Plant GARDEN
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TOP > About the Species(Zea mays ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Zea mays

CDS Sequence

CDS ID

Zm00001d040215_T001
CDS Infomation

cds chromosome:B73_RefGen_v4:3:32388537:32391284:-1 gene:Zm00001d040215 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chaperone protein dnaJ 20 chloroplastic
Sequence

ATGCCCCACCTCGCCGCCACTCCCCCCACTTCCTCCGCCGCCGCCGTCCCCGCCGCGGGC
CGCATCGCGTTCCGGCGCCCGTGGAACACGCCACAGCCGGAAGCGCTGCGCCTGCGCCTC
CGCCTGCGCGCGCGGGGCGTCCGGCGTGAGGACGGCGGCGGCGTGCGCACGGAGGAGCAG
GAGCAGACAGCACCGCGGACGTTCTACGACCTGCTCGGGATCTCAGCGGATGGGAGCCCC
GATGATGTTCGGGCGTCCTACAGGCGGCTGGCGCTAAAGTACCACCCAGACGTGTCCCCT
CCGGGCGCCGCGGCCGAGAACACGCGCCGCTTCATCGAGGTGCAGGAGGCCTACGAGACG
CTCTCCGACCCAAGCCGCCGCGCCAGCTACGACCGTGCACTCGCCCGCGGCGTCTGCCGC
CTCGCCTTCTCCGGGCGCCGTTCCCAATCCCACCACGCCTACTACCATTACCAGGAACAG
GAAGAGGGATCTGGGTGGAGAAGGTCCTGGGAGGACCAGATCGCCGAGCTGAAGAGGAGG
AGCGTGGCGAAGGATTCAGAAGAGAACCTGTCGTGGGGCGCTCGCATGCGGAGAAGGGCC
GAGGCGTCAGCAGCGGAGTAG

Peptide Sequence

PEP ID

Zm00001d040215_P001
PEP Infomation

pep chromosome:B73_RefGen_v4:3:32388537:32391284:-1 gene:Zm00001d040215 transcript:Zm00001d040215_T001 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chaperone protein dnaJ 20 chloroplastic
Sequence

MPHLAATPPTSSAAAVPAAGRIAFRRPWNTPQPEALRLRLRLRARGVRREDGGGVRTEEQ
EQTAPRTFYDLLGISADGSPDDVRASYRRLALKYHPDVSPPGAAAENTRRFIEVQEAYET
LSDPSRRASYDRALARGVCRLAFSGRRSQSHHAYYHYQEQEEGSGWRRSWEDQIAELKRR
SVAKDSEENLSWGARMRRRAEASAAE

Transcript Sequence

Transcript ID

Zm00001d040215_T001
Transcript Infomation

cdna chromosome:B73_RefGen_v4:3:32388537:32391284:-1 gene:Zm00001d040215 gene_biotype:protein_coding transcript_biotype:protein_coding description:Chaperone protein dnaJ 20 chloroplastic
Sequence

AAGATCTGCGGAAAGCAAACCGCACTGAGAAACCAAACCAGCAAGCGAAGCCCAGCAAGA
AAACCACATGCCCCACCTCGCCGCCACTCCCCCCACTTCCTCCGCCGCCGCCGTCCCCGC
CGCGGGCCGCATCGCGTTCCGGCGCCCGTGGAACACGCCACAGCCGGAAGCGCTGCGCCT
GCGCCTCCGCCTGCGCGCGCGGGGCGTCCGGCGTGAGGACGGCGGCGGCGTGCGCACGGA
GGAGCAGGAGCAGACAGCACCGCGGACGTTCTACGACCTGCTCGGGATCTCAGCGGATGG
GAGCCCCGATGATGTTCGGGCGTCCTACAGGCGGCTGGCGCTAAAGTACCACCCAGACGT
GTCCCCTCCGGGCGCCGCGGCCGAGAACACGCGCCGCTTCATCGAGGTGCAGGAGGCCTA
CGAGACGCTCTCCGACCCAAGCCGCCGCGCCAGCTACGACCGTGCACTCGCCCGCGGCGT
CTGCCGCCTCGCCTTCTCCGGGCGCCGTTCCCAATCCCACCACGCCTACTACCATTACCA
GGAACAGGAAGAGGGATCTGGGTGGAGAAGGTCCTGGGAGGACCAGATCGCCGAGCTGAA
GAGGAGGAGCGTGGCGAAGGATTCAGAAGAGAACCTGTCGTGGGGCGCTCGCATGCGGAG
AAGGGCCGAGGCGTCAGCAGCGGAGTAGCTGCGACAAGCGAGCCTTCCAAATGCAGCTGT
ACTCGTACGTAGCATGTGGAGCGAAGCGAAACGGAATATATTTTTCTGGTGGGTACAATT
TGGTCTGCAAGGTTTTTAAGGCGTGGATCTAAAGATGTCCAGATGGAAACCTTCAGAGAC
AGACCTGTTACGAGAATTGGACGTGTAGCAGTAGTAGCTGTAGCGGTGGCATCTGGCCAG
GATTGAGGAGGAACAGCAGCACCTGGATGGAGTGTGGTGGCTGCTGGCTGCAGACCAACA
CCCTTGGCCCTGGCTACATAATAGTTGAGTTCCTGCCTGGCCACCTGGGCCTGGCTGGCT
GTATGTAAACGACTCAACTATGTTACTCCTTGAGACTCCTGTTACATCTGTGGCAGGTCC
AGTGTAAATGTAAATACTACAAGCATCAATAACGAAGGAGCAAGCCAGTTGTTCTTCCAA
TA