Plant GARDEN
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d040342_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:3:39030992:39040579:1 gene:Zm00001d040342 gene_biotype:protein_coding transcript_biotype:protein_coding description:Anaphase-promoting complex subunit 5
Sequence

ATGAACTTGTTCGCGGGGGTCGGCGGCGGGGCGGCGGACGGTGGCGGCACAGGCACGGCG
CTCCTGGAGCTGACGCCGCACAAGATGGCGGTGTGCCACCTCGTGCAGGTCTTTGCGCCG
GCGGCGCAGGCCGGGGGCGACGTCGTGCCGCCCTTCCCCTTCGAGTCCCTCACTCACCAC
AACCGCCTCGGACTCTTCCTGTTTACGCTCACCCGGTCATGCGATGATTTTCTGGAGCCT
CCACTGGAAGAATTTTTGAAGCAGCTGAGGGCAGTGGATGATTTGACTAATGGTTGGTTC
TGCGAGCAGCTGACAAGTGCCCTGTCAGCACTCAACTCACCTGATGACTTGTTCAACTTC
TTTGATAAGCTACGAGGTGTGTTCACTGCACCAGAGGGTGCGAGTGCAGAAGATGTATTC
TTGGATCCAAATAGCCAACTTGGAGTATTTCTTCGTTGCTGCATACTTGCCTTCAACTCA
ATGACCTTTGAGGGTGTATGCCATCTGTTGGCAGATCTTGTCATGTACTGTAACTCTGCT
GATGCTTCATATGACCTGGCAGAACATGAGGACTTCAATAGTGAAATGGGCAACTTGATG
GATGCAGACATAGGTTCGCACGCTGGTATATTTGACAAATTTCATCAGGGTTATGCCTCT
GAGCATCATATGGGGGAGAGTTCTTCAACTTTAACTCGTGCATCAATGTCACCCTATGAC
TTTGACAACGCTAATACTTTTAAAGCAGATGACAACCCAACCTGTCTGAGATCAAGGTGG
CAATTAGAGGCATATCTTAACCAACAAGCTGATATTCTTGAGAAGGATCCTGGATCAGTG
CCTTTGAATTTATTTAATGCCACTATGACACAGCTTCAAACATTAGCTCCGGAGCTTCAT
CGTGTTCAATTCTTGCAGTACTTGAATGCTCTTTACCATGATGACTATGTTGCTTCACTG
GATAATCTTCACCGCTACTTTGATTACAGTGCAGGGATGCAAGGACTTTTTGGTCGTTCT
CTGTCTCAGGTGCAAGATATTGTTGTTGGAAAGTATGAGAGTGCTCTGCTATGCTTAGGC
AACTTGCATTGTTACTTTGGACATCCTAAGAAAGCCCTAGAGGCATTTGCAGAAGCAGTC
CGTGTTTCTCAAATGAATAATGATGATTCATGCCTTGCCTATGTATTAGGAGCCATTTCT
AATCTATTATCAAAGATAGGCATCTCAAACACAGTTGGAATAATCAGTTCTCCATATTCA
CTTGGGACCAATATTGGACTAGGCACACCATTATCCATTCAGCAACAGTTACTTGTTCTT
TTAAAGCGATCACTCAAGAGAGCTGATGCATTGAAACTTCCAAGTTTACTATCCTTTGAT
CACCTTTCGCTTGCAAAATTTGATCTGAAGCATGTCCAAAGGCCACTAGTCTCTTTCGGC
CCTAATGCATCTACAAAGCTTAGAACATGTCCTGCAGATGTCTGTAAGAATCTAAGGTTA
GGTTCCCGTGTGTTGACTGACTTTGGAGCAGATGTTCTATCTACTTCAAATGATAATGGT
AGTTTTAGCACTTCTTGGCTTAGGAATCTATCCGCCACTTCTGATTCATGGCGTAGCAGT
TCAAAGAACACCAAAAAAATACATATTAATGACTTCGACAATTTCCATTATCATGCACAA
CCAAGTCCAGTACCTGCATCAATATTGCAATTAGCTGGCTCAGCATATTTGCTGAGAGCT
ACCGCTTGGGAGCACTATGGGAGTGCTCCAATGGTACGAATGAATGTTCTAGTTTATGCA
ACCTGCTTTGCGGATGCTGCAAGTTCATCAGAGTTATCACTAGCATATGTTAAGCTAATT
CAACAACTGGCGGTGTTCAAAGGATATTCAGCTGCATTCTGTGCTCTAAAGCTTGCTGAA
AAGAAGTTCCCATCCTCAACAAGTTTACACATCCAGCTTCTAGGAATGCAGATTCTACAT
GAGCGCGCACTTCATCGAGGGCATCTAAAAGTCGCGCAACAAATCTGTGATGAGTTTGGG
GTGTTATCATCTTCTGTTTCTGGAGTAGACATTGAGCTAAAGACAGAATTTAGTGTACGG
CGTGCTCGCACTCTCCTTGCCGCAAAACAGTTTAGCCAGGCCGCAGCTGTGGCCAATTCT
CTTTTCTCTACGTGCTACAAGTACAACATGCAGGTTGAGAATGCAAGTGTTCTTTTATTA
CTTGCTGAAATACATAAAAAATCTGACAATGCGGTACTTGGGCTTCCTTATGCGTTGGCC
AGCCAATCATTCTGCAAATCATTCAACTTGGATCTGCTTGAAGCCTCAGCTACACTTACT
CTCGCTGAGTTGTGGCTGGATCTTGGATCAAGCCATGCAAAGAAGGCACTGAGTCTTGTC
TACCAGAGCCTTCCCATGATTCTTGGTCATGGTGGGCTTGAGCTGCGTGCTCGAGCTCAC
GTTGTTTTAGCAAAGTGCCATTTATCCGATCTGAAATTCTCAGTTCTCGAAGATCCTGAA
GCTGTTTTGGATCCTCTGAACCAAGCCACTGAAGACCTGCAAGCATTGGAGTACCACGAG
ATGGCAGCAGAGGCGTACTATCTGAAGGCAATGGCATACAACCATCTCGGCAAGCTTGAT
GAGAGGGAGGAAGCCGCGGCTCGTTTCAAGGATCACGTCACTGCCCTTGAGACCCCGCAT
AACGAAGAGGACTCGCTTAAGTACTGA

