Gene sequences

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Trait-Related Loci

Zea mays

CDS Sequence

CDS ID	Zm00001d040279_T023
CDS Infomation	cds chromosome:B73_RefGen_v4:3:35510886:35520117:-1 gene:Zm00001d040279 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:topless-related1 description: topless-related1
Sequence	ATGTCGTCGCTCAGCCGCGAGCTCGTCTTCCTCATCCTGCAGTTCCTCGACGAGGAGAAG TTCAAGGAGACCGTGCACAAGCTTGAGCAAGAGTCAGGGTTCTTCTTCAATATGAAGTAC TTCGAGGAGAAGGTCCATGCTGGGGAGTGGGATGAGGTGGAGAGATACTTGTCAGGATTC ACCAAGGTAGATGACAATAGGTATTCGATGAAGATCTTCTTTGAGATCAGGAAGCAGAAG TATTTGGAAGCGCTTGATAGGCATGATAGAGCAAAGGCTGTAGATATTCTTGTCAAGGAT CTTAAAGTCTTCTCGACATTCAATGAGGAGTTGTATAAGGAGATAACACAACTTCTCACT CTTGAGAATTTTAGGGAAAATGAACAGTTGTCTAAGTATGGGGATACTAAATCAGCTCGA AGTATTATGCTGGTTGAGCTAAAAAAACTTATTGAAGCAAACCCCCTTTTCCGGGAAAAA CTTGTCTTCCCTACTCTTAAGGCATCACGCCTCCGAACTCTAATCAATCAAAGCTTGAAT TGGCAGCATCAGCTTTGTAAGAACCCTCGTCCAAATCCAGATATCAAAACTTTATTCACC GACCATACATGTTCTCCACCCAATGGAGCTCGTGCATCGCCGGTATCTGTACCACTGGCA GCTGTTCCAAAGGCTGGTGCTGCATATCCACCACTCACAGCTCATACTCCGTTCCAACCT CCACCTGGTCCATCTTTAGCTGGTTGGATGGCAAATGCAGCCGCCTCTTCATCTGTTCAG TCTGCTGTTGTAGCAGCAGCATCAATACCTGTTCCACCCAATCAAGCTGTCTCCATGTTG AAACGCCCAGCTCTAACAGACTATCAAAGTGCAGAGTCTGAGCAACTAATGAAGCGCTTG AGGCCTGGTGGACATGGCATTGATGAGGCCACATATCCTGCTCCCACCCCTCAACCTGCA TGGTCAGTGGATGATCTTCCAAGGACAGTTGCTTGTTCATTGTCACATGGATCTAATGTA ACTAGCATGGATTTTCATCCAACTCGGCATACACTGCTTCTAGTGGGATCTGCTAATGGT GAATTTACACTTTATGAGATCGGTCTGCGTGAAACATTACTTTCAAAGCCCTTCAAAATT CGGGATATAAATGCATGTTCACCACAATTTCAGAATGCTGTTGTCAAAGATTCCTCCATA TCCATTAATCAAGTTACCTGGAGCCCTGATGGAGAAATGATTGGCGTTGCATTCACGAAA CATTTGATCCATCTGCATGGATACCAACCACCAAATGAGACACGACACCTTCTAGAGATT GAGGCTCATTCTGGAGGTGTAAATGATATAGCATTCTCCCGACCAAATAAGCAACTTTGT GTGGTCACTTGTGGAGATGATAAACTAATAAAGGTATGGGATATGCATGGACATAAATTA TTCACATTTGAAGGGCATGAGGCACCTGTGTATTCTATATGTCCGCATCACAAAGAGAGT ATTCAGTTCATCTTCTCAACTTCCCTTGATGGAAAAATTAAGGCCTGGCTTTATGACAAT ATGGGATCTAGGGTGGACTACGATGCTCCTGGCAAGTGGTGTACTACTATGCTATATAGT GCTGATGGAACTAGGTTGTTCTCATGTGGAACTAGCAAAGAGGGAGACTCCTATTTGGTT GAGTGGAATGAAAGTGAAGGATCTATCAAGAGGACATATTCTGGATTCCGTAAAAGGTCA GCTGGTGTTGCTGGTGTAGTGCAGTTTGATACAGCTCAGAATCACATTCTGGCTGCTGGT GAAGATAACCATATTAAATTTTGGGATGTTGACAATAATAACATGCTGATCTGCACCGAT GCTGAAGGAGGCCTCCCAGCTCTTCCTCGCTTGAGGTTTAATAAAGAAGGCAATCTTCTT GCTGTTACTACAGCAGACAATGGTTTTAAGATACTTGCAAATGCTGATGGACTTAGAACT CTACGCGCATTAGGGAGCCGGCCTCCTTTTGAAGCATTTAGGCCGCAATACGAAGCTTCT TCTATGAAGGTCTCAGGTGCTCCTGTTGTTGCTAGCATCTCTCCTAACATAGGCCGAATG GATCACTTGGATAGGAATTCTCCTGCAAAGCCATCTCCTATACTGAATGGTGGGGATACA GCATCAAGGAGCATAGATATAAAGCCAAGAATCTCAGAAGAAAAGCCTGATAAAGCAAAA CCTTGGGAACTAATGGAAGTTCTAAATCCCCAGCAATGCCATGTAGCAACAATGCCAGAA ACTCCAGACCAAGCCAGAAAGGTTGTCCGACTTCTGTACACAAATTCTGGTGTTGGGTTG CTAGCACTAGGGTCTAACGCCATTCAAAGGCTATGGAAATGGAGTCGAAACGAACAAAAT CCGAGTGGAAAAGCCACAGCTAGTGTTGTGCCACACCATTGGCAGCCAAATAGTGGTCTT GTCATGACAAATGATACAGCAGATACCAATCCAGAGGAGGCAGTTCCATGCATTGCACTC TCAAAGAATGATTCCTATGTGATGTCTGCTTGTGGTGGGAAGGTTTCTTTGTTTAACATG ATGACATTCAAGGTGATGACAACATTCATGCCACCTCCACCAGCATCAACATTTTTAGCA TTTCACCCTCAAGACAATAACATCATAGCAATAGGAATGGAAGATTCAACCATCCACATA TACAATGTCAGGGTAGATGAGGTAAAAACTAGACTCAAAGGACATCAAAGGAGGATAACT GGGTTGGCATTCTCCACCAACCTTGGCATACTTGTTTCTTCAGGCGCTGATGCACAGCTC TGTGTGTGGACCAATGACACCTGGGAAAAAAAGAGAACAGTCTCGATACAAATGCCAGCT GGAAAAACTCCTTCAGGAGATACACGGGTCCAGTTTAGTTCTGATCAAAGTCACTTGCTA GTAGTACATGAGACTCAACTAGCCATATATGACGCATCAAAAATGGAGAGGATCTATCAG TGGATACCCCAGGACACATTGTCAGCTTCCATATCGCATGCATCATACTCATGTAACAGC CAGCTAGTTTTTGCTGCCTTCACTGATGGTAACTTAGGTGTTTTTGATGCGGAGAACTTG AGATTAAGATGTCGAATTGCACCATCGGTGATAAACAGCAATCCACCTGTTCACCCTCTT GTCGTCGCCGCACATCCCCACGAGCCAAACCAATTTGCGGTCGGGCTGTCAGATGGGTCC GTCAAAGTGCTGGAGCCATTGGAGTCCGAAGGGAAATGGGGAGCGCCCGCTCCGGCAGAC AATGGCATCATTCCCAATGGCAAGACGCCAGCTTCGTCGGCTACTAGCAACCCTGCTGCG GATCAAATCCAAAGATAG

