHKGFRRTNGVSDVRIMYLHSV LTCRSGSALMLALIYSEILKTVRTYGLLDFDAEIFFPNDLNSLPRGYDKQKSKLVDEPHI MTSKSLLVETLRTLKCAFWPFQSDQSSSLFLNAVAANQRGPGTLGDNQARSYGNTSAIEM AAAKAAQHRLMRGVWTNARFGDMRRALAACERLILLHHDPHELRDYAALLYHCGYYEDCL HYLSLYQTAKSGKSPTNRLEILEDEAVNTLKARLMLILAEDGWSRCRPVARYWTKNSEPW

Transcript Sequence

Transcript ID	Zm00001d040383_T005
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:40873830:40877067:-1 gene:Zm00001d040383 gene_biotype:protein_coding transcript_biotype:protein_coding description:Whole genome shotgun sequence of line PN40024 scaffold_123.assembly12x (Fragment)
Sequence	GAATCTGACTCACCGCTGCCGCCATGAACTGCGCGGTGGCGTGGTCTCCCCCCTCATCCG CTCTCGTCCACCGTCCCGGCCGTGTACGCAGGTGGCGCTCCTCCGTCCGGCCCTGCGCGG CGGCCGTGGAGCAGGAGGGCGGCGCCGCGGGGGAGGCCCCGCGGCTGGTGCTGCACGACT CCCTCGACTCCGTGGGGGTGGCCACCGCGCACGCTAGGGCGGCGCGGGAGGGGTTCGTGG CGCAGGTGGGGCGGCTCACCCGGGTAAGTGCGGGGAGCAGCATCGCCATCAGCCGCGGCC CTGACCTCGCCCGCGCAGCGCTCTGCGTCGCTGCCGAGGACGACTCGCTCGTCTCCCACT CCTCGGTCCCGCTCCCCGTAGATGCCTTCATCGCGCGCCTCGACGACCTCTCCACGGGCT TCTGCGCCGGCGGGAACTTCCCGCCCTCGGGTGCGCCGCCCGAGGTCTTCTTCGATTACC TTAACCGCTACCTCTACGTCCATAAGGGGTTTCGGAGAACAAATGGAGTGTCAGATGTGC GGATTATGTACCTTCACTCGGTCTTGACATGCCGTTCTGGATCAGCTCTAATGCTTGCGT TAATATATTCAGAGATATTGAAGACTGTACGAACATATGGCTTACTGGATTTTGATGCAG AGATTTTCTTTCCAAATGATCTCAATAGCCTCCCTAGGGGCTATGACAAACAAAAAAGCA AATTGGTCGATGAGCCACATATTATGACTTCAAAGTCACTTTTGGTTGAGACTTTGAGAA CTTTGAAGTGTGCATTTTGGCCATTTCAATCTGATCAGTCTAGTAGCTTATTTCTAAATG CTGTTGCTGCAAACCAGCGTGGCCCTGGTACTTTAGGTGATAACCAAGCGAGGTCATATG GGAACACAAGTGCCATTGAGATGGCTGCTGCTAAAGCTGCTCAGCATAGATTGATGCGTG GAGTATGGACTAATGCTCGTTTTGGTGATATGCGTCGTGCTTTAGCAGCTTGTGAGCGAC TGATACTACTGCATCACGATCCGCATGAACTGAGGGATTATGCAGCCCTTCTGTACCACT GTGGGTACTATGAAGACTGCCTACACTACTTATCATTGTACCAAACTGCAAAGTCTGGGA AATCCCCAACCAATCGATTGGAGATCTTGGAGGACGAAGCTGTGAATACTCTCAAAGCGC GGTTAATGCTTATTTTAGCAGAGGATGGCTGGAGCAGATGTAGACCTGTGGCAAGGTACT GGACCAAGAACTCTGAGCCGTGGTAATTAGAGCTGGCCAACGTTGCGGCTGAAGCAAATA ACTACAGATTGTACATAGCATTTTCAACTGTGGATATGTTGTACAGTCACTTGGTAATCC ATGCGGGATGTGAATCAAATTCCTAATTT