Peptide Sequence

PEP ID

Zm00001d040342_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:3:39030992:39040579:1 gene:Zm00001d040342 transcript:Zm00001d040342_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Anaphase-promoting complex subunit 5
Sequence

MNLFAGVGGGAADGGGTGTALLELTPHKMAVCHLVQVFAPAAQAGGDVVPPFPFESLTHH
NRLGLFLFTLTRSCDDFLEPPLEEFLKQLRAVDDLTNGWFCEQLTSALSALNSPDDLFNF
FDKLRGVFTAPEGASAEDVFLDPNSQLGVFLRCCILAFNSMTFEGVCHLLADLVMYCNSA
DASYDLAEHEDFNSEMGNLMDADIGSHAGIFDKFHQGYASEHHMGESSSTLTRASMSPYD
FDNANTFKADDNPTCLRSRWQLEAYLNQQADILEKDPGSVPLNLFNATMTQLQTLAPELH
RVQFLQYLNALYHDDYVASLDNLHRYFDYSAGMQGLFGRSLSQVQDIVVGKYESALLCLG
NLHCYFGHPKKALEAFAEAVRVSQMNNDDSCLAYVLGAISNLLSKIGISNTVGIISSPYS
LGTNIGLGTPLSIQQQLLVLLKRSLKRADALKLPSLLSFDHLSLAKFDLKHVQRPLVSFG
PNASTKLRTCPADVCKNLRLGSRVLTDFGADVLSTSNDNGSFSTSWLRNLSATSDSWRSS
SKNTKKIHINDFDNFHYHAQPSPVPASILQLAGSAYLLRATAWEHYGSAPMVRMNVLVYA
TCFADAASSSELSLAYVKLIQQLAVFKGYSAAFCALKLAEKKFPSSTSLHIQLLGMQILH
ERALHRGHLKVAQQICDEFGVLSSSVSGVDIELKTEFSVRRARTLLAAKQFSQAAAVANS
LFSTCYKYNMQVENASVLLLLAEIHKKSDNAVLGLPYALASQSFCKSFNLDLLEASATLT
LAELWLDLGSSHAKKALSLVYQSLPMILGHGGLELRARAHVVLAKCHLSDLKFSVLEDPE
AVLDPLNQATEDLQALEYHEMAAEAYYLKAMAYNHLGKLDEREEAAARFKDHVTALETPH
NEEDSLKY