Peptide Sequence

PEP ID	Zm00001d040279_P023
PEP Infomation	pep chromosome:B73_RefGen_v4:3:35510886:35520117:-1 gene:Zm00001d040279 transcript:Zm00001d040279_T023 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:topless-related1 description: topless-related1
Sequence	MSSLSRELVFLILQFLDEEKFKETVHKLEQESGFFFNMKYFEEKVHAGEWDEVERYLSGF TKVDDNRYSMKIFFEIRKQKYLEALDRHDRAKAVDILVKDLKVFSTFNEELYKEITQLLT LENFRENEQLSKYGDTKSARSIMLVELKKLIEANPLFREKLVFPTLKASRLRTLINQSLN WQHQLCKNPRPNPDIKTLFTDHTCSPPNGARASPVSVPLAAVPKAGAAYPPLTAHTPFQP PPGPSLAGWMANAAASSSVQSAVVAAASIPVPPNQAVSMLKRPALTDYQSAESEQLMKRL RPGGHGIDEATYPAPTPQPAWSVDDLPRTVACSLSHGSNVTSMDFHPTRHTLLLVGSANG EFTLYEIGLRETLLSKPFKIRDINACSPQFQNAVVKDSSISINQVTWSPDGEMIGVAFTK HLIHLHGYQPPNETRHLLEIEAHSGGVNDIAFSRPNKQLCVVTCGDDKLIKVWDMHGHKL FTFEGHEAPVYSICPHHKESIQFIFSTSLDGKIKAWLYDNMGSRVDYDAPGKWCTTMLYS ADGTRLFSCGTSKEGDSYLVEWNESEGSIKRTYSGFRKRSAGVAGVVQFDTAQNHILAAG EDNHIKFWDVDNNNMLICTDAEGGLPALPRLRFNKEGNLLAVTTADNGFKILANADGLRT LRALGSRPPFEAFRPQYEASSMKVSGAPVVASISPNIGRMDHLDRNSPAKPSPILNGGDT ASRSIDIKPRISEEKPDKAKPWELMEVLNPQQCHVATMPETPDQARKVVRLLYTNSGVGL LALGSNAIQRLWKWSRNEQNPSGKATASVVPHHWQPNSGLVMTNDTADTNPEEAVPCIAL SKNDSYVMSACGGKVSLFNMMTFKVMTTFMPPPPASTFLAFHPQDNNIIAIGMEDSTIHI YNVRVDEVKTRLKGHQRRITGLAFSTNLGILVSSGADAQLCVWTNDTWEKKRTVSIQMPA GKTPSGDTRVQFSSDQSHLLVVHETQLAIYDASKMERIYQWIPQDTLSASISHASYSCNS QLVFAAFTDGNLGVFDAENLRLRCRIAPSVINSNPPVHPLVVAAHPHEPNQFAVGLSDGS VKVLEPLESEGKWGAPAPADNGIIPNGKTPASSATSNPAADQIQR