Transcript Sequence

Transcript ID

Zm00001d040342_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:39030992:39040579:1 gene:Zm00001d040342 gene_biotype:protein_coding transcript_biotype:protein_coding description:Anaphase-promoting complex subunit 5
Sequence

CTTTCTCTCTGCCGGTGGCGGGCGGAGCCATGAACTTGTTCGCGGGGGTCGGCGGCGGGG
CGGCGGACGGTGGCGGCACAGGCACGGCGCTCCTGGAGCTGACGCCGCACAAGATGGCGG
TGTGCCACCTCGTGCAGGTCTTTGCGCCGGCGGCGCAGGCCGGGGGCGACGTCGTGCCGC
CCTTCCCCTTCGAGTCCCTCACTCACCACAACCGCCTCGGACTCTTCCTGTTTACGCTCA
CCCGGTCATGCGATGATTTTCTGGAGCCTCCACTGGAAGAATTTTTGAAGCAGCTGAGGG
CAGTGGATGATTTGACTAATGGTTGGTTCTGCGAGCAGCTGACAAGTGCCCTGTCAGCAC
TCAACTCACCTGATGACTTGTTCAACTTCTTTGATAAGCTACGAGGTGTGTTCACTGCAC
CAGAGGGTGCGAGTGCAGAAGATGTATTCTTGGATCCAAATAGCCAACTTGGAGTATTTC
TTCGTTGCTGCATACTTGCCTTCAACTCAATGACCTTTGAGGGTGTATGCCATCTGTTGG
CAGATCTTGTCATGTACTGTAACTCTGCTGATGCTTCATATGACCTGGCAGAACATGAGG
ACTTCAATAGTGAAATGGGCAACTTGATGGATGCAGACATAGGTTCGCACGCTGGTATAT
TTGACAAATTTCATCAGGGTTATGCCTCTGAGCATCATATGGGGGAGAGTTCTTCAACTT
TAACTCGTGCATCAATGTCACCCTATGACTTTGACAACGCTAATACTTTTAAAGCAGATG
ACAACCCAACCTGTCTGAGATCAAGGTGGCAATTAGAGGCATATCTTAACCAACAAGCTG
ATATTCTTGAGAAGGATCCTGGATCAGTGCCTTTGAATTTATTTAATGCCACTATGACAC
AGCTTCAAACATTAGCTCCGGAGCTTCATCGTGTTCAATTCTTGCAGTACTTGAATGCTC
TTTACCATGATGACTATGTTGCTTCACTGGATAATCTTCACCGCTACTTTGATTACAGTG
CAGGGATGCAAGGACTTTTTGGTCGTTCTCTGTCTCAGGTGCAAGATATTGTTGTTGGAA
AGTATGAGAGTGCTCTGCTATGCTTAGGCAACTTGCATTGTTACTTTGGACATCCTAAGA
AAGCCCTAGAGGCATTTGCAGAAGCAGTCCGTGTTTCTCAAATGAATAATGATGATTCAT
GCCTTGCCTATGTATTAGGAGCCATTTCTAATCTATTATCAAAGATAGGCATCTCAAACA
CAGTTGGAATAATCAGTTCTCCATATTCACTTGGGACCAATATTGGACTAGGCACACCAT
TATCCATTCAGCAACAGTTACTTGTTCTTTTAAAGCGATCACTCAAGAGAGCTGATGCAT
TGAAACTTCCAAGTTTACTATCCTTTGATCACCTTTCGCTTGCAAAATTTGATCTGAAGC
ATGTCCAAAGGCCACTAGTCTCTTTCGGCCCTAATGCATCTACAAAGCTTAGAACATGTC