Transcript Sequence

Transcript ID	Zm00001d040279_T023
Transcript Infomation	cdna chromosome:B73_RefGen_v4:3:35510886:35520117:-1 gene:Zm00001d040279 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:topless-related1 description: topless-related1
Sequence	CTCTCTCCCCCAACCTTCTCTTCCACATCTCCGCTTCTCTCTCGCCTCCGCTTCGCTTCG CGAGAGACGGGCCGACGACGGAACCCTAGGATTCGCGCCCGCCTGAGCGGCCAAGCCACC AGGACCGCGCCCTCCGGACCCGGGGGCGCCAGACAAGCTCCGGGGCGCGCGGATCGACCA CTGGCCGGCTTACCGCCGCCGCTGCCATGTCGTCGCTCAGCCGCGAGCTCGTCTTCCTCA TCCTGCAGTTCCTCGACGAGGAGAAGTTCAAGGAGACCGTGCACAAGCTTGAGCAAGAGT CAGGGTTCTTCTTCAATATGAAGTACTTCGAGGAGAAGGTCCATGCTGGGGAGTGGGATG AGGTGGAGAGATACTTGTCAGGATTCACCAAGGTAGATGACAATAGGTATTCGATGAAGA TCTTCTTTGAGATCAGGAAGCAGAAGTATTTGGAAGCGCTTGATAGGCATGATAGAGCAA AGGCTGTAGATATTCTTGTCAAGGATCTTAAAGTCTTCTCGACATTCAATGAGGAGTTGT ATAAGGAGATAACACAACTTCTCACTCTTGAGAATTTTAGGGAAAATGAACAGTTGTCTA AGTATGGGGATACTAAATCAGCTCGAAGTATTATGCTGGTTGAGCTAAAAAAACTTATTG AAGCAAACCCCCTTTTCCGGGAAAAACTTGTCTTCCCTACTCTTAAGGCATCACGCCTCC GAACTCTAATCAATCAAAGCTTGAATTGGCAGCATCAGCTTTGTAAGAACCCTCGTCCAA ATCCAGATATCAAAACTTTATTCACCGACCATACATGTTCTCCACCCAATGGAGCTCGTG CATCGCCGGTATCTGTACCACTGGCAGCTGTTCCAAAGGCTGGTGCTGCATATCCACCAC TCACAGCTCATACTCCGTTCCAACCTCCACCTGGTCCATCTTTAGCTGGTTGGATGGCAA ATGCAGCCGCCTCTTCATCTGTTCAGTCTGCTGTTGTAGCAGCAGCATCAATACCTGTTC CACCCAATCAAGCTGTCTCCATGTTGAAACGCCCAGCTCTAACAGACTATCAAAGTGCAG AGTCTGAGCAACTAATGAAGCGCTTGAGGCCTGGTGGACATGGCATTGATGAGGCCACAT ATCCTGCTCCCACCCCTCAACCTGCATGGTCAGTGGATGATCTTCCAAGGACAGTTGCTT GTTCATTGTCACATGGATCTAATGTAACTAGCATGGATTTTCATCCAACTCGGCATACAC TGCTTCTAGTGGGATCTGCTAATGGTGAATTTACACTTTATGAGATCGGTCTGCGTGAAA CATTACTTTCAAAGCCCTTCAAAATTCGGGATATAAATGCATGTTCACCACAATTTCAGA ATGCTGTTGTCAAAGATTCCTCCATATCCATTAATCAAGTTACCTGGAGCCCTGATGGAG AAATGATTGGCGTTGCATTCACGAAACATTTGATCCATCTGCATGGATACCAACCACCAA ATGAGACACGACACCTTCTAGAGATTGAGGCTCATTCTGGAGGTGTAAATGATATAGCAT TCTCCCGACCAAATAAGCAACTTTGTGTGGTCACTTGTGGAGATGATAAACTAATAAAGG TATGGGATATGCATGGACATAAATTATTCACATTTGAAGGGCATGAGGCACCTGTGTATT CTATATGTCCGCATCACAAAGAGAGTATTCAGTTCATCTTCTCAACTTCCCTTGATGGAA AAATTAAGGCCTGGCTTTATGACAATATGGGATCTAGGGTGGACTACGATGCTCCTGGCA AGTGGTGTACTACTATGCTATATAGTGCTGATGGAACTAGGTTGTTCTCATGTGGAACTA GCAAAGAGGGAGACTCCTATTTGGTTGAGTGGAATGAAAGTGAAGGATCTATCAAGAGGA CATATTCTGGATTCCGTAAAAGGTCAGCTGGTGTTGCTGGTGTAGTGCAGTTTGATACAG CTCAGAATCACATTCTGGCTGCTGGTGAAGATAACCATATTAAATTTTGGGATGTTGACA ATAATAACATGCTGATCTGCACCGATGCTGAAGGAGGCCTCCCAGCTCTTCCTCGCTTGA GGTTTAATAAAGAAGGCAATCTTCTTGCTGTTACTACAGCAGACAATGGTTTTAAGATAC TTGCAAATGCTGATGGACTTAGAACTCTACGCGCATTAGGGAGCCGGCCTCCTTTTGAAG CATTTAGGCCGCAATACGAAGCTTCTTCTATGAAGGTCTCAGGTGCTCCTGTTGTTGCTA GCATCTCTCCTAACATAGGCCGAATGGATCACTTGGATAGGAATTCTCCTGCAAAGCCAT CTCCTATACTGAATGGTGGGGATACAGCATCAAGGAGCATAGATATAAAGCCAAGAATCT CAGAAGAAAAGCCTGATAAAGCAAAACCTTGGGAACTAATGGAAGTTCTAAATCCCCAGC AATGCCATGTAGCAACAATGCCAGAAACTCCAGACCAAGCCAGAAAGGTTGTCCGACTTC TGTACACAAATTCTGGTGTTGGGTTGCTAGCACTAGGGTCTAACGCCATTCAAAGGCTAT GGAAATGGAGTCGAAACGAACAAAATCCGAGTGGAAAAGCCACAGCTAGTGTTGTGCCAC ACCATTGGCAGCCAAATAGTGGTCTTGTCATGACAAATGATACAGCAGATACCAATCCAG AGGAGGCAGTTCCATGCATTGCACTCTCAAAGAATGATTCCTATGTGATGTCTGCTTGTG GTGGGAAGGTTTCTTTGTTTAACATGATGACATTCAAGGTGATGACAACATTCATGCCAC CTCCACCAGCATCAACATTTTTAGCATTTCACCCTCAAGACAATAACATCATAGCAATAG GAATGGAAGATTCAACCATCCACATATACAATGTCAGGGTAGATGAGGTAAAAACTAGAC TCAAAGGACATCAAAGGAGGATAACTGGGTTGGCATTCTCCACCAACCTTGGCATACTTG TTTCTTCAGGCGCTGATGCACAGCTCTGTGTGTGGACCAATGACACCTGGGAAAAAAAGA GAACAGTCTCGATACAAATGCCAGCTGGAAAAACTCCTTCAGGAGATACACGGGTCCAGT TTAGTTCTGATCAAAGTCACTTGCTAGTAGTACATGAGACTCAACTAGCCATATATGACG CATCAAAAATGGAGAGGATCTATCAGTGGATACCCCAGGACACATTGTCAGCTTCCATAT CGCATGCATCATACTCATGTAACAGCCAGCTAGTTTTTGCTGCCTTCACTGATGGTAACT TAGGTGTTTTTGATGCGGAGAACTTGAGATTAAGATGTCGAATTGCACCATCGGTGATAA ACAGCAATCCACCTGTTCACCCTCTTGTCGTCGCCGCACATCCCCACGAGCCAAACCAAT TTGCGGTCGGGCTGTCAGATGGGTCCGTCAAAGTGCTGGAGCCATTGGAGTCCGAAGGGA AATGGGGAGCGCCCGCTCCGGCAGACAATGGCATCATTCCCAATGGCAAGACGCCAGCTT CGTCGGCTACTAGCAACCCTGCTGCGGATCAAATCCAAAGATAGATTGTATTCCCTAAGC TTTTCTTTTTCTGCAAACTTTCTAATTACACTGACTTATTTGTATGTGGATGCCGTTAGG ATATTATCGTCATTTGTT