CTGCAGATGTCTGTAAGAATCTAAGGTTAGGTTCCCGTGTGTTGACTGACTTTGGAGCAG
ATGTTCTATCTACTTCAAATGATAATGGTAGTTTTAGCACTTCTTGGCTTAGGAATCTAT
CCGCCACTTCTGATTCATGGCGTAGCAGTTCAAAGAACACCAAAAAAATACATATTAATG
ACTTCGACAATTTCCATTATCATGCACAACCAAGTCCAGTACCTGCATCAATATTGCAAT
TAGCTGGCTCAGCATATTTGCTGAGAGCTACCGCTTGGGAGCACTATGGGAGTGCTCCAA
TGGTACGAATGAATGTTCTAGTTTATGCAACCTGCTTTGCGGATGCTGCAAGTTCATCAG
AGTTATCACTAGCATATGTTAAGCTAATTCAACAACTGGCGGTGTTCAAAGGATATTCAG
CTGCATTCTGTGCTCTAAAGCTTGCTGAAAAGAAGTTCCCATCCTCAACAAGTTTACACA
TCCAGCTTCTAGGAATGCAGATTCTACATGAGCGCGCACTTCATCGAGGGCATCTAAAAG
TCGCGCAACAAATCTGTGATGAGTTTGGGGTGTTATCATCTTCTGTTTCTGGAGTAGACA
TTGAGCTAAAGACAGAATTTAGTGTACGGCGTGCTCGCACTCTCCTTGCCGCAAAACAGT
TTAGCCAGGCCGCAGCTGTGGCCAATTCTCTTTTCTCTACGTGCTACAAGTACAACATGC
AGGTTGAGAATGCAAGTGTTCTTTTATTACTTGCTGAAATACATAAAAAATCTGACAATG
CGGTACTTGGGCTTCCTTATGCGTTGGCCAGCCAATCATTCTGCAAATCATTCAACTTGG
ATCTGCTTGAAGCCTCAGCTACACTTACTCTCGCTGAGTTGTGGCTGGATCTTGGATCAA
GCCATGCAAAGAAGGCACTGAGTCTTGTCTACCAGAGCCTTCCCATGATTCTTGGTCATG
GTGGGCTTGAGCTGCGTGCTCGAGCTCACGTTGTTTTAGCAAAGTGCCATTTATCCGATC
TGAAATTCTCAGTTCTCGAAGATCCTGAAGCTGTTTTGGATCCTCTGAACCAAGCCACTG
AAGACCTGCAAGCATTGGAGTACCACGAGATGGCAGCAGAGGCGTACTATCTGAAGGCAA
TGGCATACAACCATCTCGGCAAGCTTGATGAGAGGGAGGAAGCCGCGGCTCGTTTCAAGG
ATCACGTCACTGCCCTTGAGACCCCGCATAACGAAGAGGACTCGCTTAAGTACTGAGACC
CAAGACCATTTGTTATTGGCAAGCATGCCCCACTGCCAGAGACTAAAGAGGGCGTGGTGG
CCTTCTGGACCCGCATGGTGGCACTGGCAGGCTACAATGCTACACTGAGGCGAATGGCGT
TTGCTGCCATGCGGAGGCACTGCCACTGACTGTGGGCGGACCGGCGGACGGCGGTGACTG
AAGGAGACGGGCAGCCGGTGAGGTCAATGTGCTAGTTGGGTCAGCGTGGTATGGTCTCAT
CCATGGACCATGGTGTTCATTAGAGCGAGACGAAGACATCAGATTGAGACTTGATGTTCT
TACTCTGTTCTTATCGACTTCTCTGCTCTGTTACTGGGGAGTTCCGAATTGCTAACTCAG
ACAGACAGTGCTGACAATGTGTTTGTGTTTGAATGTAAACAGAACAAGAACAGAAAAATA
GAAGATTGATCTGTATTTTCCCTTGA